| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007946
Identifier: 150007946
GI number: 150007946
Start: 1516350
End: 1517906
Strand: Direct
Name: 150007946
Synonym: BDI_1307
Alternate gene names: NA
Gene position: 1516350-1517906 (Clockwise)
Preceding gene: 150007945
Following gene: 150007953
Centisome position: 31.52
GC content: 43.35
Gene sequence:
>1557_bases ATGGATGATTTCCGAACCTTGAGACAGCTGATCGTAGGATGGTTGCTGTTACTCGTAGCTCTCATCCCTATGAATGCCCA GAATGGTAACGTACTGGGACAGGTCATACGATTGCCTAAATCAAAAGGAAATATCTACCAATTGCTGGGACTCGTCACGG AACGTTCCGGCTATCTTTTTATATACGACAGTAAGATTATCGATAATGAACAAACAACATCGATAAAAGGTGGAGATTAT ACGATACAAGAAGCTATATACGCTATTACCGGTAATAAAAATCTGGCGATCCGTGCGATAGAGAACCATCTCTTGCTTTA TCTGCCAGAGAGTCCCTCCGCTCCTAAAAGCGCATCCGTAACTCCCGATTCCATACAAACCTATTTCTCGATAGAAGGTT CTTTACAGGATCAATATACCCATGAGCCAATCGCATTCGGATCGGTAGGAATCGGTGAGGCCGCTATTGGCACCATCACC AACCAGAATGGAGAGTTCCGATTGAAATTACCGGACTCACTCCGGTTATCCAAGGTACGTTTCTCTCATATCGGCTATCT TCCCCAAGAGATAGATAGTCGGGAGTTAATAGATAAACATACCGTCTTATCTCTAGAGCCTAAAGTAATCTCTATCCAAG AAGTTATCGTGCGTCTAACCAATCCGAAACGCTTATTACAGGAGATGCTGGACAAGAGAAGAAGCAATTATTCCCAGCAC CCGATTTACCTTACCACATTTTACAGAGAAGGCGTTGAACGTAAAAAAGGACTCGTAGGACTGACCGAGGCTGTTTTTAA GGTATATAAGGCATCTTACCACAGCAATGCCTTGGCCGATCAAGTGAAACTACTAAAGATGCGCCGCATTAGTAACGAGC AGGAAAAGGACACGTTGATCACAAAAATGAAGTCGGGTATCTACTCCTGCCTTGTCTTGGACTTGATGAAACAGTTACCG GAGTTTCTGGATCCTAGCCCGGATTCACCCTATACATACGCCCATACCGACATCACGGTAGTGGATGATCGACTTGCTAA CGTCATCTCTTTCGAGCAACGAAAGAGTATCAATGAACCGCTTTATCGGGGACAGATATATATCGACATGGAAAATAATG CCTTATTAAGGGTGGACTTTGAGGTCAATCCCCAATATATCGAGCAAGCGGCCGGCATGTTCGTCGAGAGAAAAAGCCGG AATTTACGGATCACGCCCCAGAAAGTAGCCTATACGGTATCTTACAAGCAATGGAATGGCACCTACTACATTAACCATAT CCGGGGAGATCTGCATTTTAAAATTAAAAAAAGAAGACAACTTTTTAACACAAATATTTTACATACTTGGTTCGAAATGG TTACCTGTAAGATAGATACAGCCAATGTGAACCGCTTCTCACGCATTGAATCCCTTCCAACCCGCACGGTTTTCTCGGAT ACTCACTTCAACTACGACGAGGGTTTCTGGGGAGATTTTAACGTAATATTACCCGAAGACAAACTGAATGAGGCTATTAG CAGAATCACCTCAAAGATAGAGGAAACGAACTACTAA
Upstream 100 bases:
>100_bases ATAGACGGCTGACCGTTAGTTTCTATAATAACTCACCCGCAACGATGGCTGAACTGATCTGCGCGGCGTTAAAACTAAAA TGTACGCAACAAAATAATAT
Downstream 100 bases:
>100_bases TCCCCTGAAAATCATAAAGAGAGCCTTTTCGCAAAGGCTCTCTTTATAGGTTTTTAATAGGTATTAGTCTTTAAGGCAAA AAGATTGTTTAGGTTATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MDDFRTLRQLIVGWLLLLVALIPMNAQNGNVLGQVIRLPKSKGNIYQLLGLVTERSGYLFIYDSKIIDNEQTTSIKGGDY TIQEAIYAITGNKNLAIRAIENHLLLYLPESPSAPKSASVTPDSIQTYFSIEGSLQDQYTHEPIAFGSVGIGEAAIGTIT NQNGEFRLKLPDSLRLSKVRFSHIGYLPQEIDSRELIDKHTVLSLEPKVISIQEVIVRLTNPKRLLQEMLDKRRSNYSQH PIYLTTFYREGVERKKGLVGLTEAVFKVYKASYHSNALADQVKLLKMRRISNEQEKDTLITKMKSGIYSCLVLDLMKQLP EFLDPSPDSPYTYAHTDITVVDDRLANVISFEQRKSINEPLYRGQIYIDMENNALLRVDFEVNPQYIEQAAGMFVERKSR NLRITPQKVAYTVSYKQWNGTYYINHIRGDLHFKIKKRRQLFNTNILHTWFEMVTCKIDTANVNRFSRIESLPTRTVFSD THFNYDEGFWGDFNVILPEDKLNEAISRITSKIEETNY
Sequences:
>Translated_518_residues MDDFRTLRQLIVGWLLLLVALIPMNAQNGNVLGQVIRLPKSKGNIYQLLGLVTERSGYLFIYDSKIIDNEQTTSIKGGDY TIQEAIYAITGNKNLAIRAIENHLLLYLPESPSAPKSASVTPDSIQTYFSIEGSLQDQYTHEPIAFGSVGIGEAAIGTIT NQNGEFRLKLPDSLRLSKVRFSHIGYLPQEIDSRELIDKHTVLSLEPKVISIQEVIVRLTNPKRLLQEMLDKRRSNYSQH PIYLTTFYREGVERKKGLVGLTEAVFKVYKASYHSNALADQVKLLKMRRISNEQEKDTLITKMKSGIYSCLVLDLMKQLP EFLDPSPDSPYTYAHTDITVVDDRLANVISFEQRKSINEPLYRGQIYIDMENNALLRVDFEVNPQYIEQAAGMFVERKSR NLRITPQKVAYTVSYKQWNGTYYINHIRGDLHFKIKKRRQLFNTNILHTWFEMVTCKIDTANVNRFSRIESLPTRTVFSD THFNYDEGFWGDFNVILPEDKLNEAISRITSKIEETNY >Mature_518_residues MDDFRTLRQLIVGWLLLLVALIPMNAQNGNVLGQVIRLPKSKGNIYQLLGLVTERSGYLFIYDSKIIDNEQTTSIKGGDY TIQEAIYAITGNKNLAIRAIENHLLLYLPESPSAPKSASVTPDSIQTYFSIEGSLQDQYTHEPIAFGSVGIGEAAIGTIT NQNGEFRLKLPDSLRLSKVRFSHIGYLPQEIDSRELIDKHTVLSLEPKVISIQEVIVRLTNPKRLLQEMLDKRRSNYSQH PIYLTTFYREGVERKKGLVGLTEAVFKVYKASYHSNALADQVKLLKMRRISNEQEKDTLITKMKSGIYSCLVLDLMKQLP EFLDPSPDSPYTYAHTDITVVDDRLANVISFEQRKSINEPLYRGQIYIDMENNALLRVDFEVNPQYIEQAAGMFVERKSR NLRITPQKVAYTVSYKQWNGTYYINHIRGDLHFKIKKRRQLFNTNILHTWFEMVTCKIDTANVNRFSRIESLPTRTVFSD THFNYDEGFWGDFNVILPEDKLNEAISRITSKIEETNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59574; Mature: 59574
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDFRTLRQLIVGWLLLLVALIPMNAQNGNVLGQVIRLPKSKGNIYQLLGLVTERSGYLF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEE IYDSKIIDNEQTTSIKGGDYTIQEAIYAITGNKNLAIRAIENHLLLYLPESPSAPKSASV EEECEEECCCCCCEECCCCEEHHHEEEEEECCCCEEEEEEECCEEEEECCCCCCCCCCCC TPDSIQTYFSIEGSLQDQYTHEPIAFGSVGIGEAAIGTITNQNGEFRLKLPDSLRLSKVR CHHHCEEEEEECCCCCCCCCCCCEEECCCCCCCHHEEEEECCCCEEEEECCCCCCHHHHH FSHIGYLPQEIDSRELIDKHTVLSLEPKVISIQEVIVRLTNPKRLLQEMLDKRRSNYSQH HHHHCCCHHHCCCHHHHCCCCEEEECCCEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCC PIYLTTFYREGVERKKGLVGLTEAVFKVYKASYHSNALADQVKLLKMRRISNEQEKDTLI CEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH TKMKSGIYSCLVLDLMKQLPEFLDPSPDSPYTYAHTDITVVDDRLANVISFEQRKSINEP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEHHHHHHHHHHHHHHCCCCC LYRGQIYIDMENNALLRVDFEVNPQYIEQAAGMFVERKSRNLRITPQKVAYTVSYKQWNG CCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHEEECCCCEEECHHHEEEEEEEEEECC TYYINHIRGDLHFKIKKRRQLFNTNILHTWFEMVTCKIDTANVNRFSRIESLPTRTVFSD EEEEEEECCCEEEEEHHHHHHHCCHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCEEECC THFNYDEGFWGDFNVILPEDKLNEAISRITSKIEETNY CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDDFRTLRQLIVGWLLLLVALIPMNAQNGNVLGQVIRLPKSKGNIYQLLGLVTERSGYLF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEE IYDSKIIDNEQTTSIKGGDYTIQEAIYAITGNKNLAIRAIENHLLLYLPESPSAPKSASV EEECEEECCCCCCEECCCCEEHHHEEEEEECCCCEEEEEEECCEEEEECCCCCCCCCCCC TPDSIQTYFSIEGSLQDQYTHEPIAFGSVGIGEAAIGTITNQNGEFRLKLPDSLRLSKVR CHHHCEEEEEECCCCCCCCCCCCEEECCCCCCCHHEEEEECCCCEEEEECCCCCCHHHHH FSHIGYLPQEIDSRELIDKHTVLSLEPKVISIQEVIVRLTNPKRLLQEMLDKRRSNYSQH HHHHCCCHHHCCCHHHHCCCCEEEECCCEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCC PIYLTTFYREGVERKKGLVGLTEAVFKVYKASYHSNALADQVKLLKMRRISNEQEKDTLI CEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH TKMKSGIYSCLVLDLMKQLPEFLDPSPDSPYTYAHTDITVVDDRLANVISFEQRKSINEP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEHHHHHHHHHHHHHHCCCCC LYRGQIYIDMENNALLRVDFEVNPQYIEQAAGMFVERKSRNLRITPQKVAYTVSYKQWNG CCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHEEECCCCEEECHHHEEEEEEEEEECC TYYINHIRGDLHFKIKKRRQLFNTNILHTWFEMVTCKIDTANVNRFSRIESLPTRTVFSD EEEEEEECCCEEEEEHHHHHHHCCHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCEEECC THFNYDEGFWGDFNVILPEDKLNEAISRITSKIEETNY CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA