| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007747
Identifier: 150007747
GI number: 150007747
Start: 1280128
End: 1282437
Strand: Direct
Name: 150007747
Synonym: BDI_1105
Alternate gene names: NA
Gene position: 1280128-1282437 (Clockwise)
Preceding gene: 150007746
Following gene: 150007749
Centisome position: 26.61
GC content: 45.58
Gene sequence:
>2310_bases ATGAAACAAATCATTATGGCGGCCCTTCTTATATCTTTTTCTTGGGGTATCCGGGCACAGCAATTACAGATCAGGGGGAA AGTCATTGATCTATCCGACAAGTCTCCTCTTGAGTTTGCGAATATCACGCTTCAAACAGCCGATTCCGCATTTATCACAG GGACGACGACGGATAGTAAAGGACTTTTCCGGATCGAGAAAGTCAAGGCCGGAGATTATCAAGTATCTGTTTCCTCCATA GGTTACAAGACCTCGGTAGTCTCCGTGCTGGGACTTTCCCAGCCTATAGATCTCGGTACGATCTCATTGGCATCCTCCTC TATATCCTTAGATGAAGTCACGGTCAACGCTTCCGCTATCCGCAATACGGCGGACCGTAAGATCACGTTCCCTACCTCTG AGCAAAAAGCGGCTTCCAGCAATGGCATCAACCTATTGAACGCCTTGATGCTTCCTCGTTTGGAAGTAGACCCGATTCGG AATAGCGTATCGCTACCGAATGAAGGGACTATTCAATTCTGCATCAACGGTATCAAGGTGGAGCTATCCGATATCCGGGG CTTATCGCCACAGGAGGTAATCCGGGTAGAATATCATGATAATCCGGGCTTACGTTACGGTAACGCCTCTGTCGTACTCG ACTACATTGTCCGGAGGGAAACTAGCGGCGGTTCTGTCAATCTGGATCTTAGTAATTCACCGACCACCTCTTTTGGAGAC GATCAGGTATCGACGAAGTTCAATCATAAGAAATCGGAGTTCGGATTGCAATACGCCGTCCGTTACCGGAATCCGTATCA TATCTGGACGGAAGGAGTCGAGACCTTCCGCTTTGAGAGTGGCGAGACGATGGAACGTACCTCGGAAGGTCTGCCAAGAG GAATGTCCGAGACCGCTCATAACCTCTCTCTTAATTATAATCTGGTAGATAACGACCATTATTATTTCAATGCTACGCTA CGCTATTTCTTATCAGACGAGGATAAAGGTGGCGGCAAGAACCTGTATACCAACAATAATCCCGAGGATAAGACATACGC TTGGAATCCAAATAGCAACTCTACCAAACGTCCTTCCCTCGACCTTTATTACCAACGCTCCTTACCACATAAGCAGACAT TGATACTTAATATGGTAGGTACGTACATACATACGAACGCAAACCAAATGTATCAAGAATGGAAAAACGATATCCTCTTA TCGGATATCTTGTCGAACGTGGACGGAGACAAATATTCCATCATCGGCGAGGGAATCTACGAACGGCAATTCGAGGCCGG TCGATTGGGAGGAGGATTGAAACACACCCAATCGTGGACGGATAACACCTACAGCGGAACGGTTGGAGGACGAACCAAGA TGAAACAGTCGGAGACGTATCTCTATACGGAATTCAGCGGACGTGTCAAGAAGTTGAATTATACCGCCGGAATAGGTGTC TCCCGCTCATGGTTCAAGCAAGAAGGCGAGGAAGATTATCAATATTATACGTTCCGCCCAAAGGTATCCTTACAATATAA CTTTACGGATAATATGTATTTCCGGGTAAACGGTAGCGTAAATAATGTCTCACCTAGCCTATCGGAACTAAGCGCCATCG AGCAATATATCGATACGCTACAGATACGCCGGGGAAATCCTTATCTGAAACCCTATAAGAGTTATGACATGCAAGCCAAT TATCTATATAAAAAAGGAATATTCACCGGAGACTTAAACTTTTATTACAGTAATAGCCCGGACCAGATCATGGAGGAAGT GATACGAGAAAATAATAAGTTCATTCGCATTACCGATAACCAAAAAGGATGGCAGAAACTAAGCGGTGACTTGACATTAC GTGTCGGCCCTATCATCAAGCGGATCATAAGCCTATCCGTGACAGGTGGAGTCAATCGTTATATCAGCGAAGGAAATAGT TACTCGCATACCTATAACAATTGGTATTACCGGGCTTCCGTCATGGCTATGTACAAGAAATTCATGGCTATGTTCCAGAT ACAAAGTAGCTATAATACGTTTGTCGGCGAATTATTGCATGGCGGCGAGAATATCCATATGTTTATGTTCCGGTACAATC AAGGTAAATTCGCCGTTGGAGCCGGATTGATGATGCCTTTCTCCAGCCAGTACAAACGGGTAGAGGAAAATCGGAACGCT TACGCTCCCAGCCGTACGAACATGTACGCGAACGACTTCAGCCGAATGTTGATGCTAACCTTCTCTTGGAATTTTGACTT CGGCCGCAAGTTCAAGGAGGCCAATAAGAAACTTTGGAATAGTGACGAGGATTCGGGTATCATGCGATGA
Upstream 100 bases:
>100_bases TATCAACAATATCCAGAAGATCCGTCTGAACGGAGAAGAGATTTGGACTAGGTAACAATCACATACACACATTATTTCTT AATCATTAAATCGTACTATA
Downstream 100 bases:
>100_bases TCCTCAAATAAAAAAAGTCCGGTATTAATTACCGGACTTTTCTTTTCTATCTTCAGGAGGGGGAATTGGAACCCCTTCTT TAATAAACTCATCATATACG
Product: putative outer membrane receptor protein involved in Fe transport
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 769; Mature: 769
Protein sequence:
>769_residues MKQIIMAALLISFSWGIRAQQLQIRGKVIDLSDKSPLEFANITLQTADSAFITGTTTDSKGLFRIEKVKAGDYQVSVSSI GYKTSVVSVLGLSQPIDLGTISLASSSISLDEVTVNASAIRNTADRKITFPTSEQKAASSNGINLLNALMLPRLEVDPIR NSVSLPNEGTIQFCINGIKVELSDIRGLSPQEVIRVEYHDNPGLRYGNASVVLDYIVRRETSGGSVNLDLSNSPTTSFGD DQVSTKFNHKKSEFGLQYAVRYRNPYHIWTEGVETFRFESGETMERTSEGLPRGMSETAHNLSLNYNLVDNDHYYFNATL RYFLSDEDKGGGKNLYTNNNPEDKTYAWNPNSNSTKRPSLDLYYQRSLPHKQTLILNMVGTYIHTNANQMYQEWKNDILL SDILSNVDGDKYSIIGEGIYERQFEAGRLGGGLKHTQSWTDNTYSGTVGGRTKMKQSETYLYTEFSGRVKKLNYTAGIGV SRSWFKQEGEEDYQYYTFRPKVSLQYNFTDNMYFRVNGSVNNVSPSLSELSAIEQYIDTLQIRRGNPYLKPYKSYDMQAN YLYKKGIFTGDLNFYYSNSPDQIMEEVIRENNKFIRITDNQKGWQKLSGDLTLRVGPIIKRIISLSVTGGVNRYISEGNS YSHTYNNWYYRASVMAMYKKFMAMFQIQSSYNTFVGELLHGGENIHMFMFRYNQGKFAVGAGLMMPFSSQYKRVEENRNA YAPSRTNMYANDFSRMLMLTFSWNFDFGRKFKEANKKLWNSDEDSGIMR
Sequences:
>Translated_769_residues MKQIIMAALLISFSWGIRAQQLQIRGKVIDLSDKSPLEFANITLQTADSAFITGTTTDSKGLFRIEKVKAGDYQVSVSSI GYKTSVVSVLGLSQPIDLGTISLASSSISLDEVTVNASAIRNTADRKITFPTSEQKAASSNGINLLNALMLPRLEVDPIR NSVSLPNEGTIQFCINGIKVELSDIRGLSPQEVIRVEYHDNPGLRYGNASVVLDYIVRRETSGGSVNLDLSNSPTTSFGD DQVSTKFNHKKSEFGLQYAVRYRNPYHIWTEGVETFRFESGETMERTSEGLPRGMSETAHNLSLNYNLVDNDHYYFNATL RYFLSDEDKGGGKNLYTNNNPEDKTYAWNPNSNSTKRPSLDLYYQRSLPHKQTLILNMVGTYIHTNANQMYQEWKNDILL SDILSNVDGDKYSIIGEGIYERQFEAGRLGGGLKHTQSWTDNTYSGTVGGRTKMKQSETYLYTEFSGRVKKLNYTAGIGV SRSWFKQEGEEDYQYYTFRPKVSLQYNFTDNMYFRVNGSVNNVSPSLSELSAIEQYIDTLQIRRGNPYLKPYKSYDMQAN YLYKKGIFTGDLNFYYSNSPDQIMEEVIRENNKFIRITDNQKGWQKLSGDLTLRVGPIIKRIISLSVTGGVNRYISEGNS YSHTYNNWYYRASVMAMYKKFMAMFQIQSSYNTFVGELLHGGENIHMFMFRYNQGKFAVGAGLMMPFSSQYKRVEENRNA YAPSRTNMYANDFSRMLMLTFSWNFDFGRKFKEANKKLWNSDEDSGIMR >Mature_769_residues MKQIIMAALLISFSWGIRAQQLQIRGKVIDLSDKSPLEFANITLQTADSAFITGTTTDSKGLFRIEKVKAGDYQVSVSSI GYKTSVVSVLGLSQPIDLGTISLASSSISLDEVTVNASAIRNTADRKITFPTSEQKAASSNGINLLNALMLPRLEVDPIR NSVSLPNEGTIQFCINGIKVELSDIRGLSPQEVIRVEYHDNPGLRYGNASVVLDYIVRRETSGGSVNLDLSNSPTTSFGD DQVSTKFNHKKSEFGLQYAVRYRNPYHIWTEGVETFRFESGETMERTSEGLPRGMSETAHNLSLNYNLVDNDHYYFNATL RYFLSDEDKGGGKNLYTNNNPEDKTYAWNPNSNSTKRPSLDLYYQRSLPHKQTLILNMVGTYIHTNANQMYQEWKNDILL SDILSNVDGDKYSIIGEGIYERQFEAGRLGGGLKHTQSWTDNTYSGTVGGRTKMKQSETYLYTEFSGRVKKLNYTAGIGV SRSWFKQEGEEDYQYYTFRPKVSLQYNFTDNMYFRVNGSVNNVSPSLSELSAIEQYIDTLQIRRGNPYLKPYKSYDMQAN YLYKKGIFTGDLNFYYSNSPDQIMEEVIRENNKFIRITDNQKGWQKLSGDLTLRVGPIIKRIISLSVTGGVNRYISEGNS YSHTYNNWYYRASVMAMYKKFMAMFQIQSSYNTFVGELLHGGENIHMFMFRYNQGKFAVGAGLMMPFSSQYKRVEENRNA YAPSRTNMYANDFSRMLMLTFSWNFDFGRKFKEANKKLWNSDEDSGIMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87591; Mature: 87591
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIIMAALLISFSWGIRAQQLQIRGKVIDLSDKSPLEFANITLQTADSAFITGTTTDSK CHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCC GLFRIEKVKAGDYQVSVSSIGYKTSVVSVLGLSQPIDLGTISLASSSISLDEVTVNASAI CCEEEEEECCCCEEEEHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEHHHH RNTADRKITFPTSEQKAASSNGINLLNALMLPRLEVDPIRNSVSLPNEGTIQFCINGIKV HCCCCCEEECCCCHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEECEEE ELSDIRGLSPQEVIRVEYHDNPGLRYGNASVVLDYIVRRETSGGSVNLDLSNSPTTSFGD EEHHCCCCCHHHEEEEEECCCCCCEECCHHHHEEHHHHCCCCCCEEEEEECCCCCCCCCC DQVSTKFNHKKSEFGLQYAVRYRNPYHIWTEGVETFRFESGETMERTSEGLPRGMSETAH CCCCCCCCCCCHHCCEEEEEEECCCEEEECCCCEEEEECCCCHHHHHHCCCCCCHHHHHH NLSLNYNLVDNDHYYFNATLRYFLSDEDKGGGKNLYTNNNPEDKTYAWNPNSNSTKRPSL EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCE DLYYQRSLPHKQTLILNMVGTYIHTNANQMYQEWKNDILLSDILSNVDGDKYSIIGEGIY EEEEECCCCCHHHHHHEEHHHHEECCHHHHHHHHHHCEEHHHHHHCCCCCEEEEEECCHH ERQFEAGRLGGGLKHTQSWTDNTYSGTVGGRTKMKQSETYLYTEFSGRVKKLNYTAGIGV HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCC SRSWFKQEGEEDYQYYTFRPKVSLQYNFTDNMYFRVNGSVNNVSPSLSELSAIEQYIDTL CHHHHHCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH QIRRGNPYLKPYKSYDMQANYLYKKGIFTGDLNFYYSNSPDQIMEEVIRENNKFIRITDN EEECCCCCCCCCCCCCCCEEEEEECCEEEECEEEEECCCHHHHHHHHHHCCCCEEEEECC QKGWQKLSGDLTLRVGPIIKRIISLSVTGGVNRYISEGNSYSHTYNNWYYRASVMAMYKK CCCHHHHCCCEEEEHHHHHHHHHHEEECCCHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH FMAMFQIQSSYNTFVGELLHGGENIHMFMFRYNQGKFAVGAGLMMPFSSQYKRVEENRNA HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCEECCCCHHHHHHHHCCCC YAPSRTNMYANDFSRMLMLTFSWNFDFGRKFKEANKKLWNSDEDSGIMR CCCCCCCCCHHHHCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKQIIMAALLISFSWGIRAQQLQIRGKVIDLSDKSPLEFANITLQTADSAFITGTTTDSK CHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCC GLFRIEKVKAGDYQVSVSSIGYKTSVVSVLGLSQPIDLGTISLASSSISLDEVTVNASAI CCEEEEEECCCCEEEEHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEHHHH RNTADRKITFPTSEQKAASSNGINLLNALMLPRLEVDPIRNSVSLPNEGTIQFCINGIKV HCCCCCEEECCCCHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEECEEE ELSDIRGLSPQEVIRVEYHDNPGLRYGNASVVLDYIVRRETSGGSVNLDLSNSPTTSFGD EEHHCCCCCHHHEEEEEECCCCCCEECCHHHHEEHHHHCCCCCCEEEEEECCCCCCCCCC DQVSTKFNHKKSEFGLQYAVRYRNPYHIWTEGVETFRFESGETMERTSEGLPRGMSETAH CCCCCCCCCCCHHCCEEEEEEECCCEEEECCCCEEEEECCCCHHHHHHCCCCCCHHHHHH NLSLNYNLVDNDHYYFNATLRYFLSDEDKGGGKNLYTNNNPEDKTYAWNPNSNSTKRPSL EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCE DLYYQRSLPHKQTLILNMVGTYIHTNANQMYQEWKNDILLSDILSNVDGDKYSIIGEGIY EEEEECCCCCHHHHHHEEHHHHEECCHHHHHHHHHHCEEHHHHHHCCCCCEEEEEECCHH ERQFEAGRLGGGLKHTQSWTDNTYSGTVGGRTKMKQSETYLYTEFSGRVKKLNYTAGIGV HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCC SRSWFKQEGEEDYQYYTFRPKVSLQYNFTDNMYFRVNGSVNNVSPSLSELSAIEQYIDTL CHHHHHCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH QIRRGNPYLKPYKSYDMQANYLYKKGIFTGDLNFYYSNSPDQIMEEVIRENNKFIRITDN EEECCCCCCCCCCCCCCCEEEEEECCEEEECEEEEECCCHHHHHHHHHHCCCCEEEEECC QKGWQKLSGDLTLRVGPIIKRIISLSVTGGVNRYISEGNSYSHTYNNWYYRASVMAMYKK CCCHHHHCCCEEEEHHHHHHHHHHEEECCCHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH FMAMFQIQSSYNTFVGELLHGGENIHMFMFRYNQGKFAVGAGLMMPFSSQYKRVEENRNA HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCEECCCCHHHHHHHHCCCC YAPSRTNMYANDFSRMLMLTFSWNFDFGRKFKEANKKLWNSDEDSGIMR CCCCCCCCCHHHHCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA