| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007966
Identifier: 150007966
GI number: 150007966
Start: 1545695
End: 1546777
Strand: Reverse
Name: 150007966
Synonym: BDI_1327
Alternate gene names: NA
Gene position: 1546777-1545695 (Counterclockwise)
Preceding gene: 150007967
Following gene: 150007964
Centisome position: 32.15
GC content: 51.71
Gene sequence:
>1083_bases ATGAATAAGCCATTTATTATCGACGCTCATCTCGACCTTAGCATGAACGCTTTGGAGTGGAACCGGGATTTGCGTCAACC CCTAAAGGAAATAAACCGGAGAGAAATCGGTATGACCGATAAGCCCGACCGTGGAAACGCCACTATATCGTTTGAGGAAC TGCGTAAAGGAAACGTCGGGTTGGTAGTCGCCACCCAGATCGGTCGCTATGTAGGGCCGGATAATCCACTTCCCGGTTGG CATTCCCCGGAACAAGCTTGGGCGCAGACCCAAGGCCAACTTGCTTGGTATAAGGCGATGGAAGAGGAGGGCCAGATGGT CATGATCCGGGATAAGAAGGCCTTGGATACGCATCTGGCTCTTTGGAAAGACGGTGAACCCGCCGACAAGAAGCCGATCG GTTATGTATTAAGTATCGAGGGAGCCGACTCGTTCATCACGGTGAATCATGTGGAAAGGGCGTATGCTTATGGCTTGAGG GCGGTTGGCCCGGCACATTACGGCCCCGGAAGATATGCCAACGGTACGGATTCTACCGGTCATCTGAATGCCATGGGGAA AGAGTTGTTGCGTACCATGGATCGCTTGGGTATGATTCTTGACGTGACCCATTTATGTGATGAGGCTTTCTGGGATGCAT TGGATTTGTATAAGGGACCGATTTGGGCGAGCCATAACAACTGTCGGGCCTTCGTAGATCACAACCGCCAGTTTAGCGAC GAGATGATCAAGGCGTTGATAGAGCGTGGCGCCGTGATCGGTATCGCCCTAGACGCTTGGATGATGGTACCGAACTGGGT GCGAGGCGAGTCTACTCCAAGAGGCATGAACTGTGGTATGGAGATTATGGCGAACAATATCGATCATGTCTGCCAATTGG CCGGAAACGCGAACCATGTGGCTATCGGCAGTGATCTGGATGGTGCTTTCGGTACGGAGCAATGCCCGTATGACCTAGTA ACGATCGCCGATCTCCAAAAGATATTCCCGATCCTTCAATACCGTGGCTTTACGGACGATGCTATCAACCGTATCGCCTC TGGTAACTGGATTGAGTTCTTACGGAAGCATTTGCCGGAATAA
Upstream 100 bases:
>100_bases AGGCGATCGGCGAATGGCCTATCATTGCCCGTTCACGTCGCATCACCTATTAACGGTAATCAAATTTTCAATTATCAATT ATCAACTCTCAATTAATAAA
Downstream 100 bases:
>100_bases GCTACCGCAACCCGGGTTGCAGTGATACCGCGATGTGGATGCAGTGTTACTGCAACCCGGATTGTAGCGTCACTGCATCC GCATCGCGGTAAAAAGACAA
Product: putative peptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNKPFIIDAHLDLSMNALEWNRDLRQPLKEINRREIGMTDKPDRGNATISFEELRKGNVGLVVATQIGRYVGPDNPLPGW HSPEQAWAQTQGQLAWYKAMEEEGQMVMIRDKKALDTHLALWKDGEPADKKPIGYVLSIEGADSFITVNHVERAYAYGLR AVGPAHYGPGRYANGTDSTGHLNAMGKELLRTMDRLGMILDVTHLCDEAFWDALDLYKGPIWASHNNCRAFVDHNRQFSD EMIKALIERGAVIGIALDAWMMVPNWVRGESTPRGMNCGMEIMANNIDHVCQLAGNANHVAIGSDLDGAFGTEQCPYDLV TIADLQKIFPILQYRGFTDDAINRIASGNWIEFLRKHLPE
Sequences:
>Translated_360_residues MNKPFIIDAHLDLSMNALEWNRDLRQPLKEINRREIGMTDKPDRGNATISFEELRKGNVGLVVATQIGRYVGPDNPLPGW HSPEQAWAQTQGQLAWYKAMEEEGQMVMIRDKKALDTHLALWKDGEPADKKPIGYVLSIEGADSFITVNHVERAYAYGLR AVGPAHYGPGRYANGTDSTGHLNAMGKELLRTMDRLGMILDVTHLCDEAFWDALDLYKGPIWASHNNCRAFVDHNRQFSD EMIKALIERGAVIGIALDAWMMVPNWVRGESTPRGMNCGMEIMANNIDHVCQLAGNANHVAIGSDLDGAFGTEQCPYDLV TIADLQKIFPILQYRGFTDDAINRIASGNWIEFLRKHLPE >Mature_360_residues MNKPFIIDAHLDLSMNALEWNRDLRQPLKEINRREIGMTDKPDRGNATISFEELRKGNVGLVVATQIGRYVGPDNPLPGW HSPEQAWAQTQGQLAWYKAMEEEGQMVMIRDKKALDTHLALWKDGEPADKKPIGYVLSIEGADSFITVNHVERAYAYGLR AVGPAHYGPGRYANGTDSTGHLNAMGKELLRTMDRLGMILDVTHLCDEAFWDALDLYKGPIWASHNNCRAFVDHNRQFSD EMIKALIERGAVIGIALDAWMMVPNWVRGESTPRGMNCGMEIMANNIDHVCQLAGNANHVAIGSDLDGAFGTEQCPYDLV TIADLQKIFPILQYRGFTDDAINRIASGNWIEFLRKHLPE
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=279, Percent_Identity=23.2974910394265, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221475880, Length=177, Percent_Identity=26.5536723163842, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI161083233, Length=281, Percent_Identity=22.7758007117438, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 40357; Mature: 40357
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPFIIDAHLDLSMNALEWNRDLRQPLKEINRREIGMTDKPDRGNATISFEELRKGNVG CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCC LVVATQIGRYVGPDNPLPGWHSPEQAWAQTQGQLAWYKAMEEEGQMVMIRDKKALDTHLA EEEEEHHCHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHE LWKDGEPADKKPIGYVLSIEGADSFITVNHVERAYAYGLRAVGPAHYGPGRYANGTDSTG EECCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC HLNAMGKELLRTMDRLGMILDVTHLCDEAFWDALDLYKGPIWASHNNCRAFVDHNRQFSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCHHH EMIKALIERGAVIGIALDAWMMVPNWVRGESTPRGMNCGMEIMANNIDHVCQLAGNANHV HHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCEE AIGSDLDGAFGTEQCPYDLVTIADLQKIFPILQYRGFTDDAINRIASGNWIEFLRKHLPE EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MNKPFIIDAHLDLSMNALEWNRDLRQPLKEINRREIGMTDKPDRGNATISFEELRKGNVG CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCC LVVATQIGRYVGPDNPLPGWHSPEQAWAQTQGQLAWYKAMEEEGQMVMIRDKKALDTHLA EEEEEHHCHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCHHHHHHHE LWKDGEPADKKPIGYVLSIEGADSFITVNHVERAYAYGLRAVGPAHYGPGRYANGTDSTG EECCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC HLNAMGKELLRTMDRLGMILDVTHLCDEAFWDALDLYKGPIWASHNNCRAFVDHNRQFSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCHHH EMIKALIERGAVIGIALDAWMMVPNWVRGESTPRGMNCGMEIMANNIDHVCQLAGNANHV HHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCEE AIGSDLDGAFGTEQCPYDLVTIADLQKIFPILQYRGFTDDAINRIASGNWIEFLRKHLPE EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]