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The map label for this gene is oxyR [H]

Identifier: 150007942

GI number: 150007942

Start: 1512614

End: 1513540

Strand: Direct

Name: oxyR [H]

Synonym: BDI_1303

Alternate gene names: 150007942

Gene position: 1512614-1513540 (Clockwise)

Preceding gene: 150007939

Following gene: 150007943

Centisome position: 31.44

GC content: 46.6

Gene sequence:

>927_bases
ATGAATATACAGCAACTCGAATATATCCTAGCGGTGGATACTTATCGTCATTTCGCAAAGGCAGCAGAGCATTGTAGGGT
GACACAACCGACATTGAGTATGATGATCCAAAAGCTGGAAGACGAACTAGGTATTAAATTGTTCGATCGAAACCTACAAC
CCGTTCGCCCCACACCTGCCGGACGTAAGGTTATTGAGCAAGCGAGAAATGTCCTCTATCAGGCTTCTCTTATCAAAGAT
ATCGTGAACGAGGAGGAACAGTCATTGAAAGGTACGTTCCGCTTAGCGGTGCTACCGACTATCGCCCCTTATTTACTACC
TCGCTTTTTCCAGCAATTATCGGAAAAGCATACGGATCTTGACATCCGTATGCTGGAAATGAAAACCGCTCCCACTATGG
CCGCCCTGCAAAACGGGGAAATCGACGCCGCTATCATAGCGAACCAACCCACTGAATCCAATTTACAAGGAGATATATTA
TATTATGAGCAATTCTTCGGATACGTGGCTCACAACGAATCTATATTCAAAAAGGATTTGATCCGTACCGCCGATATCAA
CGACGAGCGGTTGTGGCTGTTGGACGAGGGACATTGCTTCCGTGACCAGCTGATGCGTTTCTGCCAGATGGAGAAGGTAA
AGGTTCGCCAAGCCGCTTACCGTTTAGGTAGCCTAGAGACATTTATGCGTATGGTGGAAAGCGGTAACGGTATTACGTTC
ATCCCGGAATTGGCTACCCTGCAGTTAAGTAAAGAGCAGAAAGAATTGGTACGTCCGTTCGCCATTCCCAAGCCGACACG
GGAGATCGTCTTTGTCACCCGTAAAGATTTTATCCGGCATACCGTAGCGGGTATTTTAATAGAGAGCATCAAGAAAGCGG
TACCTAAAGAAATGTTGACTTTGCAGCCCGGACAAAAGGTTGTGTGA

Upstream 100 bases:

>100_bases
CAAATTAAGTTGCTTTATTCTTCCACTTTTATTCGATTATTCCAGCGTTTTTCCGTAAGTTTGTCTTCATTAATTTCTAA
CGCTTGTAAAATTAAGTACT

Downstream 100 bases:

>100_bases
TTTTTTTGATAAATCCCATAGGGTATTTCTTTCCTGGGCGATCATATAAGTACAAAGTGATTATTTACCATTAAAACAAT
ACAAATATGAAAGCGCTCTG

Product: redox-sensitive transcriptional activator OxyR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNIQQLEYILAVDTYRHFAKAAEHCRVTQPTLSMMIQKLEDELGIKLFDRNLQPVRPTPAGRKVIEQARNVLYQASLIKD
IVNEEEQSLKGTFRLAVLPTIAPYLLPRFFQQLSEKHTDLDIRMLEMKTAPTMAALQNGEIDAAIIANQPTESNLQGDIL
YYEQFFGYVAHNESIFKKDLIRTADINDERLWLLDEGHCFRDQLMRFCQMEKVKVRQAAYRLGSLETFMRMVESGNGITF
IPELATLQLSKEQKELVRPFAIPKPTREIVFVTRKDFIRHTVAGILIESIKKAVPKEMLTLQPGQKVV

Sequences:

>Translated_308_residues
MNIQQLEYILAVDTYRHFAKAAEHCRVTQPTLSMMIQKLEDELGIKLFDRNLQPVRPTPAGRKVIEQARNVLYQASLIKD
IVNEEEQSLKGTFRLAVLPTIAPYLLPRFFQQLSEKHTDLDIRMLEMKTAPTMAALQNGEIDAAIIANQPTESNLQGDIL
YYEQFFGYVAHNESIFKKDLIRTADINDERLWLLDEGHCFRDQLMRFCQMEKVKVRQAAYRLGSLETFMRMVESGNGITF
IPELATLQLSKEQKELVRPFAIPKPTREIVFVTRKDFIRHTVAGILIESIKKAVPKEMLTLQPGQKVV
>Mature_308_residues
MNIQQLEYILAVDTYRHFAKAAEHCRVTQPTLSMMIQKLEDELGIKLFDRNLQPVRPTPAGRKVIEQARNVLYQASLIKD
IVNEEEQSLKGTFRLAVLPTIAPYLLPRFFQQLSEKHTDLDIRMLEMKTAPTMAALQNGEIDAAIIANQPTESNLQGDIL
YYEQFFGYVAHNESIFKKDLIRTADINDERLWLLDEGHCFRDQLMRFCQMEKVKVRQAAYRLGSLETFMRMVESGNGITF
IPELATLQLSKEQKELVRPFAIPKPTREIVFVTRKDFIRHTVAGILIESIKKAVPKEMLTLQPGQKVV

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=274, Percent_Identity=35.036496350365, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI157672245, Length=244, Percent_Identity=26.2295081967213, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI145693105, Length=261, Percent_Identity=25.2873563218391, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788748, Length=290, Percent_Identity=22.7586206896552, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787530, Length=147, Percent_Identity=32.6530612244898, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787879, Length=254, Percent_Identity=24.8031496062992, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367136, Length=247, Percent_Identity=25.9109311740891, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081904, Length=301, Percent_Identity=21.5946843853821, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788297, Length=261, Percent_Identity=25.2873563218391, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1790208, Length=255, Percent_Identity=25.8823529411765, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35466; Mature: 35466

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQQLEYILAVDTYRHFAKAAEHCRVTQPTLSMMIQKLEDELGIKLFDRNLQPVRPTPA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC
GRKVIEQARNVLYQASLIKDIVNEEEQSLKGTFRLAVLPTIAPYLLPRFFQQLSEKHTDL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIRMLEMKTAPTMAALQNGEIDAAIIANQPTESNLQGDILYYEQFFGYVAHNESIFKKDL
CEEEEEECCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
IRTADINDERLWLLDEGHCFRDQLMRFCQMEKVKVRQAAYRLGSLETFMRMVESGNGITF
HHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEE
IPELATLQLSKEQKELVRPFAIPKPTREIVFVTRKDFIRHTVAGILIESIKKAVPKEMLT
ECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHC
LQPGQKVV
CCCCCCCC
>Mature Secondary Structure
MNIQQLEYILAVDTYRHFAKAAEHCRVTQPTLSMMIQKLEDELGIKLFDRNLQPVRPTPA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC
GRKVIEQARNVLYQASLIKDIVNEEEQSLKGTFRLAVLPTIAPYLLPRFFQQLSEKHTDL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DIRMLEMKTAPTMAALQNGEIDAAIIANQPTESNLQGDILYYEQFFGYVAHNESIFKKDL
CEEEEEECCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
IRTADINDERLWLLDEGHCFRDQLMRFCQMEKVKVRQAAYRLGSLETFMRMVESGNGITF
HHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEE
IPELATLQLSKEQKELVRPFAIPKPTREIVFVTRKDFIRHTVAGILIESIKKAVPKEMLT
ECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHC
LQPGQKVV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8890216 [H]