| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is aroF [H]
Identifier: 150008016
GI number: 150008016
Start: 1599295
End: 1600365
Strand: Direct
Name: aroF [H]
Synonym: BDI_1379
Alternate gene names: 150008016
Gene position: 1599295-1600365 (Clockwise)
Preceding gene: 150008015
Following gene: 150008017
Centisome position: 33.24
GC content: 49.86
Gene sequence:
>1071_bases ATGGAAATGAAGATTGAACCGTTAGCATTACCGGGAGTTGACACACAACGTCCTATCGTAATCGCAGGCCCTTGTAGCGC CGAGACAGAAGAGCAAGTGTTAGAAACAGCCCAAGGATTAGCCTCCAGAGGCGTTAAGATATTCCGTGCGGGTATTTGGA AGCCTCGTACGAAACCGGGTGGATTCGAGGGCATCGGAGCCGAGGGATTGGCTTGGTTGAAGAAAGTGAAAAAAGAGACC GGCATGCTGGTATCTACCGAGGTAGCGACTAAAGATCATGTATTCGAGGCATTGAAAGCCGGTATCGATATCCTTTGGAT CGGAGCACGTACGACGGTAAATCCATTCGCTGTCCAAGAGATCGCCGACGCGTTAAAAGGGGTTGATGTACCTGTATTGA TCAAGAACCCGGTTAACCCGGACTTGGAGTTATGGATCGGAGCGTTCGAGCGTTTGTACGGAGCGGGCATTCATCGTTTG GGTGCTATCCATAGAGGTTTCAGCTCATACGACAAGAAAATCTACCGTAACCTTCCGTTGTGGCATATTCCTATCGAGCT TCGCCGCCGTATGCCGGACCTGCCTATTTTCTGTGATCCTAGTCACATTGGTGGTAAGCGTGAGTTGGTAGCCCCACTTT GCCAGCAAGCGATGGACTTGAGTTTCGACGGCTTGATCGTAGAGTCTCATTGTAACCCGGATTGCGCATGGAGCGACGCT TCCCAGCAAATCACCCCGGATGTATTGGATTACGTATTGAACCTATTGGTGATCCGTGACGTAAACCAGACTACCGAGAA CCTGACCGCTCTTCGCCGCCAGATCGACGGTATCGACGAGCAATTATTGGAGCTTTTGGCTAAACGTATGCGTATCTCCA AGGAGATCGGCGTTTATAAGAAAGAGCACAATATGCCGATCTTACAGTCTCCCCGCTACAGCGAGATCTTAGAGAAACGC TCCTGCATGGGTGAGCAAATGGACCTGAGCCCGGACTTTGTAAAGGAGATCTTGAAGGAGATCCATGAGGAATCCGTGCG CCAGCAAATGATTATCATGAACGAACAATAA
Upstream 100 bases:
>100_bases CGTATCTCCCTTTGCTGCAAGAACGAGACTTTAGAAGAAGCCTTGAAGAGAATTGAGAATTTATAACTGAAAATTGAAAA TTAAAATATAGATCACAAAG
Downstream 100 bases:
>100_bases TTTATAAGATGAAAATATTGATTTTAGGCGCAGGAAAGATGGGTTCTTTCTTCACCGACCTGCTTAGTTTTGATCATGAG GTAGCCGTATTGGAGAAAGA
Product: putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPGGFEGIGAEGLAWLKKVKKET GMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQEIADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRL GAIHRGFSSYDKKIYRNLPLWHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYKKEHNMPILQSPRYSEILEKR SCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ
Sequences:
>Translated_356_residues MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPGGFEGIGAEGLAWLKKVKKET GMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQEIADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRL GAIHRGFSSYDKKIYRNLPLWHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYKKEHNMPILQSPRYSEILEKR SCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ >Mature_356_residues MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPGGFEGIGAEGLAWLKKVKKET GMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQEIADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRL GAIHRGFSSYDKKIYRNLPLWHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYKKEHNMPILQSPRYSEILEKR SCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 40032; Mature: 40032
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPG CCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC GFEGIGAEGLAWLKKVKKETGMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQE CCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH IADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRLGAIHRGFSSYDKKIYRNLPL HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE WHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA EECCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYK CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE KEHNMPILQSPRYSEILEKRSCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPG CCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC GFEGIGAEGLAWLKKVKKETGMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQE CCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH IADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRLGAIHRGFSSYDKKIYRNLPL HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE WHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA EECCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYK CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE KEHNMPILQSPRYSEILEKRSCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]