| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007897
Identifier: 150007897
GI number: 150007897
Start: 1457210
End: 1457812
Strand: Reverse
Name: 150007897
Synonym: BDI_1257
Alternate gene names: NA
Gene position: 1457812-1457210 (Counterclockwise)
Preceding gene: 150007899
Following gene: 150007896
Centisome position: 30.3
GC content: 50.41
Gene sequence:
>603_bases ATGAACAACGAACTGAAAGTGTCCTTTTACATCAAAAGGGAAAAGAGCGCAACCAACGCCTGCGGCATTTATCCGGTGAT TGGCAAAATCATTGTCGGCGGTACGTTAGCCCAGTTCAGCAGCAAGCTGAAAGTCGATGAACGCCTGTGGGATGTCAAGT CAGGACGTGCGACCGGAAAGAGCAGGCAAGCCGTTGAGCTGAACCGGGCGATAAACAGGATAAACCTTGCCATTCATGCC AGCTACAAGGACATCTTGAAGCGGACGGGCAAAGTCACAGCCGTGGAGGTAAAGAACGCCTTTCAGGGTGTCGCAACCGC ACAGACGACTGTCATTGCCCTGTTTGAGGAAATGATGCGGGATTTCAAGGCGAGGACGGGCATAGACCGGGCGGAATCGA CTTACAAGCAGTACGAGGTGCTGCACGACCAACTGAAAGACTTCCTGAAAATACAGTACCACGCAAGCGACATACCGTTT ACAGAACTGGACTTGCCTTTCATCGAATCTTTGGACTTCTATTTCAGGGTAAGGCGCAAAATGAAAGCAAGAACCGTCAA ATCAAGGCTCGTGCTGTTTAACAAAGTCGTCCTGCTGGGATAG
Upstream 100 bases:
>100_bases GTTGTCCGAAAATGACCGGGAAAGTCCTTATTTGTCTGTGTTTCACATTGTTCTAAAACTCACGAAAGCAGTAATTTTAC AAACTTAAAAATGAGTGATT
Downstream 100 bases:
>100_bases TAAAAAGAAAGAGAATTTGAAAGCTGAAATCAGCAATTTGATAAATACATAAGACTATGCACATAGACTTTGCCTCGCCA TCGAACGGAACATATAACAA
Product: tyrosine type site-specific recombinase
Products: NA
Alternate protein names: Tyrosine Type Site-Specific Recombinase; Transposase; Site-Specific Recombinase; Integrase Family Protein; Bacteriophage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein; Phage Integrase
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MNNELKVSFYIKREKSATNACGIYPVIGKIIVGGTLAQFSSKLKVDERLWDVKSGRATGKSRQAVELNRAINRINLAIHA SYKDILKRTGKVTAVEVKNAFQGVATAQTTVIALFEEMMRDFKARTGIDRAESTYKQYEVLHDQLKDFLKIQYHASDIPF TELDLPFIESLDFYFRVRRKMKARTVKSRLVLFNKVVLLG
Sequences:
>Translated_200_residues MNNELKVSFYIKREKSATNACGIYPVIGKIIVGGTLAQFSSKLKVDERLWDVKSGRATGKSRQAVELNRAINRINLAIHA SYKDILKRTGKVTAVEVKNAFQGVATAQTTVIALFEEMMRDFKARTGIDRAESTYKQYEVLHDQLKDFLKIQYHASDIPF TELDLPFIESLDFYFRVRRKMKARTVKSRLVLFNKVVLLG >Mature_200_residues MNNELKVSFYIKREKSATNACGIYPVIGKIIVGGTLAQFSSKLKVDERLWDVKSGRATGKSRQAVELNRAINRINLAIHA SYKDILKRTGKVTAVEVKNAFQGVATAQTTVIALFEEMMRDFKARTGIDRAESTYKQYEVLHDQLKDFLKIQYHASDIPF TELDLPFIESLDFYFRVRRKMKARTVKSRLVLFNKVVLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22840; Mature: 22840
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS00591 GLYCOSYL_HYDROL_F10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNELKVSFYIKREKSATNACGIYPVIGKIIVGGTLAQFSSKLKVDERLWDVKSGRATGK CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCC SRQAVELNRAINRINLAIHASYKDILKRTGKVTAVEVKNAFQGVATAQTTVIALFEEMMR CCHHHHHHHHHHHHHHEEECCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH DFKARTGIDRAESTYKQYEVLHDQLKDFLKIQYHASDIPFTELDLPFIESLDFYFRVRRK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH MKARTVKSRLVLFNKVVLLG HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNELKVSFYIKREKSATNACGIYPVIGKIIVGGTLAQFSSKLKVDERLWDVKSGRATGK CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCC SRQAVELNRAINRINLAIHASYKDILKRTGKVTAVEVKNAFQGVATAQTTVIALFEEMMR CCHHHHHHHHHHHHHHEEECCHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH DFKARTGIDRAESTYKQYEVLHDQLKDFLKIQYHASDIPFTELDLPFIESLDFYFRVRRK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH MKARTVKSRLVLFNKVVLLG HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA