Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008073

Identifier: 150008073

GI number: 150008073

Start: 1667800

End: 1669113

Strand: Direct

Name: 150008073

Synonym: BDI_1437

Alternate gene names: NA

Gene position: 1667800-1669113 (Clockwise)

Preceding gene: 150008072

Following gene: 150008074

Centisome position: 34.66

GC content: 52.05

Gene sequence:

>1314_bases
ATGGAAGCACCTGTAATCAATGTGGGAATCATGACCCACAAAGCAATCTCATTTGTTTTTAACGAGGAGTATGTACATAC
GGAAACCGGCACGTTCACCATAGGCGAGCAACGTGCCCTCTGGGTAAACGGCAAGATCGTGTACAATGGGAAGCTTTATC
AGGAGCTATTCTTCGAGCCGACCAGCCCGCAATCCTCTTTCGACTTGAAGGCGGTCACGATCGGCGTGGATTTTCACTGG
CAACGACAGGAGGATCAACGCTTCAAGGGAGCGTTGAACCTCGTGGCGACCGATAAAGGTATCGTCACGATCAACCAAGT
GGACGTGGAGGAATACCTTACCAGCGTAATCTCCTCGGAGATGAGCGCCAACGCTTCCAAAGAGTTGCTGAAAGCCCATG
CCGTGATCTCGCGAAGCTGGCTCTTGGCGCAGGTCGAGAAGAATTTCAACTTGAACGGATCGGTTACGCCCTATAAAAGT
TGTTACCGCGACAGCGAGACCTTGATCCGCTGGTACGACCGGGAGGACCATGATCTGTTCGATGTCTGTGCCGACGACCA
TTGCCAGCGTTACCAAGGTATTACCCGGGCATCGAACCCGATAGTCAGGGAGGTGATCAAAGAGACACGTGGAGAGGTAT
TGATGGATAACGATACGATCTGCGACGCCCGCTTCTCGAAATGCTGCGGAGGCGTGACCGAGAAATTCGAGAATTGCTGG
GAACCGGTTCCCCACTCCTATCTTACCGCCTTGAGGGATGACGAGATTCCCTCCTATCCCGACTTGACGGACGAGCGGGA
AGCGGAACAATGGATACGTACCTCACCCGAAGCCTTCTGTAATACAACGGACAAGGAGATCCTTAGCCAAGTGCTAAACA
ACTACGATCAAGAGACCACGGATTTCTACCGTTGGAAGGTAGAATATACGCAGGAGGAACTATCAAGGTTGATCCACCGG
AAAACGGGTATGGATTTCGGGCCGATCATCGATCTCATACCGTTGGAAAGAGGTTCGTCCGGACGCATCACGAAACTCAA
GATCGTAGGGGTACGCCGTTCGTTCACCATCGGCAAAGAGCTTGAGATACGCCGGACATTATCCGAGACGCATCTATACA
GCTCGGCCTTTGTTGTCGATAAGAAGGATATCCGCCTTGATATCCCCTCCCGCTTCATCTTGACAGGAGCCGGATGGGGA
CATGGCGTAGGGCTTTGCCAGATCGGAGCCGCCGTGATGGGAGCCAAAGGATATTCGTACCGGAAAATCCTCACGCATTA
TTTCCCCGGAGCCTCTATTGAGAAAAGGTATTAA

Upstream 100 bases:

>100_bases
CCGCCGAGATACTGGCGGTTGTCATGTACCTTGTCATGATCGCTTACCTCACATTTAATTCCCTGAACGCGAAAAAAGAA
TAGAATAAAGGAATAAGGAT

Downstream 100 bases:

>100_bases
ACAAGGGTGTCCAGATTTTGGACACCCTTGTCCAATTATTGGACACTCATAAACAATCGTACGCCACTCATCCCTCTGTT
TTTCAACCACATAAACACAA

Product: hypothetical protein

Products: NA

Alternate protein names: SpoIID/LytB Domain Protein; SpoIID/LytB Domain-Containing Protein; Sporulation Protein SpoIID-Related Protein; Stage II Sporulation Protein D; Stage II Sporulation-Related Protein; Stage II Sporulation Protein; Sporulation Stage II Protein D; Group 2 Family Glycosyltransferase; Sporulation Related Protein; SpoIID-Like Protein; Amidase Enhancer-Like; Sporulation Protein-Like Protein; SpoIID Sporulation Protein; Glycosyl Transferase Group 2 Family; Sporulation Protein SpoIID; Spoiid/Lytb Domain Protein; Sporulation Protein And Related Proteins-Like; Sporulation Protein Spoiid; Lipoprotein

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEPTSPQSSFDLKAVTIGVDFHW
QRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSEMSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKS
CYRDSETLIRWYDREDHDLFDVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW
EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETTDFYRWKVEYTQEELSRLIHR
KTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKELEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWG
HGVGLCQIGAAVMGAKGYSYRKILTHYFPGASIEKRY

Sequences:

>Translated_437_residues
MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEPTSPQSSFDLKAVTIGVDFHW
QRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSEMSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKS
CYRDSETLIRWYDREDHDLFDVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW
EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETTDFYRWKVEYTQEELSRLIHR
KTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKELEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWG
HGVGLCQIGAAVMGAKGYSYRKILTHYFPGASIEKRY
>Mature_437_residues
MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEPTSPQSSFDLKAVTIGVDFHW
QRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSEMSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKS
CYRDSETLIRWYDREDHDLFDVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW
EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETTDFYRWKVEYTQEELSRLIHR
KTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKELEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWG
HGVGLCQIGAAVMGAKGYSYRKILTHYFPGASIEKRY

Specific function: Unknown

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49973; Mature: 49973

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEP
CCCCEEEEEEHHHHHHHEEECCCEEEECCCEEEECCCEEEEECCEEEECCHHHHHHHCCC
TSPQSSFDLKAVTIGVDFHWQRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSE
CCCCCCCCEEEEEEEEEEEECCCHHHHHHHHEEEEEECCCEEEEEECCHHHHHHHHHHHH
MSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKSCYRDSETLIRWYDREDHDLF
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHEECCCCCCCHH
DVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCHHHHHHHHHC
EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETT
CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCC
DFYRWKVEYTQEELSRLIHRKTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKE
CEEEEEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCH
LEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWGHGVGLCQIGAAVMGAKGYSY
HHHHHHHHHHHHHHEEEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHH
RKILTHYFPGASIEKRY
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEAPVINVGIMTHKAISFVFNEEYVHTETGTFTIGEQRALWVNGKIVYNGKLYQELFFEP
CCCCEEEEEEHHHHHHHEEECCCEEEECCCEEEECCCEEEEECCEEEECCHHHHHHHCCC
TSPQSSFDLKAVTIGVDFHWQRQEDQRFKGALNLVATDKGIVTINQVDVEEYLTSVISSE
CCCCCCCCEEEEEEEEEEEECCCHHHHHHHHEEEEEECCCEEEEEECCHHHHHHHHHHHH
MSANASKELLKAHAVISRSWLLAQVEKNFNLNGSVTPYKSCYRDSETLIRWYDREDHDLF
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHEECCCCCCCHH
DVCADDHCQRYQGITRASNPIVREVIKETRGEVLMDNDTICDARFSKCCGGVTEKFENCW
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCHHHHHHHHHC
EPVPHSYLTALRDDEIPSYPDLTDEREAEQWIRTSPEAFCNTTDKEILSQVLNNYDQETT
CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCC
DFYRWKVEYTQEELSRLIHRKTGMDFGPIIDLIPLERGSSGRITKLKIVGVRRSFTIGKE
CEEEEEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCH
LEIRRTLSETHLYSSAFVVDKKDIRLDIPSRFILTGAGWGHGVGLCQIGAAVMGAKGYSY
HHHHHHHHHHHHHHEEEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHH
RKILTHYFPGASIEKRY
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA