| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yeiA [H]
Identifier: 150007812
GI number: 150007812
Start: 1362206
End: 1363699
Strand: Direct
Name: yeiA [H]
Synonym: BDI_1170
Alternate gene names: 150007812
Gene position: 1362206-1363699 (Clockwise)
Preceding gene: 150007811
Following gene: 150007813
Centisome position: 28.31
GC content: 55.35
Gene sequence:
>1494_bases ATGAAGACAAACCTCCTCCAGAGAAAACGCCTCCTAACGGAAGAATCGAATCGCTGTTATCTGTGCGATGCCCCTGTCTG CACAAAGGCATGCAAGCCCGGACTAGATCCGGGCCGCTTGCTGCGGGCCTGTAAAATGGACAACCTAGCGGGAGCTATCC TCCGGGCCTACCAGATGGAAGCCTGCAGGGATTGCGACGGGTATCCTTGCGAGAAGGCCTGCCTCCGCGGACGAACCGAC CGGGCGATATCCATCACTCAAATCGTACGGCAATTGCAAGATATGCCAAACCCGACGGATAGTTCTCCCCTCACTTCGTC TCCGGACTTGGCGATCGACTTTTGCGGCATCCGCTGCGCCAACCCCTTTATACTGGCCTCCTCGCCCGTAGCCCATAATT ACGAGATGTGCGTCCGGGCCCTCGAAGCCGGTTGGGCCGGTATCTGCTTCAAGACGATATCATTCTATCCGAGCCATGAG GTATCCCCCCGCTTCGACCAAATGGAGGTGGATGGCGTGCCTTTCATCGGATTCAAGAACATGGAACAATTGTCGGAAGC CTCTGTCGAAGAGAATTTCGATACTCTCTATCGCCTCAAGCAACGCTATCCTGACAAATTAATCATCTCCTCCATTATGG GACGGACAGACGATGAGTGGACACGGCTTGCCCAATATTCCACGCAGGCTGGGGCCGATATCATTGAGTGCAACTTCTCT TGCCCACAAATGACGCAAGAAGGGATGGGCAGCGACGTAGGACAAAGCCCGGAACTGGTACGCCGGTTCACCGCCGCCAC ACGCCGGGGTACCCATCTGCCGATACTAGCGAAGATGACACCGAATATCGGGCAGATGACACCCGTGGCGCTCGCCGCCC ACGAAGGAGGAGCCACCGGGATAGCCGCCATCAACACCATCAAATGTATCACCCGTATCGATGAGAAAGCACTTACGGCC CGGCCCGTTGTCTGCGGACTGAGCAGCGTGTCCGGCTATTCGGGGAAAGCCGTGCGCCCTATCGCTCTCCGGTTCATACA TGAGCTGGCGAGCGATCCTTCTGCCGGCAAGATGCCTATCAGCGGGATAGGCGGTATAGAGACTTGGCGGGATGCCCTCG ATTTCCTGCTACTAGGCTGCACGAACCTACAGATATGTACCGCCGTGATGCAATACGGCTTCCGGATCATCGACGATCTA TGCGAAGGGTTACGACTGTTCATGCAAGAGAACGGATATAAAACCCTATCCGACCTCATAGGTATCGCTTTACCGAACAT CGTACCCCCCGAGAAACTGGAACGTACGCAGATACACCGCCCGACAGTAGATAACAGCCTATGCCTCGGCTGCGGACGCT GTTTCGTTTCCTGTAACGACGGTGGACATCAAGCTATCCGTTTCACCTCTATGCGCAAACCGGTGATAGACGAGCAAAAA TGTGTCGGCTGCCATCTTTGCGCATTAGTATGCCCAACCTTCGCCATACATTGA
Upstream 100 bases:
>100_bases AAGCAATCTTCAGCCTGCCCGGACACCTGTACACCGTGGAGGTCGTGACCGAACGTTACCGGAAAGTACAGAAAGTAGTG AGATAATACAGTTAGAAGCC
Downstream 100 bases:
>100_bases CAGGATGAGGATCGAGACGGGACACCTTATTCTACTATCCATACTTCTTCTGTGCCCGCTAGTCCATTCAGACCTGCGGG CACAAGAGAAGACACCCGTC
Product: dihydropyrimidine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MKTNLLQRKRLLTEESNRCYLCDAPVCTKACKPGLDPGRLLRACKMDNLAGAILRAYQMEACRDCDGYPCEKACLRGRTD RAISITQIVRQLQDMPNPTDSSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSHE VSPRFDQMEVDGVPFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIMGRTDDEWTRLAQYSTQAGADIIECNFS CPQMTQEGMGSDVGQSPELVRRFTAATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTA RPVVCGLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICTAVMQYGFRIIDDL CEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRFTSMRKPVIDEQK CVGCHLCALVCPTFAIH
Sequences:
>Translated_497_residues MKTNLLQRKRLLTEESNRCYLCDAPVCTKACKPGLDPGRLLRACKMDNLAGAILRAYQMEACRDCDGYPCEKACLRGRTD RAISITQIVRQLQDMPNPTDSSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSHE VSPRFDQMEVDGVPFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIMGRTDDEWTRLAQYSTQAGADIIECNFS CPQMTQEGMGSDVGQSPELVRRFTAATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTA RPVVCGLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICTAVMQYGFRIIDDL CEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRFTSMRKPVIDEQK CVGCHLCALVCPTFAIH >Mature_497_residues MKTNLLQRKRLLTEESNRCYLCDAPVCTKACKPGLDPGRLLRACKMDNLAGAILRAYQMEACRDCDGYPCEKACLRGRTD RAISITQIVRQLQDMPNPTDSSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSHE VSPRFDQMEVDGVPFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIMGRTDDEWTRLAQYSTQAGADIIECNFS CPQMTQEGMGSDVGQSPELVRRFTAATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTA RPVVCGLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICTAVMQYGFRIIDDL CEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRFTSMRKPVIDEQK CVGCHLCALVCPTFAIH
Specific function: Unknown
COG id: COG0167
COG function: function code F; Dihydroorotate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=334, Percent_Identity=35.9281437125749, Blast_Score=192, Evalue=8e-49, Organism=Escherichia coli, GI87082059, Length=392, Percent_Identity=55.1020408163265, Blast_Score=464, Evalue=1e-132, Organism=Caenorhabditis elegans, GI71984108, Length=344, Percent_Identity=36.046511627907, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24640763, Length=350, Percent_Identity=36.2857142857143, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI18858217, Length=350, Percent_Identity=36.2857142857143, Blast_Score=199, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013785 - InterPro: IPR005720 - InterPro: IPR012135 - InterPro: IPR012285 [H]
Pfam domain/function: PF01180 DHO_dh [H]
EC number: NA
Molecular weight: Translated: 54627; Mature: 54627
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNLLQRKRLLTEESNRCYLCDAPVCTKACKPGLDPGRLLRACKMDNLAGAILRAYQME CCCHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ACRDCDGYPCEKACLRGRTDRAISITQIVRQLQDMPNPTDSSPLTSSPDLAIDFCGIRCA HHHCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEC NPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSHEVSPRFDQMEVDGVPFIGFKN CCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCC MEQLSEASVEENFDTLYRLKQRYPDKLIISSIMGRTDDEWTRLAQYSTQAGADIIECNFS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCC CPQMTQEGMGSDVGQSPELVRRFTAATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATG CHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCH IAAINTIKCITRIDEKALTARPVVCGLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPI HHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC SGIGGIETWRDALDFLLLGCTNLQICTAVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLI CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRFTSMRKPVIDEQK HHHCCCCCCHHHHHHHHCCCCCCCCCHHEECCEEEEEECCCCCCEEEECCCCCCCCCCHH CVGCHLCALVCPTFAIH HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTNLLQRKRLLTEESNRCYLCDAPVCTKACKPGLDPGRLLRACKMDNLAGAILRAYQME CCCHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ACRDCDGYPCEKACLRGRTDRAISITQIVRQLQDMPNPTDSSPLTSSPDLAIDFCGIRCA HHHCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEC NPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSHEVSPRFDQMEVDGVPFIGFKN CCEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCC MEQLSEASVEENFDTLYRLKQRYPDKLIISSIMGRTDDEWTRLAQYSTQAGADIIECNFS HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCC CPQMTQEGMGSDVGQSPELVRRFTAATRRGTHLPILAKMTPNIGQMTPVALAAHEGGATG CHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCH IAAINTIKCITRIDEKALTARPVVCGLSSVSGYSGKAVRPIALRFIHELASDPSAGKMPI HHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC SGIGGIETWRDALDFLLLGCTNLQICTAVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLI CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GIALPNIVPPEKLERTQIHRPTVDNSLCLGCGRCFVSCNDGGHQAIRFTSMRKPVIDEQK HHHCCCCCCHHHHHHHHCCCCCCCCCHHEECCEEEEEECCCCCCEEEECCCCCCCCCCHH CVGCHLCALVCPTFAIH HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 1719366 [H]