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The map label for this gene is asdII [H]

Identifier: 150008198

GI number: 150008198

Start: 1830432

End: 1831967

Strand: Direct

Name: asdII [H]

Synonym: BDI_1564

Alternate gene names: 150008198

Gene position: 1830432-1831967 (Clockwise)

Preceding gene: 150008196

Following gene: 150008199

Centisome position: 38.04

GC content: 47.72

Gene sequence:

>1536_bases
ATGAAGAAACTAATAATCAGCGTTTGGGCATTTATCGCCCTTCCTTTATTCGCTCAACGAGACGCGAATATCCGTATTTA
TCTGGAGCAAGGTAACCAACAGATCAGTAAACATATTTACGGGCAATTCGCCGAACATCTAGGGAGTTGTATCTACGGTG
GCTTATGGGTGGGACCAGAGTCCGACATCCCTAATACCCAAGGATACCGTACGGATGTCTTAAACGCGTTGAAGAAACTA
CAGATCCCGAACTTACGTTGGCCGGGCGGTTGCTTCGCCGACGAATATCATTGGATGGATGGAATCGGCCCCAAGGAAAA
TCGCCCGAAAATGGTGAATAATAACTGGGGAGGGACGATTGAGGATAATAGTTTTGGAACCCATGAGTTCTTGAATCTAT
GTGAGTTATTAGGTTGTGAGCCTTACATCAGCGGAAACGTGGGAAGCGGTACGGTTGAGGAAATGGCTAAATGGGTGGAA
TACATGACCTCGGAAGGAGACAGCCCTATGGCCAACCTACGCCGGAAAAATGGCCGGGATAAGGCATGGAAAGTCAAGTT
TTTCGGCGTTGGGAACGAGAGTTGGGGATGCGGGGGCAGTATGCGACCGGAATATTATTCCGACCTTTACCGTCGTTACT
CTACGTATTGCCGTAACTATGATAGCAATGTCTTGTTCAAGATCGCCAGCGGTGCCAGCGATTATGATTACAACTGGACC
GAGACGCTGATGAAACAAATCGGCGGACGCATGGATGGTATCTCTTTACATTATTATACAGTAGGAGATTGGAACAATAA
AGGCTCCGCTACCGATTTCAACACGGAGGATTATTACTGGACCTTAGGAAAATGCCTTGAGATAGAGGATGTCGTTAAAA
AGCATATCGCTATCATGGATAAATACGACCCGAAGAAAAATATAGCCCTCATGGTAGACGAATGGGGTACTTGGTGGGAT
GTGGAACCCGGTACGATCCCCGGCCATCTGTTCCAGCAAAACACGATGCGCGACGCTTTCGTAGCCGCTCTTACCCTACA
TGTCTTCCACAAATATACGGATCGGGTAAAAATGGCCAATATCGCACAGATTGTCAATGTATTGCAATCCATGATCCTCA
CGAAAGGCAAGGACATGGTGCTTACGCCTACTTACCATGTGTTCGAGATGTACAAGGTTCATCAAGACGCTACCTTTTTG
CCGATGGACTTAATCTGCGACAAGGAGAAAGTAAGAGACAACCGGGAAGTGCCGGTCGTAAGCGCCTCCGCATCCCGGGA
TTCGCAGGGTAAAATCCATATCTCGTTGGCGAACGTAGATCCCCGGCAAAGCGAGAACATCCATATCGACCTGCAAAACG
TAACGATAAAGAGCGTGAACGGGCGTATCCTGACAGCGTCCTCCATAAACGACTATAACACATTCGATTCGCCGGAGAAG
GTCAAGCCGGAAGTTTTCAAGGGAGCCAAGGTGGAAAAGGGAAAGTTAAGCGTCAGCCTGCCTCCCATGTCGATCGTCGT
ATTAGAAGTTTTATAA

Upstream 100 bases:

>100_bases
ATGTACGACTTTTTCCGAAAACACGTACGTGTTTTTCGAACGATAAAAGGATTTATATATTCAAGAATAAGTGTATCTTT
GCCAATAAATCATTTATATC

Downstream 100 bases:

>100_bases
AAAGACGGACAATAACATGGCAATGTTTCTATAATTATTAACTTTGCCCGAAGAATTAAAAAACACATTAAAGAAACGCA
TTATGAAACCTACATTATTT

Product: alpha-L-arabinofuranosidase

Products: NA

Alternate protein names: Arabinosidase 2 [H]

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKKLIISVWAFIALPLFAQRDANIRIYLEQGNQQISKHIYGQFAEHLGSCIYGGLWVGPESDIPNTQGYRTDVLNALKKL
QIPNLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCELLGCEPYISGNVGSGTVEEMAKWVE
YMTSEGDSPMANLRRKNGRDKAWKVKFFGVGNESWGCGGSMRPEYYSDLYRRYSTYCRNYDSNVLFKIASGASDYDYNWT
ETLMKQIGGRMDGISLHYYTVGDWNNKGSATDFNTEDYYWTLGKCLEIEDVVKKHIAIMDKYDPKKNIALMVDEWGTWWD
VEPGTIPGHLFQQNTMRDAFVAALTLHVFHKYTDRVKMANIAQIVNVLQSMILTKGKDMVLTPTYHVFEMYKVHQDATFL
PMDLICDKEKVRDNREVPVVSASASRDSQGKIHISLANVDPRQSENIHIDLQNVTIKSVNGRILTASSINDYNTFDSPEK
VKPEVFKGAKVEKGKLSVSLPPMSIVVLEVL

Sequences:

>Translated_511_residues
MKKLIISVWAFIALPLFAQRDANIRIYLEQGNQQISKHIYGQFAEHLGSCIYGGLWVGPESDIPNTQGYRTDVLNALKKL
QIPNLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCELLGCEPYISGNVGSGTVEEMAKWVE
YMTSEGDSPMANLRRKNGRDKAWKVKFFGVGNESWGCGGSMRPEYYSDLYRRYSTYCRNYDSNVLFKIASGASDYDYNWT
ETLMKQIGGRMDGISLHYYTVGDWNNKGSATDFNTEDYYWTLGKCLEIEDVVKKHIAIMDKYDPKKNIALMVDEWGTWWD
VEPGTIPGHLFQQNTMRDAFVAALTLHVFHKYTDRVKMANIAQIVNVLQSMILTKGKDMVLTPTYHVFEMYKVHQDATFL
PMDLICDKEKVRDNREVPVVSASASRDSQGKIHISLANVDPRQSENIHIDLQNVTIKSVNGRILTASSINDYNTFDSPEK
VKPEVFKGAKVEKGKLSVSLPPMSIVVLEVL
>Mature_511_residues
MKKLIISVWAFIALPLFAQRDANIRIYLEQGNQQISKHIYGQFAEHLGSCIYGGLWVGPESDIPNTQGYRTDVLNALKKL
QIPNLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCELLGCEPYISGNVGSGTVEEMAKWVE
YMTSEGDSPMANLRRKNGRDKAWKVKFFGVGNESWGCGGSMRPEYYSDLYRRYSTYCRNYDSNVLFKIASGASDYDYNWT
ETLMKQIGGRMDGISLHYYTVGDWNNKGSATDFNTEDYYWTLGKCLEIEDVVKKHIAIMDKYDPKKNIALMVDEWGTWWD
VEPGTIPGHLFQQNTMRDAFVAALTLHVFHKYTDRVKMANIAQIVNVLQSMILTKGKDMVLTPTYHVFEMYKVHQDATFL
PMDLICDKEKVRDNREVPVVSASASRDSQGKIHISLANVDPRQSENIHIDLQNVTIKSVNGRILTASSINDYNTFDSPEK
VKPEVFKGAKVEKGKLSVSLPPMSIVVLEVL

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010720
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF06964 Alpha-L-AF_C [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 58068; Mature: 58068

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIISVWAFIALPLFAQRDANIRIYLEQGNQQISKHIYGQFAEHLGSCIYGGLWVGPE
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEECCC
SDIPNTQGYRTDVLNALKKLQIPNLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTI
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
EDNSFGTHEFLNLCELLGCEPYISGNVGSGTVEEMAKWVEYMTSEGDSPMANLRRKNGRD
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
KAWKVKFFGVGNESWGCGGSMRPEYYSDLYRRYSTYCRNYDSNVLFKIASGASDYDYNWT
CEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH
ETLMKQIGGRMDGISLHYYTVGDWNNKGSATDFNTEDYYWTLGKCLEIEDVVKKHIAIMD
HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHC
KYDPKKNIALMVDEWGTWWDVEPGTIPGHLFQQNTMRDAFVAALTLHVFHKYTDRVKMAN
CCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQIVNVLQSMILTKGKDMVLTPTYHVFEMYKVHQDATFLPMDLICDKEKVRDNREVPVV
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCCCCEE
SASASRDSQGKIHISLANVDPRQSENIHIDLQNVTIKSVNGRILTASSINDYNTFDSPEK
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCC
VKPEVFKGAKVEKGKLSVSLPPMSIVVLEVL
CCHHHHCCCCEECCEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MKKLIISVWAFIALPLFAQRDANIRIYLEQGNQQISKHIYGQFAEHLGSCIYGGLWVGPE
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEECCC
SDIPNTQGYRTDVLNALKKLQIPNLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTI
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
EDNSFGTHEFLNLCELLGCEPYISGNVGSGTVEEMAKWVEYMTSEGDSPMANLRRKNGRD
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
KAWKVKFFGVGNESWGCGGSMRPEYYSDLYRRYSTYCRNYDSNVLFKIASGASDYDYNWT
CEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH
ETLMKQIGGRMDGISLHYYTVGDWNNKGSATDFNTEDYYWTLGKCLEIEDVVKKHIAIMD
HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHC
KYDPKKNIALMVDEWGTWWDVEPGTIPGHLFQQNTMRDAFVAALTLHVFHKYTDRVKMAN
CCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQIVNVLQSMILTKGKDMVLTPTYHVFEMYKVHQDATFLPMDLICDKEKVRDNREVPVV
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCCCCEE
SASASRDSQGKIHISLANVDPRQSENIHIDLQNVTIKSVNGRILTASSINDYNTFDSPEK
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCC
VKPEVFKGAKVEKGKLSVSLPPMSIVVLEVL
CCHHHHCCCCEECCEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA