| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008253
Identifier: 150008253
GI number: 150008253
Start: 1905418
End: 1906998
Strand: Direct
Name: 150008253
Synonym: BDI_1622
Alternate gene names: NA
Gene position: 1905418-1906998 (Clockwise)
Preceding gene: 150008252
Following gene: 150008262
Centisome position: 39.6
GC content: 42.69
Gene sequence:
>1581_bases ATGAAAAAAATATCAACAATTGCGGTTGCCTGTGCCGGGTTATTGAGCTTTACGGCTTGTAACAACTTTTTGGACGAAGA GCCTAAGTCAACATTGACTGATGTCGCATACTATAAGACACAATCTCAAATGGAATCTAATGTAAACTATTTGTATCGTA CGGGTGCGATCGGTAGTTATGTGGATTTCGGTAGTGCTTATATCGGGCCTTTCGCTTCTATTCAAGAAGAATTGACAGGA TATTTCTCTAATTCTTATGAAGGACAGGAAATAGTTTGCCGTTATACCAGAGAATTGACCCGTCAACAAAACACGATGCA GTTAGCATCTAAGATGGACAAGGTTTGGGATGACTGCTATCGCGGAATTAACGTGGCAAATGGAGCGATTAAGCATATGC CAGAGGTACCTATGGATCAGGCTACTGCAGATCGCTTGACGGCTGAGGCTAAGTTTTTCCGTGCTTTCAACTATTTTTAC TTAGTAAAGACTTTCGGAGCGGTTCCATTCTATACAGATCCCTATGAGCTGGCTGAGAACATGGAGCTTCCCCGTACGGA AACCTCAACCATCTATAACCAAATCGAAAGCGATTTGAAGGATGCTATGAATGTATTGCCAGAGGCTACTTTCGCCGCTA ATGGTCATCGTATCACGAAGTATGTGGCCGCTATGACGCTGACTGATGTTTATATGTATCAGCATAAATATGCAGAGGCT GCTGAAACTGTGCGTATTGTCGTTAATTCAAATCATAAATTAACAACAAATGATGATTTGGCGATGAATAGCGCATTTAA CAAATTGCGTTCTACAGATGACTTGGATGAGGCTATCTATGCCTATGAGTATGATAATCAGATTAGTCCGAGTAACTGGT TACCTACTTATGCTTTTGATGGTGACGCTTCTAGTAACGGTTTGTTTGGAACATATGCCATCACCCAGAAAGTACATGGA CCGAATGACCGTTATCTGAATATTTATGAATCAAACGATTTACGTCGTCAACCGAATCAGTTCTACCACTGGACTTATAC AAATCCAAAAACTGGAAAGGTTTGGAATTCTGTAGGTAACGCTGCTTGTTGTTGGTATTATTACGATGAGGATGCCTTAC TTACTACAGGTCGTGGCACAAAAGACTGGAACGTATATCGTTATGCTGAAGCTTTATTGGACGCTGCAGAGTCAATCGCT CAATCAACTGGAGTGACTGCTGAAGCGGCCGGCTATTTGGCTCAAGTGAAGGCTCGTGCGAATATGGAAGGTAAAACCGC TGCGGAGATTGCATCATCTTTACAAAGTATGGGTAAACAAGCCTTCATCGAAGAGTGTTGGACTGAGCGTCTACGTGAGT TGCCTTTGGAATTTAAGATGTGGGATATGTGTGTACGTACAGGCATGTTCCCGAATATTTCCGAGACAACCCCGGGACAA GTAACCTACATTCCGTTAGTGGGTGCTAAGAACGCATCTGGAGCAACAATCAAAGAATCCGACCTATTATGGCCGTTATC CGTGAACGAGATCCAGCGTAACCCGAGTCTGACTCAGAATGAGGGATATTCTGCAAAGTAA
Upstream 100 bases:
>100_bases GGGCAGAACATGACATTCTTCTCATATCCGAGAGCTAGGACATTTACATTTGGTGTTAATGTAACATTTTAATTAATCTC ATTAAATTAGACATTAAAAA
Downstream 100 bases:
>100_bases TATTTTTTATTTTAATAACTGATGGTTTTAAAGGGGAGGATGAGTTTTTCATTCTCCTCTTTTTCATTGTCCTCTCTTTT CGATTTGTCTGGCGATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSYVDFGSAYIGPFASIQEELTG YFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCYRGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFY LVKTFGAVPFYTDPYELAENMELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFDGDASSNGLFGTYAITQKVHG PNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGNAACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIA QSTGVTAEAAGYLAQVKARANMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK
Sequences:
>Translated_526_residues MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSYVDFGSAYIGPFASIQEELTG YFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCYRGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFY LVKTFGAVPFYTDPYELAENMELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFDGDASSNGLFGTYAITQKVHG PNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGNAACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIA QSTGVTAEAAGYLAQVKARANMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK >Mature_526_residues MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSYVDFGSAYIGPFASIQEELTG YFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCYRGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFY LVKTFGAVPFYTDPYELAENMELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFDGDASSNGLFGTYAITQKVHG PNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGNAACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIA QSTGVTAEAAGYLAQVKARANMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59264; Mature: 59264
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSY CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH VDFGSAYIGPFASIQEELTGYFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCY HHCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFYLVKTFGAVPFYTDPYELAEN CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC MELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFD HCEEEEEEECCCEECCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCEEEC GDASSNGLFGTYAITQKVHGPNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGN CCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCC AACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIAQSTGVTAEAAGYLAQVKARA EEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC NMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK EEEEEEEECCCCCCCEEECCCCEECCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKISTIAVACAGLLSFTACNNFLDEEPKSTLTDVAYYKTQSQMESNVNYLYRTGAIGSY CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH VDFGSAYIGPFASIQEELTGYFSNSYEGQEIVCRYTRELTRQQNTMQLASKMDKVWDDCY HHCCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGINVANGAIKHMPEVPMDQATADRLTAEAKFFRAFNYFYLVKTFGAVPFYTDPYELAEN CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC MELPRTETSTIYNQIESDLKDAMNVLPEATFAANGHRITKYVAAMTLTDVYMYQHKYAEA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AETVRIVVNSNHKLTTNDDLAMNSAFNKLRSTDDLDEAIYAYEYDNQISPSNWLPTYAFD HCEEEEEEECCCEECCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCEEEC GDASSNGLFGTYAITQKVHGPNDRYLNIYESNDLRRQPNQFYHWTYTNPKTGKVWNSVGN CCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCC AACCWYYYDEDALLTTGRGTKDWNVYRYAEALLDAAESIAQSTGVTAEAAGYLAQVKARA EEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC NMEGKTAAEIASSLQSMGKQAFIEECWTERLRELPLEFKMWDMCVRTGMFPNISETTPGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC VTYIPLVGAKNASGATIKESDLLWPLSVNEIQRNPSLTQNEGYSAK EEEEEEEECCCCCCCEEECCCCEECCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA