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The map label for this gene is yebC [C]

Identifier: 150007873

GI number: 150007873

Start: 1430211

End: 1430942

Strand: Reverse

Name: yebC [C]

Synonym: BDI_1233

Alternate gene names: 150007873

Gene position: 1430942-1430211 (Counterclockwise)

Preceding gene: 150007874

Following gene: 150007872

Centisome position: 29.74

GC content: 45.22

Gene sequence:

>732_bases
ATGGGAAGAGCGTTTGAGTTTCGTAAAGCGAGAAAGTTTAAGCGTTGGGGCAATATGGCCCGTGTATTCACGAAGTTAGG
TAAGGAAATCACGATCGCGGCAAAACAAGGTGGGCCGGAGCCCGAGAATAATCCTCGTTTACGTGTGTTGATGCAGAACG
CCAAAAAGGAGAATATGCCGAAGGAGAACGTGGAGCGTGCCATTAAACGTGCCGTATCCAAGGATTTCACGGATTATAAG
GAGATGAACTATGAGGGATATGGTCCTTTCGGTATCGCTATCTTCGTTGAGACCGCTACGGATAATACGACTCGTACGGT
AGCCAACGTTCGTAGTTATTTCAATAAGAACGGTGGTTCTCTGGGAACATCCGGTAGCTTGGAGTTCTTGTTCGACCATA
AATGCGTATTCCATATCGCCAAAAAAGAGGATCTTTCTTTAGAAGACCTAGAGTTGGAGTTGATCGACTTCGGTGTAGAT
GAGGTTGAGGAAGACGAGGACGAGGTTGTTCTTTATGGTGAGTTCGCGCAGAATTCGGCGATCCAGAAATATTTGGAGGA
GAATGGTTTTGAGATCTTGAGTAGTGAGTTCGTACGTATCCCGAACGATTTGAAGGAGGTTACTCCGGAACAGCGTGAGT
CTATCGAGAAGATTATCGAGAAATTAGAGGAAGACGAAGACGTTCAAAACGTATTCCATAATATGAAGGAAGACGATTCT
GAGGAGGAATAA

Upstream 100 bases:

>100_bases
CGCTATCATGAAGAAGATCCAGACGAATCTGGAACAAAAGCTAGGTGCTCAATTGAGATAAGAATTTAATTACATAAAAT
AAAGATAAACTGATAAACAT

Downstream 100 bases:

>100_bases
CGTACGCTTATACGTAAAATAGTATACTTTATCCGTAAAAAAGCGACATCGAGGCAAATTCGATGTCGCTTTTTCTTTTT
TACAACGAATGTTTCATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGRAFEFRKARKFKRWGNMARVFTKLGKEITIAAKQGGPEPENNPRLRVLMQNAKKENMPKENVERAIKRAVSKDFTDYK
EMNYEGYGPFGIAIFVETATDNTTRTVANVRSYFNKNGGSLGTSGSLEFLFDHKCVFHIAKKEDLSLEDLELELIDFGVD
EVEEDEDEVVLYGEFAQNSAIQKYLEENGFEILSSEFVRIPNDLKEVTPEQRESIEKIIEKLEEDEDVQNVFHNMKEDDS
EEE

Sequences:

>Translated_243_residues
MGRAFEFRKARKFKRWGNMARVFTKLGKEITIAAKQGGPEPENNPRLRVLMQNAKKENMPKENVERAIKRAVSKDFTDYK
EMNYEGYGPFGIAIFVETATDNTTRTVANVRSYFNKNGGSLGTSGSLEFLFDHKCVFHIAKKEDLSLEDLELELIDFGVD
EVEEDEDEVVLYGEFAQNSAIQKYLEENGFEILSSEFVRIPNDLKEVTPEQRESIEKIIEKLEEDEDVQNVFHNMKEDDS
EEE
>Mature_242_residues
GRAFEFRKARKFKRWGNMARVFTKLGKEITIAAKQGGPEPENNPRLRVLMQNAKKENMPKENVERAIKRAVSKDFTDYKE
MNYEGYGPFGIAIFVETATDNTTRTVANVRSYFNKNGGSLGTSGSLEFLFDHKCVFHIAKKEDLSLEDLELELIDFGVDE
VEEDEDEVVLYGEFAQNSAIQKYLEENGFEILSSEFVRIPNDLKEVTPEQRESIEKIIEKLEEDEDVQNVFHNMKEDDSE
EE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=226, Percent_Identity=29.646017699115, Blast_Score=98, Evalue=6e-21,
Organism=Escherichia coli, GI1788171, Length=225, Percent_Identity=36, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=35.1694915254237, Blast_Score=144, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17556100, Length=222, Percent_Identity=25.6756756756757, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321458, Length=250, Percent_Identity=29.6, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1233_PARD8 (A6LBD0)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001302616.1
- ProteinModelPortal:   A6LBD0
- SMR:   A6LBD0
- STRING:   A6LBD0
- GeneID:   5306386
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_1233
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   EEVGDKI
- ProtClustDB:   PRK12378
- BioCyc:   PDIS435591:BDI_1233-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 28028; Mature: 27896

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAFEFRKARKFKRWGNMARVFTKLGKEITIAAKQGGPEPENNPRLRVLMQNAKKENMP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
KENVERAIKRAVSKDFTDYKEMNYEGYGPFGIAIFVETATDNTTRTVANVRSYFNKNGGS
HHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCC
LGTSGSLEFLFDHKCVFHIAKKEDLSLEDLELELIDFGVDEVEEDEDEVVLYGEFAQNSA
CCCCCCEEEEECCHHHEEECCCCCCCHHHHHHHHHHCCCHHCCCCCCCEEEEECHHHHHH
IQKYLEENGFEILSSEFVRIPNDLKEVTPEQRESIEKIIEKLEEDEDVQNVFHNMKEDDS
HHHHHHHCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
EEE
CCC
>Mature Secondary Structure 
GRAFEFRKARKFKRWGNMARVFTKLGKEITIAAKQGGPEPENNPRLRVLMQNAKKENMP
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
KENVERAIKRAVSKDFTDYKEMNYEGYGPFGIAIFVETATDNTTRTVANVRSYFNKNGGS
HHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCC
LGTSGSLEFLFDHKCVFHIAKKEDLSLEDLELELIDFGVDEVEEDEDEVVLYGEFAQNSA
CCCCCCEEEEECCHHHEEECCCCCCCHHHHHHHHHHCCCHHCCCCCCCEEEEECHHHHHH
IQKYLEENGFEILSSEFVRIPNDLKEVTPEQRESIEKIIEKLEEDEDVQNVFHNMKEDDS
HHHHHHHCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
EEE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA