| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007980
Identifier: 150007980
GI number: 150007980
Start: 1560963
End: 1562081
Strand: Reverse
Name: 150007980
Synonym: BDI_1342
Alternate gene names: NA
Gene position: 1562081-1560963 (Counterclockwise)
Preceding gene: 150007981
Following gene: 150007979
Centisome position: 32.47
GC content: 47.81
Gene sequence:
>1119_bases ATGGAAAAACAAAAACAACAACCCCAGCGGTTGCAATCATTGGATGCCCTTAGGGGTTTTGACATGCTCTTTATTATGGG CGGTGCTTCTTTATTTGTCGCTTTGGCGACATTGTTTCCGAATCCTTTTTTTCAGGCGATAGCCGGGCAGATGGAACATG TGGAATGGAACGGATTGGCGCATCACGACACGATCTTCCCATTGTTCCTCTTTATTGCGGGTATCTCGTTTCCGTTCTCA CTAGAGAAGCAACGAGGAAAAGGTATGACGGAAGGGGCGATTTATAAGAAGATCGTCCGTCGGGGGATTACCTTGGTTTT CTTGGGATTGGTATATAACGGGCTATTGTCGTTCGAATTTGACCACCTGCGTTGTGCGAGCGTGCTGGCGCGTATCGGGT TGGGATGGATGTTCGCAGCCTTGTTGTTTGTCCGTTTCGGTTGGAAAGTGCGTGCGGGGATAACGGTTCTTATTTTGGTT GGCTATTGGCTGGCGATGGCTTTTGTGCCTGTGCCGGACGCCGGTGGAGCGGGGCCATTCACGCTCGAGGGAAACTTGGT AGGGTATATTGACCGCCTGTTTCTTCCCGGACGTTTGCACGAGACTGTTTTTGATCCGGAGGGTTTATTCTCCACCGTCC CTGCGATTGCCACGGCAATGTTGGGTATGTTCACTGGTGAATGGATTAAGTTACGGAAAGAGGGGCTGACCGACCGAAAT AAAGTGCTTTGTTTAGTAGGAGCGGGAGCTGTATTGTTGATCGTCGGCTTGTTATGGAGCTTGGTCTTCCCTATCAATAA GAAGCTATGGACAAGCTCTTTTGTCTGTGTGGTAGGTGCTTATTCCGTTTGGATGTTTGCTTTGTTCTTCTATATCATAG ATGTATTGGGGTGGCGTAAATGGACCTTGTTTTTTACCGTGATCGGCATGAACTCTATTACGATCTATTTGGCACAGCGT TTCATCCGTTTCTCCTATACTTCCGAGGCTATATTCGGAGGGTTGGCGAAATTGATGCCCGAGACCGCCCAGCCTTTGGT TAGCGCTATCGCATATATCGCTGTTTGTTGGGGATTCTTGTATTTCTTATATCGCCAACGTATTTTCTTGAAAGTATAA
Upstream 100 bases:
>100_bases ATGCGAGGGGAAAGATTAGGAGCGTCTTTTATGTCAAATCCCATTCGTATGTAAGTGAGTTTGAGTATATTTGTGTTGAC TTTAAATGTAAATAGATTAT
Downstream 100 bases:
>100_bases TAGACGGATGGAGAAGAAGAAATTAAATCGGTTGGAGTCATTGGACGTACTCCGTGGCTTCGACCTTTTTTGCTTAGTGG TGTTGGAGATGGTGTTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MEKQKQQPQRLQSLDALRGFDMLFIMGGASLFVALATLFPNPFFQAIAGQMEHVEWNGLAHHDTIFPLFLFIAGISFPFS LEKQRGKGMTEGAIYKKIVRRGITLVFLGLVYNGLLSFEFDHLRCASVLARIGLGWMFAALLFVRFGWKVRAGITVLILV GYWLAMAFVPVPDAGGAGPFTLEGNLVGYIDRLFLPGRLHETVFDPEGLFSTVPAIATAMLGMFTGEWIKLRKEGLTDRN KVLCLVGAGAVLLIVGLLWSLVFPINKKLWTSSFVCVVGAYSVWMFALFFYIIDVLGWRKWTLFFTVIGMNSITIYLAQR FIRFSYTSEAIFGGLAKLMPETAQPLVSAIAYIAVCWGFLYFLYRQRIFLKV
Sequences:
>Translated_372_residues MEKQKQQPQRLQSLDALRGFDMLFIMGGASLFVALATLFPNPFFQAIAGQMEHVEWNGLAHHDTIFPLFLFIAGISFPFS LEKQRGKGMTEGAIYKKIVRRGITLVFLGLVYNGLLSFEFDHLRCASVLARIGLGWMFAALLFVRFGWKVRAGITVLILV GYWLAMAFVPVPDAGGAGPFTLEGNLVGYIDRLFLPGRLHETVFDPEGLFSTVPAIATAMLGMFTGEWIKLRKEGLTDRN KVLCLVGAGAVLLIVGLLWSLVFPINKKLWTSSFVCVVGAYSVWMFALFFYIIDVLGWRKWTLFFTVIGMNSITIYLAQR FIRFSYTSEAIFGGLAKLMPETAQPLVSAIAYIAVCWGFLYFLYRQRIFLKV >Mature_372_residues MEKQKQQPQRLQSLDALRGFDMLFIMGGASLFVALATLFPNPFFQAIAGQMEHVEWNGLAHHDTIFPLFLFIAGISFPFS LEKQRGKGMTEGAIYKKIVRRGITLVFLGLVYNGLLSFEFDHLRCASVLARIGLGWMFAALLFVRFGWKVRAGITVLILV GYWLAMAFVPVPDAGGAGPFTLEGNLVGYIDRLFLPGRLHETVFDPEGLFSTVPAIATAMLGMFTGEWIKLRKEGLTDRN KVLCLVGAGAVLLIVGLLWSLVFPINKKLWTSSFVCVVGAYSVWMFALFFYIIDVLGWRKWTLFFTVIGMNSITIYLAQR FIRFSYTSEAIFGGLAKLMPETAQPLVSAIAYIAVCWGFLYFLYRQRIFLKV
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=421, Percent_Identity=26.1282660332542, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI24639786, Length=371, Percent_Identity=27.2237196765499, Blast_Score=109, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41790; Mature: 41790
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQKQQPQRLQSLDALRGFDMLFIMGGASLFVALATLFPNPFFQAIAGQMEHVEWNGLA CCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC HHDTIFPLFLFIAGISFPFSLEKQRGKGMTEGAIYKKIVRRGITLVFLGLVYNGLLSFEF CHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH DHLRCASVLARIGLGWMFAALLFVRFGWKVRAGITVLILVGYWLAMAFVPVPDAGGAGPF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE TLEGNLVGYIDRLFLPGRLHETVFDPEGLFSTVPAIATAMLGMFTGEWIKLRKEGLTDRN EECCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KVLCLVGAGAVLLIVGLLWSLVFPINKKLWTSSFVCVVGAYSVWMFALFFYIIDVLGWRK CEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WTLFFTVIGMNSITIYLAQRFIRFSYTSEAIFGGLAKLMPETAQPLVSAIAYIAVCWGFL HHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YFLYRQRIFLKV HHHHHHHHHHCC >Mature Secondary Structure MEKQKQQPQRLQSLDALRGFDMLFIMGGASLFVALATLFPNPFFQAIAGQMEHVEWNGLA CCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC HHDTIFPLFLFIAGISFPFSLEKQRGKGMTEGAIYKKIVRRGITLVFLGLVYNGLLSFEF CHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH DHLRCASVLARIGLGWMFAALLFVRFGWKVRAGITVLILVGYWLAMAFVPVPDAGGAGPF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE TLEGNLVGYIDRLFLPGRLHETVFDPEGLFSTVPAIATAMLGMFTGEWIKLRKEGLTDRN EECCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KVLCLVGAGAVLLIVGLLWSLVFPINKKLWTSSFVCVVGAYSVWMFALFFYIIDVLGWRK CEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WTLFFTVIGMNSITIYLAQRFIRFSYTSEAIFGGLAKLMPETAQPLVSAIAYIAVCWGFL HHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YFLYRQRIFLKV HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA