| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007964
Identifier: 150007964
GI number: 150007964
Start: 1541965
End: 1543836
Strand: Reverse
Name: 150007964
Synonym: BDI_1325
Alternate gene names: NA
Gene position: 1543836-1541965 (Counterclockwise)
Preceding gene: 150007966
Following gene: 150007962
Centisome position: 32.09
GC content: 47.28
Gene sequence:
>1872_bases ATGAGTATATCCGTATTAACAAAAGGCATGTCGTGTCTATTCTTTTGTTTTTGTGTTTGTTGTATGAATGCGCAAGTAAG AAACACTGATCCTGTACGTCACTTGAGGATATCCGGTTATTTGGGGCAACGGATCGACGCTTGTATCGAGTATCGAGTGA AAGCTCAAGATGTGGATCATTTGGTGGAACCTTTCCGGCATAAGGAAGAGACCTTGCGCTGGCAATCGGAATTTTGGGGA AAATGGATACAAGGGGCGATCGCCTCATACCGTTATGATAAAGATCCTGAGTTGTACAAGATTATTAAGAATGGAGCGGA GTCGTTGATGGAAACCCAATTACCGAATGGGTATATCGGTAATTATTCCGAGGAAGCGCAGTTGAACCAGTGGGATATAT GGGGGCGGAAATACACGGCTTTAGGTTTGATCGCTTATTATGACTTATCCGGGGATCGAAAAGCTTTGGATGCCGCCTGC CGGGTGATCGACCATTTGATGACGCAGGTGGGACCCGGAAAAGTGAATATCGTGACGACCGGTAATTATATAGGAATGCC AAGCTCTTCGGTACTTGAGCCGGTGATGTATCTGTATAATCGTACCCGGCAAGATAAATATCTGGATTTTGCCAAGTACA TCGTAAAGCAATGGGAGACTCCGGAAGGCCCTCGATTGATTAGTAAGGCGATTGCGGATATTCCTGTCGCCGGACGTTTT CCACATCCAAAGGTTTGGTTCTCTCCGGAGAATGGACAAAAAGCATATGAGATGATGTCTTGTTATGAGGGCTTGTTGGA ACTTTACAAGGTCACTAAGAATCCATTATATTTATCTGTGGTGGAGAAAACGATGAATCATATTATCAATGAGGAAATCA ATGTGGCTGGTTCCGGTAGTGCGTTCGAGTGCTGGTATGGGGGCAAGGCGTTACAAACTTATCCTACTTATCATACGATG GAGACTTGTGTGACGTTCACGTGGATGCAGATTTGTGACAGGATGCTCGGACTAACCGGAAATTCCTTATATGCGGACCA GATCGAGAAGGCTATGTATAACGCTTTACTAGCCTCGCTGAAAGCGGATGCCTCTCAAATAGCGAAATACAGTCCGTTGG AGGGCTGGCGGCATGAAGGAGAGGAGCAATGCGGTATGCATATCAATTGTTGCAATGCGAATGGACCTCGTGCTTTCGCG ATGATTCCGCAATTCGCTTATCAGATAAACGGCAGACGTATCGATGTCAACCTATATGCGGCTTCGAGCGTGGAGGTAGA GTTGGATAAAAAGACGAGGGTGTCGATGACACAGGAGACGAACTACCCGATAGACGGGCAAGTCCGGATTGTGGTGGAAC CGGAGAAGACGAGTGATTTTACGATCGCCTTGCGTATCCCGGCGTGGAGTGAGCGAACTGTGGTGTCTGTCAATGGTGAG CCTTTAACGGATCTGTTGGCTGGAGCATACCTACCGATTCATAGGACTTGGGAGAAAGGGGATGAAATTACGGTGGAGTT GGATATGCGGGCTCGCTTGGTGGAGCTGAACGAGGCTCAAGCGATCGTAAGAGGCCCTTTGGTGCTGGCTAGAGATAGCC GCTTTAAGGATGGAGATGTGGATGAGGCTTCCGTGATCGTCAGCAAGGATGGTTATGTGGAATTAACTCCGGTACAAGCC CCCGATTTCGCTTGGATGGCTTTTACCGTTCCTATGGTTTTAGGAACGGATTTGGAAGGAAACGGCAAGGCTCGCCCGAT TCATCTGTGCGATTTCGCATCAGCTGGTAATACGTGGAATCAGGCAGAACGTTATAGAGTGTGGCTACCAAAAACATGGA ATGTCATGCGTACGCCTTATAAACCTTATTGA
Upstream 100 bases:
>100_bases TTGTGTGTCAATATTCATATTTATTTTGTCAATTCTGAAAGTTCTGAACAAGTGGAATGTGCTATCTTTATCACATTTAT TAACTTTAAGAATTGTGTTT
Downstream 100 bases:
>100_bases GCGGTTCACTCCAGCTCAATGCGTCCGATCCCTGAATTCCGAGGGTGTAACCCCTTCTTTCTTCTTAAAGAATGTGGAGA ACTGGCCGGCATTCTCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 622
Protein sequence:
>623_residues MSISVLTKGMSCLFFCFCVCCMNAQVRNTDPVRHLRISGYLGQRIDACIEYRVKAQDVDHLVEPFRHKEETLRWQSEFWG KWIQGAIASYRYDKDPELYKIIKNGAESLMETQLPNGYIGNYSEEAQLNQWDIWGRKYTALGLIAYYDLSGDRKALDAAC RVIDHLMTQVGPGKVNIVTTGNYIGMPSSSVLEPVMYLYNRTRQDKYLDFAKYIVKQWETPEGPRLISKAIADIPVAGRF PHPKVWFSPENGQKAYEMMSCYEGLLELYKVTKNPLYLSVVEKTMNHIINEEINVAGSGSAFECWYGGKALQTYPTYHTM ETCVTFTWMQICDRMLGLTGNSLYADQIEKAMYNALLASLKADASQIAKYSPLEGWRHEGEEQCGMHINCCNANGPRAFA MIPQFAYQINGRRIDVNLYAASSVEVELDKKTRVSMTQETNYPIDGQVRIVVEPEKTSDFTIALRIPAWSERTVVSVNGE PLTDLLAGAYLPIHRTWEKGDEITVELDMRARLVELNEAQAIVRGPLVLARDSRFKDGDVDEASVIVSKDGYVELTPVQA PDFAWMAFTVPMVLGTDLEGNGKARPIHLCDFASAGNTWNQAERYRVWLPKTWNVMRTPYKPY
Sequences:
>Translated_623_residues MSISVLTKGMSCLFFCFCVCCMNAQVRNTDPVRHLRISGYLGQRIDACIEYRVKAQDVDHLVEPFRHKEETLRWQSEFWG KWIQGAIASYRYDKDPELYKIIKNGAESLMETQLPNGYIGNYSEEAQLNQWDIWGRKYTALGLIAYYDLSGDRKALDAAC RVIDHLMTQVGPGKVNIVTTGNYIGMPSSSVLEPVMYLYNRTRQDKYLDFAKYIVKQWETPEGPRLISKAIADIPVAGRF PHPKVWFSPENGQKAYEMMSCYEGLLELYKVTKNPLYLSVVEKTMNHIINEEINVAGSGSAFECWYGGKALQTYPTYHTM ETCVTFTWMQICDRMLGLTGNSLYADQIEKAMYNALLASLKADASQIAKYSPLEGWRHEGEEQCGMHINCCNANGPRAFA MIPQFAYQINGRRIDVNLYAASSVEVELDKKTRVSMTQETNYPIDGQVRIVVEPEKTSDFTIALRIPAWSERTVVSVNGE PLTDLLAGAYLPIHRTWEKGDEITVELDMRARLVELNEAQAIVRGPLVLARDSRFKDGDVDEASVIVSKDGYVELTPVQA PDFAWMAFTVPMVLGTDLEGNGKARPIHLCDFASAGNTWNQAERYRVWLPKTWNVMRTPYKPY >Mature_622_residues SISVLTKGMSCLFFCFCVCCMNAQVRNTDPVRHLRISGYLGQRIDACIEYRVKAQDVDHLVEPFRHKEETLRWQSEFWGK WIQGAIASYRYDKDPELYKIIKNGAESLMETQLPNGYIGNYSEEAQLNQWDIWGRKYTALGLIAYYDLSGDRKALDAACR VIDHLMTQVGPGKVNIVTTGNYIGMPSSSVLEPVMYLYNRTRQDKYLDFAKYIVKQWETPEGPRLISKAIADIPVAGRFP HPKVWFSPENGQKAYEMMSCYEGLLELYKVTKNPLYLSVVEKTMNHIINEEINVAGSGSAFECWYGGKALQTYPTYHTME TCVTFTWMQICDRMLGLTGNSLYADQIEKAMYNALLASLKADASQIAKYSPLEGWRHEGEEQCGMHINCCNANGPRAFAM IPQFAYQINGRRIDVNLYAASSVEVELDKKTRVSMTQETNYPIDGQVRIVVEPEKTSDFTIALRIPAWSERTVVSVNGEP LTDLLAGAYLPIHRTWEKGDEITVELDMRARLVELNEAQAIVRGPLVLARDSRFKDGDVDEASVIVSKDGYVELTPVQAP DFAWMAFTVPMVLGTDLEGNGKARPIHLCDFASAGNTWNQAERYRVWLPKTWNVMRTPYKPY
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70763; Mature: 70631
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISVLTKGMSCLFFCFCVCCMNAQVRNTDPVRHLRISGYLGQRIDACIEYRVKAQDVDH CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH LVEPFRHKEETLRWQSEFWGKWIQGAIASYRYDKDPELYKIIKNGAESLMETQLPNGYIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC NYSEEAQLNQWDIWGRKYTALGLIAYYDLSGDRKALDAACRVIDHLMTQVGPGKVNIVTT CCCCCCCCCCEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC GNYIGMPSSSVLEPVMYLYNRTRQDKYLDFAKYIVKQWETPEGPRLISKAIADIPVAGRF CCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC PHPKVWFSPENGQKAYEMMSCYEGLLELYKVTKNPLYLSVVEKTMNHIINEEINVAGSGS CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCC AFECWYGGKALQTYPTYHTMETCVTFTWMQICDRMLGLTGNSLYADQIEKAMYNALLASL EEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH KADASQIAKYSPLEGWRHEGEEQCGMHINCCNANGPRAFAMIPQFAYQINGRRIDVNLYA HCCHHHHHHCCCCCHHHCCCHHHCCCEEEEECCCCCEEEEEHHHHHHEECCEEEEEEEEE ASSVEVELDKKTRVSMTQETNYPIDGQVRIVVEPEKTSDFTIALRIPAWSERTVVSVNGE ECEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCC PLTDLLAGAYLPIHRTWEKGDEITVELDMRARLVELNEAQAIVRGPLVLARDSRFKDGDV CHHHHHHCCCCCEECCCCCCCEEEEEEECCEEEEECCHHHHHHHCCEEEEECCCCCCCCC DEASVIVSKDGYVELTPVQAPDFAWMAFTVPMVLGTDLEGNGKARPIHLCDFASAGNTWN CCCEEEEECCCEEEEECCCCCCCCHHHEEEHHHCCCCCCCCCCCCEEEEEECCCCCCCCC QAERYRVWLPKTWNVMRTPYKPY CCCCEEEECCCCCCHHCCCCCCC >Mature Secondary Structure SISVLTKGMSCLFFCFCVCCMNAQVRNTDPVRHLRISGYLGQRIDACIEYRVKAQDVDH CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH LVEPFRHKEETLRWQSEFWGKWIQGAIASYRYDKDPELYKIIKNGAESLMETQLPNGYIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC NYSEEAQLNQWDIWGRKYTALGLIAYYDLSGDRKALDAACRVIDHLMTQVGPGKVNIVTT CCCCCCCCCCEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC GNYIGMPSSSVLEPVMYLYNRTRQDKYLDFAKYIVKQWETPEGPRLISKAIADIPVAGRF CCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC PHPKVWFSPENGQKAYEMMSCYEGLLELYKVTKNPLYLSVVEKTMNHIINEEINVAGSGS CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCC AFECWYGGKALQTYPTYHTMETCVTFTWMQICDRMLGLTGNSLYADQIEKAMYNALLASL EEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH KADASQIAKYSPLEGWRHEGEEQCGMHINCCNANGPRAFAMIPQFAYQINGRRIDVNLYA HCCHHHHHHCCCCCHHHCCCHHHCCCEEEEECCCCCEEEEEHHHHHHEECCEEEEEEEEE ASSVEVELDKKTRVSMTQETNYPIDGQVRIVVEPEKTSDFTIALRIPAWSERTVVSVNGE ECEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCC PLTDLLAGAYLPIHRTWEKGDEITVELDMRARLVELNEAQAIVRGPLVLARDSRFKDGDV CHHHHHHCCCCCEECCCCCCCEEEEEEECCEEEEECCHHHHHHHCCEEEEECCCCCCCCC DEASVIVSKDGYVELTPVQAPDFAWMAFTVPMVLGTDLEGNGKARPIHLCDFASAGNTWN CCCEEEEECCCEEEEECCCCCCCCHHHEEEHHHCCCCCCCCCCCCEEEEEECCCCCCCCC QAERYRVWLPKTWNVMRTPYKPY CCCCEEEECCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA