| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008147
Identifier: 150008147
GI number: 150008147
Start: 1768049
End: 1768546
Strand: Direct
Name: 150008147
Synonym: BDI_1513
Alternate gene names: NA
Gene position: 1768049-1768546 (Clockwise)
Preceding gene: 150008146
Following gene: 150008155
Centisome position: 36.75
GC content: 58.84
Gene sequence:
>498_bases ATGGAGATTTCTGTTTTTATACGTGAATACGCTCCGCTGGCCAGGGAGGCCGGGCGGGCGTTCCGGATCGATCCGGTGGT GATCTTGGCACAGGCGGCCATCGAGACGGGTTGGGGCGAGAGTACGCTCTGCCGGGAGTATCATAACTTTTTCGGCATCA CGGCCTACGGGCTGCCCAACGTATGGTGGACCGGCCGGTGGACGGAGCTGTCGCCCCGCTCGCTACGTTTCCGGATCTAC CCGGACGATAAGTGCTCGTTCATGGATTACTGCCGCCTGCTTCGCTCGGCCTATCCCCGGGCGGCCGACATGAGCGCCAA CCCTACGGCCTTCGCCAAGGAGATCGCTTACAGCCCCTACATCAGCGAGGTGAACGGCGATAACCGGGAAGCCTATCGTA AGCTGATCGTCCAGCTTTGCCGAAAAATCAGCTCGCAACTATCAATCGTTAATCAAAAGGGCGGGCAGATGCCGCCCCTA TCATCAACTGTCAACTAA
Upstream 100 bases:
>100_bases TACTCGAACGGAGAGGTGACCCCGGGAGGTGGCGGGGGCGATTCCGAGAGCCCGGACGAGATTTAGGGAATTGAAAATTG AGAATTGAAAATTAAGTGGT
Downstream 100 bases:
>100_bases AATGAAATACCTTGAACTCATCCTCCGTTGCCTCACGGCGCTCCTCCGGGTCATCTTCCCGCAGCATCCCCCTGTTCCCG AAACGACAGACGCTACCGGC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MEISVFIREYAPLAREAGRAFRIDPVVILAQAAIETGWGESTLCREYHNFFGITAYGLPNVWWTGRWTELSPRSLRFRIY PDDKCSFMDYCRLLRSAYPRAADMSANPTAFAKEIAYSPYISEVNGDNREAYRKLIVQLCRKISSQLSIVNQKGGQMPPL SSTVN
Sequences:
>Translated_165_residues MEISVFIREYAPLAREAGRAFRIDPVVILAQAAIETGWGESTLCREYHNFFGITAYGLPNVWWTGRWTELSPRSLRFRIY PDDKCSFMDYCRLLRSAYPRAADMSANPTAFAKEIAYSPYISEVNGDNREAYRKLIVQLCRKISSQLSIVNQKGGQMPPL SSTVN >Mature_165_residues MEISVFIREYAPLAREAGRAFRIDPVVILAQAAIETGWGESTLCREYHNFFGITAYGLPNVWWTGRWTELSPRSLRFRIY PDDKCSFMDYCRLLRSAYPRAADMSANPTAFAKEIAYSPYISEVNGDNREAYRKLIVQLCRKISSQLSIVNQKGGQMPPL SSTVN
Specific function: Unknown
COG id: COG1705
COG function: function code NU; Muramidase (flagellum-specific)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.-
Molecular weight: Translated: 18799; Mature: 18799
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISVFIREYAPLAREAGRAFRIDPVVILAQAAIETGWGESTLCREYHNFFGITAYGLPN CCEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEECCCCC VWWTGRWTELSPRSLRFRIYPDDKCSFMDYCRLLRSAYPRAADMSANPTAFAKEIAYSPY CEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC ISEVNGDNREAYRKLIVQLCRKISSQLSIVNQKGGQMPPLSSTVN HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEISVFIREYAPLAREAGRAFRIDPVVILAQAAIETGWGESTLCREYHNFFGITAYGLPN CCEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEECCCCC VWWTGRWTELSPRSLRFRIYPDDKCSFMDYCRLLRSAYPRAADMSANPTAFAKEIAYSPY CEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC ISEVNGDNREAYRKLIVQLCRKISSQLSIVNQKGGQMPPLSSTVN HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA