Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is aroF [H]

Identifier: 150008016

GI number: 150008016

Start: 1599295

End: 1600365

Strand: Direct

Name: aroF [H]

Synonym: BDI_1379

Alternate gene names: 150008016

Gene position: 1599295-1600365 (Clockwise)

Preceding gene: 150008015

Following gene: 150008017

Centisome position: 33.24

GC content: 49.86

Gene sequence:

>1071_bases
ATGGAAATGAAGATTGAACCGTTAGCATTACCGGGAGTTGACACACAACGTCCTATCGTAATCGCAGGCCCTTGTAGCGC
CGAGACAGAAGAGCAAGTGTTAGAAACAGCCCAAGGATTAGCCTCCAGAGGCGTTAAGATATTCCGTGCGGGTATTTGGA
AGCCTCGTACGAAACCGGGTGGATTCGAGGGCATCGGAGCCGAGGGATTGGCTTGGTTGAAGAAAGTGAAAAAAGAGACC
GGCATGCTGGTATCTACCGAGGTAGCGACTAAAGATCATGTATTCGAGGCATTGAAAGCCGGTATCGATATCCTTTGGAT
CGGAGCACGTACGACGGTAAATCCATTCGCTGTCCAAGAGATCGCCGACGCGTTAAAAGGGGTTGATGTACCTGTATTGA
TCAAGAACCCGGTTAACCCGGACTTGGAGTTATGGATCGGAGCGTTCGAGCGTTTGTACGGAGCGGGCATTCATCGTTTG
GGTGCTATCCATAGAGGTTTCAGCTCATACGACAAGAAAATCTACCGTAACCTTCCGTTGTGGCATATTCCTATCGAGCT
TCGCCGCCGTATGCCGGACCTGCCTATTTTCTGTGATCCTAGTCACATTGGTGGTAAGCGTGAGTTGGTAGCCCCACTTT
GCCAGCAAGCGATGGACTTGAGTTTCGACGGCTTGATCGTAGAGTCTCATTGTAACCCGGATTGCGCATGGAGCGACGCT
TCCCAGCAAATCACCCCGGATGTATTGGATTACGTATTGAACCTATTGGTGATCCGTGACGTAAACCAGACTACCGAGAA
CCTGACCGCTCTTCGCCGCCAGATCGACGGTATCGACGAGCAATTATTGGAGCTTTTGGCTAAACGTATGCGTATCTCCA
AGGAGATCGGCGTTTATAAGAAAGAGCACAATATGCCGATCTTACAGTCTCCCCGCTACAGCGAGATCTTAGAGAAACGC
TCCTGCATGGGTGAGCAAATGGACCTGAGCCCGGACTTTGTAAAGGAGATCTTGAAGGAGATCCATGAGGAATCCGTGCG
CCAGCAAATGATTATCATGAACGAACAATAA

Upstream 100 bases:

>100_bases
CGTATCTCCCTTTGCTGCAAGAACGAGACTTTAGAAGAAGCCTTGAAGAGAATTGAGAATTTATAACTGAAAATTGAAAA
TTAAAATATAGATCACAAAG

Downstream 100 bases:

>100_bases
TTTATAAGATGAAAATATTGATTTTAGGCGCAGGAAAGATGGGTTCTTTCTTCACCGACCTGCTTAGTTTTGATCATGAG
GTAGCCGTATTGGAGAAAGA

Product: putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPGGFEGIGAEGLAWLKKVKKET
GMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQEIADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRL
GAIHRGFSSYDKKIYRNLPLWHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA
SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYKKEHNMPILQSPRYSEILEKR
SCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ

Sequences:

>Translated_356_residues
MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPGGFEGIGAEGLAWLKKVKKET
GMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQEIADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRL
GAIHRGFSSYDKKIYRNLPLWHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA
SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYKKEHNMPILQSPRYSEILEKR
SCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ
>Mature_356_residues
MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPGGFEGIGAEGLAWLKKVKKET
GMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQEIADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRL
GAIHRGFSSYDKKIYRNLPLWHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA
SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYKKEHNMPILQSPRYSEILEKR
SCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ

Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]

COG id: COG2876

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I DAHP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: 500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006218
- InterPro:   IPR006268 [H]

Pfam domain/function: PF00793 DAHP_synth_1 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 40032; Mature: 40032

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPG
CCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
GFEGIGAEGLAWLKKVKKETGMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQE
CCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
IADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRLGAIHRGFSSYDKKIYRNLPL
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
WHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA
EECCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYK
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE
KEHNMPILQSPRYSEILEKRSCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEMKIEPLALPGVDTQRPIVIAGPCSAETEEQVLETAQGLASRGVKIFRAGIWKPRTKPG
CCCCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
GFEGIGAEGLAWLKKVKKETGMLVSTEVATKDHVFEALKAGIDILWIGARTTVNPFAVQE
CCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH
IADALKGVDVPVLIKNPVNPDLELWIGAFERLYGAGIHRLGAIHRGFSSYDKKIYRNLPL
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
WHIPIELRRRMPDLPIFCDPSHIGGKRELVAPLCQQAMDLSFDGLIVESHCNPDCAWSDA
EECCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
SQQITPDVLDYVLNLLVIRDVNQTTENLTALRRQIDGIDEQLLELLAKRMRISKEIGVYK
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE
KEHNMPILQSPRYSEILEKRSCMGEQMDLSPDFVKEILKEIHEESVRQQMIIMNEQ
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571; 12743122 [H]