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The map label for this gene is ocd [H]

Identifier: 150008100

GI number: 150008100

Start: 1705439

End: 1706386

Strand: Direct

Name: ocd [H]

Synonym: BDI_1464

Alternate gene names: 150008100

Gene position: 1705439-1706386 (Clockwise)

Preceding gene: 150008098

Following gene: 150008101

Centisome position: 35.45

GC content: 39.14

Gene sequence:

>948_bases
ATGAAAATTATCTCTGAAAATCAGATTAAGGATTTAGGAATTACGCCTGCGACCTGTGTAGATTGGGCGAAAGAAAGTTT
CTCTATAAAAAACAAGGCTCAATTACCCGCAAAAATAAGTGTACACCCCCAAGGTAATGACTTTTTCACTTCCATGCCCT
GCCTCTTACCCCAAGAATTCTCTAGGTTTGGAATCAAGGTGGTTCATCGTATTGTAGGTGGCATACCTGCTTTAGGAAGC
GATATCCTACTCTATGATTCCAATACGGGAGAACTATTAGCCCTATTGGGTGGAGATTGGATAACCGCTATGCGTACAGG
AGCTGTCGCCACTCTCGCTATCCAAACATTAAAAGCGACCGATGCCACTACTTACAGTTTCATCGGCTTAGGAAATACAG
CTAGAGCAACTATGTTATGTTTACTTGATAGCCAAAAAAATACGCATCATACAGTTCAGCTATTAAAATATAAGGATCAA
GCGGATTCCTTTATAGAGAGATTCGGGGCTTATCCCAATGTTACATTCTCGATCATAGACAATATAGAGAATCTCATATC
CAACTCAGATGTTATTATCAGTTGTATAACAGACGCAAGCAACTTGATCTGTCCGAAAAATGACCTATTTAAAGAAGGAT
GCCTAGTCGTGCCGATACATACGAGAGGATTTCAAAATTGCGATCTCTTTTTCGACAAGGTATATGGCGATGATACCGAT
CATGTGAAGGGATTCCGTTATTTTTCCCAATTCAAACAATATGCCGAGCTAGAAGACGTTTTATCAGGTAGAACGGCTGG
CAGAGAAAATGACCATGAACGGATATTAAGTTACAATATAGGTCTTGGTCTACATGATATTCTATTCGCAAGTAAAATTT
ATGATAGTTTATCTGCGCAATCTCCAGAGATTAAGATAGAAAGAGAGGTATCAAAATTCTGGATATGA

Upstream 100 bases:

>100_bases
AGTGCATTTAAAAGAGATACAAAAGTAAGACTATTTCAAGAATTATACATAACTTTGGAAGCTTTTTTGGCATAAGCATG
AACTAAAAAAGGAAGTCAAT

Downstream 100 bases:

>100_bases
TATCGGTTTACATTATATGCAGCGTTTTAGATAATAGAATCATCTTATAAAGACAACCCCTTCTCGGTTATGTACAGTCA
AATTGATATTTTGACAGTAA

Product: putative ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKIISENQIKDLGITPATCVDWAKESFSIKNKAQLPAKISVHPQGNDFFTSMPCLLPQEFSRFGIKVVHRIVGGIPALGS
DILLYDSNTGELLALLGGDWITAMRTGAVATLAIQTLKATDATTYSFIGLGNTARATMLCLLDSQKNTHHTVQLLKYKDQ
ADSFIERFGAYPNVTFSIIDNIENLISNSDVIISCITDASNLICPKNDLFKEGCLVVPIHTRGFQNCDLFFDKVYGDDTD
HVKGFRYFSQFKQYAELEDVLSGRTAGRENDHERILSYNIGLGLHDILFASKIYDSLSAQSPEIKIEREVSKFWI

Sequences:

>Translated_315_residues
MKIISENQIKDLGITPATCVDWAKESFSIKNKAQLPAKISVHPQGNDFFTSMPCLLPQEFSRFGIKVVHRIVGGIPALGS
DILLYDSNTGELLALLGGDWITAMRTGAVATLAIQTLKATDATTYSFIGLGNTARATMLCLLDSQKNTHHTVQLLKYKDQ
ADSFIERFGAYPNVTFSIIDNIENLISNSDVIISCITDASNLICPKNDLFKEGCLVVPIHTRGFQNCDLFFDKVYGDDTD
HVKGFRYFSQFKQYAELEDVLSGRTAGRENDHERILSYNIGLGLHDILFASKIYDSLSAQSPEIKIEREVSKFWI
>Mature_315_residues
MKIISENQIKDLGITPATCVDWAKESFSIKNKAQLPAKISVHPQGNDFFTSMPCLLPQEFSRFGIKVVHRIVGGIPALGS
DILLYDSNTGELLALLGGDWITAMRTGAVATLAIQTLKATDATTYSFIGLGNTARATMLCLLDSQKNTHHTVQLLKYKDQ
ADSFIERFGAYPNVTFSIIDNIENLISNSDVIISCITDASNLICPKNDLFKEGCLVVPIHTRGFQNCDLFFDKVYGDDTD
HVKGFRYFSQFKQYAELEDVLSGRTAGRENDHERILSYNIGLGLHDILFASKIYDSLSAQSPEIKIEREVSKFWI

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35059; Mature: 35059

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISENQIKDLGITPATCVDWAKESFSIKNKAQLPAKISVHPQGNDFFTSMPCLLPQEF
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHCCCCCCCHHHH
SRFGIKVVHRIVGGIPALGSDILLYDSNTGELLALLGGDWITAMRTGAVATLAIQTLKAT
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHCC
DATTYSFIGLGNTARATMLCLLDSQKNTHHTVQLLKYKDQADSFIERFGAYPNVTFSIID
CCCEEEEEECCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NIENLISNSDVIISCITDASNLICPKNDLFKEGCLVVPIHTRGFQNCDLFFDKVYGDDTD
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCH
HVKGFRYFSQFKQYAELEDVLSGRTAGRENDHERILSYNIGLGLHDILFASKIYDSLSAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
SPEIKIEREVSKFWI
CCCEEEEEHHHHHCC
>Mature Secondary Structure
MKIISENQIKDLGITPATCVDWAKESFSIKNKAQLPAKISVHPQGNDFFTSMPCLLPQEF
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHCCCCCCCHHHH
SRFGIKVVHRIVGGIPALGSDILLYDSNTGELLALLGGDWITAMRTGAVATLAIQTLKAT
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHCC
DATTYSFIGLGNTARATMLCLLDSQKNTHHTVQLLKYKDQADSFIERFGAYPNVTFSIID
CCCEEEEEECCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
NIENLISNSDVIISCITDASNLICPKNDLFKEGCLVVPIHTRGFQNCDLFFDKVYGDDTD
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCH
HVKGFRYFSQFKQYAELEDVLSGRTAGRENDHERILSYNIGLGLHDILFASKIYDSLSAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
SPEIKIEREVSKFWI
CCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7873778 [H]