| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008106
Identifier: 150008106
GI number: 150008106
Start: 1714772
End: 1715851
Strand: Direct
Name: 150008106
Synonym: BDI_1470
Alternate gene names: NA
Gene position: 1714772-1715851 (Clockwise)
Preceding gene: 150008105
Following gene: 150008110
Centisome position: 35.64
GC content: 36.67
Gene sequence:
>1080_bases ATGAAAAATGTCTATGTATTTGGGACAAGAGGCTTTCCGAATGTACAAGGAGGCGTAGAGAAGCATTGTGAGCAACTTTA TCCGGAACTGACTTCTAAATATAACATTTCTATATTCAGAAGGATTCCATTCTTAAAGAAAAATGCGGAAAAGGTATATA AAGGCATACGATTCATAGATCTACCTTCTACACGAATAAAAGGGTTTGAGCCTTTTTTCCATTCATTCTTGTGCACTATA TATTGTATTATTAAGAGACCAGATATCGTACATATCCATAACATTGGTCCCGGAATGTTTATACCACTCCTTAAACTCGC TGGGTTGAAAGTTGTCCTTACGTATCATAGCGCAAACTATGAACATAAGAAATGGAATTACATATCCCGAAAAATATTAA AATTCAGCGAATGGATAGCTGTTAATGGTTCTACAGCCGTAATCTTTGTCAATAAAAAGCAAATGTGTCTTTTCAATGAT AAAATTCAGCGTAAATCCACTTATATACCGAATGGAGTATATCGCAAGCAACTAGCGACAAGGACTGATTATATAGAGAA ACTTGGGTTACAACCTCAAAAATATATTTTAGCTGTTGGACGTATTACACAGGAGAAAGGATTTGATTATCTGATTGATA GCTACGTACAATCTTTACCTCATGACTTCAAGCTCGTTTTAGCCGGAGGAGTAGACCATAACTCCTCCTATTCGTCCGAA ATCAGCGAAAGAGCCCAAAAACAGAATGTAATCATGCCCGGATATGTGGATGGAGAATTTCTAAGGCAATTATACTCCCA TGCCAGACTTTTTGTATTACCTTCTTATAATGAAGGCTTCCCATTAGTACTTTTAGAAGCGATGAGTTATCATCTACCTA TATTGGCAAGTGATATACCCGCTAATAAATTACTTGAGCTAAATCCAGGGGACTATTTCAAAACAGGGGATGCTTTGGAT CTATCTAAGCACATAAAACAAAAACTGGCTCAAGAATTTACCAGAGTTGACTATCCACTCGACGAGTATACGTGGCAGAA TGTCAGCGACAAAGTAACTACAATCTTTGACAAGATATAA
Upstream 100 bases:
>100_bases CGGATGAGGCGAAGAAATTCGCAATGGATAACTTCTCAGAAGAAAGCCATTATCAAAAACTCATCAAAAACTATCAACTC ATTATCGATCAGAATAAGCG
Downstream 100 bases:
>100_bases AAAATATCCCTCAAAATACTGTTTAGCTATTTTGAGGGATATTTTTATATAATTGGCTTTATTTCATGAGCATGTTGCGC AGCCAAACGCTGCTTCTCAG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKNVYVFGTRGFPNVQGGVEKHCEQLYPELTSKYNISIFRRIPFLKKNAEKVYKGIRFIDLPSTRIKGFEPFFHSFLCTI YCIIKRPDIVHIHNIGPGMFIPLLKLAGLKVVLTYHSANYEHKKWNYISRKILKFSEWIAVNGSTAVIFVNKKQMCLFND KIQRKSTYIPNGVYRKQLATRTDYIEKLGLQPQKYILAVGRITQEKGFDYLIDSYVQSLPHDFKLVLAGGVDHNSSYSSE ISERAQKQNVIMPGYVDGEFLRQLYSHARLFVLPSYNEGFPLVLLEAMSYHLPILASDIPANKLLELNPGDYFKTGDALD LSKHIKQKLAQEFTRVDYPLDEYTWQNVSDKVTTIFDKI
Sequences:
>Translated_359_residues MKNVYVFGTRGFPNVQGGVEKHCEQLYPELTSKYNISIFRRIPFLKKNAEKVYKGIRFIDLPSTRIKGFEPFFHSFLCTI YCIIKRPDIVHIHNIGPGMFIPLLKLAGLKVVLTYHSANYEHKKWNYISRKILKFSEWIAVNGSTAVIFVNKKQMCLFND KIQRKSTYIPNGVYRKQLATRTDYIEKLGLQPQKYILAVGRITQEKGFDYLIDSYVQSLPHDFKLVLAGGVDHNSSYSSE ISERAQKQNVIMPGYVDGEFLRQLYSHARLFVLPSYNEGFPLVLLEAMSYHLPILASDIPANKLLELNPGDYFKTGDALD LSKHIKQKLAQEFTRVDYPLDEYTWQNVSDKVTTIFDKI >Mature_359_residues MKNVYVFGTRGFPNVQGGVEKHCEQLYPELTSKYNISIFRRIPFLKKNAEKVYKGIRFIDLPSTRIKGFEPFFHSFLCTI YCIIKRPDIVHIHNIGPGMFIPLLKLAGLKVVLTYHSANYEHKKWNYISRKILKFSEWIAVNGSTAVIFVNKKQMCLFND KIQRKSTYIPNGVYRKQLATRTDYIEKLGLQPQKYILAVGRITQEKGFDYLIDSYVQSLPHDFKLVLAGGVDHNSSYSSE ISERAQKQNVIMPGYVDGEFLRQLYSHARLFVLPSYNEGFPLVLLEAMSYHLPILASDIPANKLLELNPGDYFKTGDALD LSKHIKQKLAQEFTRVDYPLDEYTWQNVSDKVTTIFDKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 41486; Mature: 41486
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVYVFGTRGFPNVQGGVEKHCEQLYPELTSKYNISIFRRIPFLKKNAEKVYKGIRFID CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEHEECCCHHHCCHHHHHCCCEEEE LPSTRIKGFEPFFHSFLCTIYCIIKRPDIVHIHNIGPGMFIPLLKLAGLKVVLTYHSANY CCCHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCEEEEEEEECCCC EHKKWNYISRKILKFSEWIAVNGSTAVIFVNKKQMCLFNDKIQRKSTYIPNGVYRKQLAT CCHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCEEEECHHHHHHCCCCCCCHHHHHHHH RTDYIEKLGLQPQKYILAVGRITQEKGFDYLIDSYVQSLPHDFKLVLAGGVDHNSSYSSE HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH ISERAQKQNVIMPGYVDGEFLRQLYSHARLFVLPSYNEGFPLVLLEAMSYHLPILASDIP HHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCEEECCCC ANKLLELNPGDYFKTGDALDLSKHIKQKLAQEFTRVDYPLDEYTWQNVSDKVTTIFDKI CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MKNVYVFGTRGFPNVQGGVEKHCEQLYPELTSKYNISIFRRIPFLKKNAEKVYKGIRFID CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEHEECCCHHHCCHHHHHCCCEEEE LPSTRIKGFEPFFHSFLCTIYCIIKRPDIVHIHNIGPGMFIPLLKLAGLKVVLTYHSANY CCCHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCEEEEEEEECCCC EHKKWNYISRKILKFSEWIAVNGSTAVIFVNKKQMCLFNDKIQRKSTYIPNGVYRKQLAT CCHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCEEEECHHHHHHCCCCCCCHHHHHHHH RTDYIEKLGLQPQKYILAVGRITQEKGFDYLIDSYVQSLPHDFKLVLAGGVDHNSSYSSE HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH ISERAQKQNVIMPGYVDGEFLRQLYSHARLFVLPSYNEGFPLVLLEAMSYHLPILASDIP HHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCEEECCCC ANKLLELNPGDYFKTGDALDLSKHIKQKLAQEFTRVDYPLDEYTWQNVSDKVTTIFDKI CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]