| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008090
Identifier: 150008090
GI number: 150008090
Start: 1693657
End: 1694958
Strand: Direct
Name: 150008090
Synonym: BDI_1454
Alternate gene names: NA
Gene position: 1693657-1694958 (Clockwise)
Preceding gene: 150008089
Following gene: 150008091
Centisome position: 35.2
GC content: 45.24
Gene sequence:
>1302_bases ATGAAAAATCGCACTTTACATTATATAATACGTTTTCTTGTAGGAGATGATGTCCCTAGCGAACTGGTGGAAACGATCGG GTACACGGCTGATCCCAATAAATTCGACCGATATAACGTCGTTATCATTCCATCCGGCTTCTTTGATGGACAAACATACG GGACTCCTGCTTCCTTACCGGAACTCCCTTTGCAAGAGGTTCAAGGTATCCCCTTGTTATTCGGCTCGCCGAAAGAGGAA TGGGTAAGAGATACATGGGTGGTTCATGCCGATATCATCGCAAGTACTTATTTTCTCATTTCCAGATACGAGGAGATGGT ACGGCGTGGACTTCGGGATGAGCATGGAAGATTTCCCGGTAAAGAGTCCTTGCCCTACCGGGCCGGTTTCCTGCATCGTC CGATCGTGGATGAATATCGCATGCTGCTTCATCGTTGGCTACGCCAATCCCGGTTACGTGTACCCGAGGTAAAAAAGCAA ATCCGGAAGATCTACCTCACGCACGACGTAGATTCTCCGACTCTATATCGTTCGTGGAAAGGTTTGATACGGTCTATTAG AGATAGAAGAGGTTTATATAAATCCTTTCAAGGTAAATTCGGTACCCTTGAGAAAGACCCGTTTTATACCTTCCCTTGGT TTTTCCGCCAGAATAGTATCCTTCAGGATTTGATCGGGAAGGAACAATGTCACCCTATCCTATTTATCCGGAACGGGGGG AAAGCCAAGCACGACAAACCTCATTACGATTTGAGGAATAAAGATATTCGTAAATTGATAAAAAGTGCTCTAGAGCATAA TGTAACTATTGGTTTGCATAGTAGCTACCAAGCGGGTACGACTCCCAGCCTTATCCGGAAAGAGAAAACCGGTCTGGAAG ATCATATCGGTAAAAATGTTCGGTTCAACCGTCATCATTTCTTGGCTATCCGGGAACCGGAAGATATGGACCAAATAGAG GCTGCTGGGGTTACGGACGATTTCACCATGGGGTATGCCGATGTCTCCGGATTCCGGTTAGGGACTTGCTACCCGGTTCG TTGGATCAATCCGATCACCCGCCGGCTATCTCCTCTCCGACTACATCCGCTTATTATAATGGATTGTACCCTAGAGGAGG AAAAATATATGGGACTGGATTTTGACAGGGCTTTAACCTATTGCCGGAATTTAGTGGAACAAGTAAATAATGTAGGAGGT GAATTGGTTTTACTATGGCATAATGACTCCGTACAAGAAGGGTCCGGAAGTTATTTACGTAAATTATACGCCCAGCTATT AAAAGAATTAGCGAAGCAGTGA
Upstream 100 bases:
>100_bases TCTTCCGCGAGTTCGGAGCTATCCAAACCCCATTTTTCACAATATCTAGGGGGAAATTGAGTTTATTAGACAGAGCACGC ATTAAACTAAGCAAATGGGT
Downstream 100 bases:
>100_bases AAACAACAAAATCCCTGTATTCAAATAAATCAGAAAGAATGATTACTAATTGTAAAAATATTTTAGTCCTCGCCCCTCAT ACGGATGATGGGGAACTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKNRTLHYIIRFLVGDDVPSELVETIGYTADPNKFDRYNVVIIPSGFFDGQTYGTPASLPELPLQEVQGIPLLFGSPKEE WVRDTWVVHADIIASTYFLISRYEEMVRRGLRDEHGRFPGKESLPYRAGFLHRPIVDEYRMLLHRWLRQSRLRVPEVKKQ IRKIYLTHDVDSPTLYRSWKGLIRSIRDRRGLYKSFQGKFGTLEKDPFYTFPWFFRQNSILQDLIGKEQCHPILFIRNGG KAKHDKPHYDLRNKDIRKLIKSALEHNVTIGLHSSYQAGTTPSLIRKEKTGLEDHIGKNVRFNRHHFLAIREPEDMDQIE AAGVTDDFTMGYADVSGFRLGTCYPVRWINPITRRLSPLRLHPLIIMDCTLEEEKYMGLDFDRALTYCRNLVEQVNNVGG ELVLLWHNDSVQEGSGSYLRKLYAQLLKELAKQ
Sequences:
>Translated_433_residues MKNRTLHYIIRFLVGDDVPSELVETIGYTADPNKFDRYNVVIIPSGFFDGQTYGTPASLPELPLQEVQGIPLLFGSPKEE WVRDTWVVHADIIASTYFLISRYEEMVRRGLRDEHGRFPGKESLPYRAGFLHRPIVDEYRMLLHRWLRQSRLRVPEVKKQ IRKIYLTHDVDSPTLYRSWKGLIRSIRDRRGLYKSFQGKFGTLEKDPFYTFPWFFRQNSILQDLIGKEQCHPILFIRNGG KAKHDKPHYDLRNKDIRKLIKSALEHNVTIGLHSSYQAGTTPSLIRKEKTGLEDHIGKNVRFNRHHFLAIREPEDMDQIE AAGVTDDFTMGYADVSGFRLGTCYPVRWINPITRRLSPLRLHPLIIMDCTLEEEKYMGLDFDRALTYCRNLVEQVNNVGG ELVLLWHNDSVQEGSGSYLRKLYAQLLKELAKQ >Mature_433_residues MKNRTLHYIIRFLVGDDVPSELVETIGYTADPNKFDRYNVVIIPSGFFDGQTYGTPASLPELPLQEVQGIPLLFGSPKEE WVRDTWVVHADIIASTYFLISRYEEMVRRGLRDEHGRFPGKESLPYRAGFLHRPIVDEYRMLLHRWLRQSRLRVPEVKKQ IRKIYLTHDVDSPTLYRSWKGLIRSIRDRRGLYKSFQGKFGTLEKDPFYTFPWFFRQNSILQDLIGKEQCHPILFIRNGG KAKHDKPHYDLRNKDIRKLIKSALEHNVTIGLHSSYQAGTTPSLIRKEKTGLEDHIGKNVRFNRHHFLAIREPEDMDQIE AAGVTDDFTMGYADVSGFRLGTCYPVRWINPITRRLSPLRLHPLIIMDCTLEEEKYMGLDFDRALTYCRNLVEQVNNVGG ELVLLWHNDSVQEGSGSYLRKLYAQLLKELAKQ
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50507; Mature: 50507
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRTLHYIIRFLVGDDVPSELVETIGYTADPNKFDRYNVVIIPSGFFDGQTYGTPASLP CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC ELPLQEVQGIPLLFGSPKEEWVRDTWVVHADIIASTYFLISRYEEMVRRGLRDEHGRFPG CCCHHHHCCCCEEECCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC KESLPYRAGFLHRPIVDEYRMLLHRWLRQSRLRVPEVKKQIRKIYLTHDVDSPTLYRSWK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHCCCCCCCHHHHHHH GLIRSIRDRRGLYKSFQGKFGTLEKDPFYTFPWFFRQNSILQDLIGKEQCHPILFIRNGG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCHHCCCEEEEEECCC KAKHDKPHYDLRNKDIRKLIKSALEHNVTIGLHSSYQAGTTPSLIRKEKTGLEDHIGKNV CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCHHHCCCCC RFNRHHFLAIREPEDMDQIEAAGVTDDFTMGYADVSGFRLGTCYPVRWINPITRRLSPLR EECCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHCHHHHCCCCCE LHPLIIMDCTLEEEKYMGLDFDRALTYCRNLVEQVNNVGGELVLLWHNDSVQEGSGSYLR ECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHH KLYAQLLKELAKQ HHHHHHHHHHHCC >Mature Secondary Structure MKNRTLHYIIRFLVGDDVPSELVETIGYTADPNKFDRYNVVIIPSGFFDGQTYGTPASLP CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC ELPLQEVQGIPLLFGSPKEEWVRDTWVVHADIIASTYFLISRYEEMVRRGLRDEHGRFPG CCCHHHHCCCCEEECCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC KESLPYRAGFLHRPIVDEYRMLLHRWLRQSRLRVPEVKKQIRKIYLTHDVDSPTLYRSWK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHCCCCCCCHHHHHHH GLIRSIRDRRGLYKSFQGKFGTLEKDPFYTFPWFFRQNSILQDLIGKEQCHPILFIRNGG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCHHCCCEEEEEECCC KAKHDKPHYDLRNKDIRKLIKSALEHNVTIGLHSSYQAGTTPSLIRKEKTGLEDHIGKNV CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCHHHCCCCC RFNRHHFLAIREPEDMDQIEAAGVTDDFTMGYADVSGFRLGTCYPVRWINPITRRLSPLR EECCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHCHHHHCCCCCE LHPLIIMDCTLEEEKYMGLDFDRALTYCRNLVEQVNNVGGELVLLWHNDSVQEGSGSYLR ECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHH KLYAQLLKELAKQ HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA