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The map label for this gene is rpe [H]

Identifier: 150007987

GI number: 150007987

Start: 1568500

End: 1569171

Strand: Reverse

Name: rpe [H]

Synonym: BDI_1349

Alternate gene names: 150007987

Gene position: 1569171-1568500 (Counterclockwise)

Preceding gene: 150007988

Following gene: 150007986

Centisome position: 32.61

GC content: 35.27

Gene sequence:

>672_bases
ATGAATAGAATATCTAAATTATCCGTTTCGCTTATGTGTGCTGACTTGGTAAACTTGGAGCGTGACATCCATATTTTAGA
AGAAAATGGAGTTGATTATTTACATGTAGATATAATGGACGCTGCATTTGTCCCAAATCTTACATTTGGTCCTGATGTGG
TTAATTCTATTCGAAAGATTACGGGTCTTCCAGTTGATATTCACTTGCTTATGGAACATCCTCGTACAATTATCCGTTCA
ATGGACATTAGAGATGGGGATATTGTATCTATTCATAGTGAATGTAAAGAAAGTGTTTTGGAGAATGCGGCTTTTATTAA
ACAGAGGGGTGCGAAATTTGGATTAGCCTTAAATCCGGATACTTCTATAGATGAGGTACGTAAATATCTCCCTTATGTTG
ATGTTATATTATTGATGCTTATTGTACCCGGATTTGCTGGAACAATGATGATTCATGGAATGATGGAAAAAGTAGGTGAA
ACTCGTCAATATTTGGATCAACATAATTATGGAAATGTAGAAATATGTGTAGATGGAAGTGTCAGTACTGAGAGAGCGAA
ATATATGCGTCAATTGGGAGCCTCTATTTTCGTGGGAGGAACAGCCGGAATTTTTAAACAAGGATGTATTCTACAAGATA
CGATTCCTTTATTTATGTCATATATAAAATAG

Upstream 100 bases:

>100_bases
AGATTGATTACCCATCGTTTGGATTTTAGCCAGTTAATGGAAGGCTTGATGCTTATGCGTGATAATTCTATTTATTCAAA
TAAAGTAATGTTGGTAGATC

Downstream 100 bases:

>100_bases
TAATTTATGATACTTAAGCTTTGTGTAAAAGAAGTCTTACGATTTCTCTTGCGTGTATTCTATGTGTTTAGAGTAAAGTC
AAATAGGGTGTTATTTGAAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNRISKLSVSLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKITGLPVDIHLLMEHPRTIIRS
MDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPDTSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGE
TRQYLDQHNYGNVEICVDGSVSTERAKYMRQLGASIFVGGTAGIFKQGCILQDTIPLFMSYIK

Sequences:

>Translated_223_residues
MNRISKLSVSLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKITGLPVDIHLLMEHPRTIIRS
MDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPDTSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGE
TRQYLDQHNYGNVEICVDGSVSTERAKYMRQLGASIFVGGTAGIFKQGCILQDTIPLFMSYIK
>Mature_223_residues
MNRISKLSVSLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKITGLPVDIHLLMEHPRTIIRS
MDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPDTSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGE
TRQYLDQHNYGNVEICVDGSVSTERAKYMRQLGASIFVGGTAGIFKQGCILQDTIPLFMSYIK

Specific function: D-ALLOSE METABOLISM. ESSENTIAL FOR THIS PATHWAY. [C]

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=199, Percent_Identity=32.6633165829146, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI219879828, Length=199, Percent_Identity=31.6582914572864, Blast_Score=110, Evalue=7e-25,
Organism=Escherichia coli, GI1790523, Length=208, Percent_Identity=33.6538461538462, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1789788, Length=203, Percent_Identity=34.4827586206897, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1790754, Length=177, Percent_Identity=28.8135593220339, Blast_Score=82, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17552948, Length=202, Percent_Identity=37.1287128712871, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6322341, Length=209, Percent_Identity=29.6650717703349, Blast_Score=112, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24586301, Length=222, Percent_Identity=35.5855855855856, Blast_Score=137, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24904; Mature: 24904

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRISKLSVSLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKI
CCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHH
TGLPVDIHLLMEHPRTIIRSMDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPD
HCCCEEHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
TSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGETRQYLDQHNYGNVEICVDGS
CCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
VSTERAKYMRQLGASIFVGGTAGIFKQGCILQDTIPLFMSYIK
CCHHHHHHHHHHCCEEEECCCHHHHHCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNRISKLSVSLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKI
CCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHH
TGLPVDIHLLMEHPRTIIRSMDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPD
HCCCEEHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
TSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGETRQYLDQHNYGNVEICVDGS
CCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
VSTERAKYMRQLGASIFVGGTAGIFKQGCILQDTIPLFMSYIK
CCHHHHHHHHHHCCEEEECCCHHHHHCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]