Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 150007866

GI number: 150007866

Start: 1419989

End: 1420753

Strand: Direct

Name: yaaA [C]

Synonym: BDI_1226

Alternate gene names: 150007866

Gene position: 1419989-1420753 (Clockwise)

Preceding gene: 150007862

Following gene: 150007867

Centisome position: 29.51

GC content: 48.37

Gene sequence:

>765_bases
ATGTTGATATTATTATCTCCGGCTAAGACAATGACCGGGACATCCAAGATAAAAGCGCCGCAAGGCACGACTCCACGTTT
CCAGCAAGAGGCGAACGAGATCGCCCTGCATATGACCCAATTTCCCATTGACGAATTAAGTCGTATCCTCAAGCTCAGCC
CGAAACTGGCGGCGGAATGTTACCGCAGATACCAAGATTTTCATGCGGAAGACAAACAGCCCTTGCAAGCGATACTCGCC
TATACCGGTGTCGTATTCAAGAATATCAGCCCGAAAGACTTCACGGAGGAGGATTTTCTTTTCTCGCAAGAACATATGCG
TTTCGTATCGGGATGCTACGGGTTACTTCGCCCATTAGACCTTATCAAGCCTTACCGGATGGAGTTCGACGTAAAAATCC
CGGAACTAGGCGACGGGAATATGTACGCCTTCTGGAAGGACAGGCAAACAAATACATTAATCCATGACGTCCGACAGGGA
GACAGAATCCTACTGAATCTAGCCAGCTTGGATATCCAACCCTCTTTCCAGTGGAAGGAGGTGGAGCGATCCGTCCGGAT
CATCACGCCCGAGTTCAAGATCTGGAAGAACGGCAAAGCGGAGACGATCGTGATCTATGCCAAGATGTGCAGGGGACAAA
TGAGCCGCTATCTCATAAAGAACCGGATTTCTGACCCGGAGGCATTAAAAGCATTCACATGGGAAGGCTTTTCCTATAAA
GAATCCATGTCCGAGGGGGATAATTGGGTATTTCTACAAGAATAA

Upstream 100 bases:

>100_bases
ATTCGAGTCGAGATACTTTAAGATTTATTGGGATACTTATACCCTATTTGAATCTTAATATGGATTACCTTTATGCGATC
AATCCAAATCCAATATAGAT

Downstream 100 bases:

>100_bases
TTCTAGGCTTATCCAATAAAATCAGATGATCTACGTTTTATAAAAACAATTCGTAAAAATCATAAAAAGGTTTATCCTTC
TTTAATTTAGCGGTGATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLILLSPAKTMTGTSKIKAPQGTTPRFQQEANEIALHMTQFPIDELSRILKLSPKLAAECYRRYQDFHAEDKQPLQAILA
YTGVVFKNISPKDFTEEDFLFSQEHMRFVSGCYGLLRPLDLIKPYRMEFDVKIPELGDGNMYAFWKDRQTNTLIHDVRQG
DRILLNLASLDIQPSFQWKEVERSVRIITPEFKIWKNGKAETIVIYAKMCRGQMSRYLIKNRISDPEALKAFTWEGFSYK
ESMSEGDNWVFLQE

Sequences:

>Translated_254_residues
MLILLSPAKTMTGTSKIKAPQGTTPRFQQEANEIALHMTQFPIDELSRILKLSPKLAAECYRRYQDFHAEDKQPLQAILA
YTGVVFKNISPKDFTEEDFLFSQEHMRFVSGCYGLLRPLDLIKPYRMEFDVKIPELGDGNMYAFWKDRQTNTLIHDVRQG
DRILLNLASLDIQPSFQWKEVERSVRIITPEFKIWKNGKAETIVIYAKMCRGQMSRYLIKNRISDPEALKAFTWEGFSYK
ESMSEGDNWVFLQE
>Mature_254_residues
MLILLSPAKTMTGTSKIKAPQGTTPRFQQEANEIALHMTQFPIDELSRILKLSPKLAAECYRRYQDFHAEDKQPLQAILA
YTGVVFKNISPKDFTEEDFLFSQEHMRFVSGCYGLLRPLDLIKPYRMEFDVKIPELGDGNMYAFWKDRQTNTLIHDVRQG
DRILLNLASLDIQPSFQWKEVERSVRIITPEFKIWKNGKAETIVIYAKMCRGQMSRYLIKNRISDPEALKAFTWEGFSYK
ESMSEGDNWVFLQE

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=254, Percent_Identity=37.007874015748, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1226_PARD8 (A6LBC3)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001302609.1
- STRING:   A6LBC3
- GeneID:   5306379
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_1226
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- BioCyc:   PDIS435591:BDI_1226-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29606; Mature: 29606

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILLSPAKTMTGTSKIKAPQGTTPRFQQEANEIALHMTQFPIDELSRILKLSPKLAAEC
CEEEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHEEHHHCCCHHHHHHHHHCCHHHHHHH
YRRYQDFHAEDKQPLQAILAYTGVVFKNISPKDFTEEDFLFSQEHMRFVSGCYGLLRPLD
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIKPYRMEFDVKIPELGDGNMYAFWKDRQTNTLIHDVRQGDRILLNLASLDIQPSFQWKE
HCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHH
VERSVRIITPEFKIWKNGKAETIVIYAKMCRGQMSRYLIKNRISDPEALKAFTWEGFSYK
HCCCEEEECCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCHH
ESMSEGDNWVFLQE
HHHCCCCCEEEEEC
>Mature Secondary Structure
MLILLSPAKTMTGTSKIKAPQGTTPRFQQEANEIALHMTQFPIDELSRILKLSPKLAAEC
CEEEECCCCHHCCCCCCCCCCCCCCHHHHHHHHHEEHHHCCCHHHHHHHHHCCHHHHHHH
YRRYQDFHAEDKQPLQAILAYTGVVFKNISPKDFTEEDFLFSQEHMRFVSGCYGLLRPLD
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LIKPYRMEFDVKIPELGDGNMYAFWKDRQTNTLIHDVRQGDRILLNLASLDIQPSFQWKE
HCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHH
VERSVRIITPEFKIWKNGKAETIVIYAKMCRGQMSRYLIKNRISDPEALKAFTWEGFSYK
HCCCEEEECCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCHH
ESMSEGDNWVFLQE
HHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA