| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yhcG [H]
Identifier: 150007743
GI number: 150007743
Start: 1277745
End: 1278572
Strand: Direct
Name: yhcG [H]
Synonym: BDI_1101
Alternate gene names: 150007743
Gene position: 1277745-1278572 (Clockwise)
Preceding gene: 150007740
Following gene: 150007744
Centisome position: 26.56
GC content: 46.74
Gene sequence:
>828_bases ATGATTACATTAAAAGAACTCTCATTCAGCTATAGCCGCAAAAAAGAGGTACTTGATCGTATCAATCTTGAGGTTGGATC GGGACACATCTGTGGCTTATTGGGAAAGAACGGTGAAGGAAAGACTACGCTTCTAAACCTTCTAAGCGGACAGATCTTTC CGGATCAAGGTTCTTGCCTCGCATTGGAAGAAATTCCTTCCGAGAGAAACGCTCGTTTCTTGCAGCAGATCTTCTTATTG CCGGAGGAAATCTCCATGCCTGAGGTCACCGCCATAGAATATATAAAGATGTACGCGCCTTTTTATCCGACATTTAGGGA CGATATCTGCAAGGCTTGCGTAGAATCGTTTGAGATCAATCTATCCGATCGCCTGTCGAAAATGTCTCAAGGACAACGGA AAAAGGTGGCGATAACCTTGGCGCTGGCCGCTCATACGCCCCTGCTTCTAATGGATGAACCAACAAATGGGCTGGACATT CCCTCGAAAGCGACATTCCGCAGACTGGTAGCCTCTTTGATAGATGACAATCAGACGGTTATTATCTCCACGCATCAGGT CAGGGATCTGGAAAGCTTGATCGACACGGTATTGATCTTAGACCAAAGGCAAATCCTATTGAATAAGACGTTGAACGAGA TCGGCGAGAAACTTTATTTCGGACCACTCCTGCCGGAAGAGAAAGCTCTTTATTCCGAGCCTACCCCGCAAGGGACAATA GGCGTCACCGCAAGGGATGGCAAGGAAGAGACGGCCGTATCCTTAGAGTTGCTCTTTAACGCGGCGATAACGTATCCCAA AGAGATCCAAAGAATCATGAACTCCTAA
Upstream 100 bases:
>100_bases AAAATAAAAGGAAAAAAACACCCTTCCCTCTTGTTTATTCAAAAACTTCCACTACATTTGCAGTGTACTATTAAACTAAT ACACTAAAGCAGCAAAACAT
Downstream 100 bases:
>100_bases ATACACATAGACATGAAAACAGATTTTAGTATACAACGCATCAATCTTTTACTTCGCAAAGATTGGATAGAGAATAAGAA GAAATTAGCTTATGGGGTGT
Product: ABC transporter ATP-binding protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MITLKELSFSYSRKKEVLDRINLEVGSGHICGLLGKNGEGKTTLLNLLSGQIFPDQGSCLALEEIPSERNARFLQQIFLL PEEISMPEVTAIEYIKMYAPFYPTFRDDICKACVESFEINLSDRLSKMSQGQRKKVAITLALAAHTPLLLMDEPTNGLDI PSKATFRRLVASLIDDNQTVIISTHQVRDLESLIDTVLILDQRQILLNKTLNEIGEKLYFGPLLPEEKALYSEPTPQGTI GVTARDGKEETAVSLELLFNAAITYPKEIQRIMNS
Sequences:
>Translated_275_residues MITLKELSFSYSRKKEVLDRINLEVGSGHICGLLGKNGEGKTTLLNLLSGQIFPDQGSCLALEEIPSERNARFLQQIFLL PEEISMPEVTAIEYIKMYAPFYPTFRDDICKACVESFEINLSDRLSKMSQGQRKKVAITLALAAHTPLLLMDEPTNGLDI PSKATFRRLVASLIDDNQTVIISTHQVRDLESLIDTVLILDQRQILLNKTLNEIGEKLYFGPLLPEEKALYSEPTPQGTI GVTARDGKEETAVSLELLFNAAITYPKEIQRIMNS >Mature_275_residues MITLKELSFSYSRKKEVLDRINLEVGSGHICGLLGKNGEGKTTLLNLLSGQIFPDQGSCLALEEIPSERNARFLQQIFLL PEEISMPEVTAIEYIKMYAPFYPTFRDDICKACVESFEINLSDRLSKMSQGQRKKVAITLALAAHTPLLLMDEPTNGLDI PSKATFRRLVASLIDDNQTVIISTHQVRDLESLIDTVLILDQRQILLNKTLNEIGEKLYFGPLLPEEKALYSEPTPQGTI GVTARDGKEETAVSLELLFNAAITYPKEIQRIMNS
Specific function: Part Of The Binding-Protein-Dependent Transport System For Citrate-Dependent Iron(III). Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=195, Percent_Identity=27.1794871794872, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI30795238, Length=195, Percent_Identity=27.1794871794872, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI46592956, Length=222, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI46592964, Length=222, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI46592971, Length=222, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI46592915, Length=222, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI46592978, Length=222, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27436953, Length=203, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI46592898, Length=222, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=27.6995305164319, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI215820660, Length=204, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI20143975, Length=204, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI45446740, Length=210, Percent_Identity=24.7619047619048, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI47078218, Length=210, Percent_Identity=24.7619047619048, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI105990541, Length=225, Percent_Identity=24.8888888888889, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI21536376, Length=200, Percent_Identity=27, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27262624, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI27262626, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI153792144, Length=220, Percent_Identity=24.5454545454545, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI42741659, Length=195, Percent_Identity=29.2307692307692, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI27477115, Length=203, Percent_Identity=23.6453201970443, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI6005701, Length=199, Percent_Identity=23.6180904522613, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI255708477, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=30.1801801801802, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1790739, Length=241, Percent_Identity=26.1410788381743, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787112, Length=223, Percent_Identity=28.6995515695067, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786319, Length=225, Percent_Identity=25.3333333333333, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=29.3532338308458, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87081782, Length=213, Percent_Identity=24.8826291079812, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786803, Length=180, Percent_Identity=28.8888888888889, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI48994997, Length=223, Percent_Identity=27.3542600896861, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI48994943, Length=212, Percent_Identity=25.9433962264151, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787758, Length=226, Percent_Identity=25.2212389380531, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=26.1261261261261, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788165, Length=206, Percent_Identity=26.6990291262136, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=25.5411255411255, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787143, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786345, Length=231, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786563, Length=195, Percent_Identity=30.2564102564103, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789891, Length=244, Percent_Identity=27.4590163934426, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788450, Length=218, Percent_Identity=26.1467889908257, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789751, Length=207, Percent_Identity=25.6038647342995, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=28.0788177339901, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87081834, Length=173, Percent_Identity=28.3236994219653, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533608, Length=217, Percent_Identity=25.8064516129032, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71983516, Length=217, Percent_Identity=29.4930875576037, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71983510, Length=217, Percent_Identity=29.4930875576037, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983523, Length=217, Percent_Identity=29.4930875576037, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558664, Length=249, Percent_Identity=26.5060240963855, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193202349, Length=234, Percent_Identity=27.3504273504274, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17533971, Length=206, Percent_Identity=25.2427184466019, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565586, Length=209, Percent_Identity=24.4019138755981, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569143, Length=235, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71992290, Length=280, Percent_Identity=22.1428571428571, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71984940, Length=212, Percent_Identity=28.7735849056604, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17510237, Length=230, Percent_Identity=23.0434782608696, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=207, Percent_Identity=29.4685990338164, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324498, Length=306, Percent_Identity=24.5098039215686, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=28.169014084507, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=28.169014084507, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI221500365, Length=213, Percent_Identity=27.6995305164319, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI116007184, Length=215, Percent_Identity=26.9767441860465, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24650853, Length=201, Percent_Identity=32.3383084577114, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24650855, Length=201, Percent_Identity=32.3383084577114, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI281362751, Length=201, Percent_Identity=32.3383084577114, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=27.2300469483568, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI19920532, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580930, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24582014, Length=187, Percent_Identity=31.0160427807487, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24582012, Length=187, Percent_Identity=31.0160427807487, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574744, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641565, Length=243, Percent_Identity=24.6913580246914, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85724858, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85724856, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580547, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580551, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580549, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580545, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85725262, Length=185, Percent_Identity=30.2702702702703, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161076682, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI161076684, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24581617, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24581615, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 30759; Mature: 30759
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLKELSFSYSRKKEVLDRINLEVGSGHICGLLGKNGEGKTTLLNLLSGQIFPDQGSCL CEEHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEE ALEEIPSERNARFLQQIFLLPEEISMPEVTAIEYIKMYAPFYPTFRDDICKACVESFEIN EHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LSDRLSKMSQGQRKKVAITLALAAHTPLLLMDEPTNGLDIPSKATFRRLVASLIDDNQTV HHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEE IISTHQVRDLESLIDTVLILDQRQILLNKTLNEIGEKLYFGPLLPEEKALYSEPTPQGTI EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEE GVTARDGKEETAVSLELLFNAAITYPKEIQRIMNS EEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MITLKELSFSYSRKKEVLDRINLEVGSGHICGLLGKNGEGKTTLLNLLSGQIFPDQGSCL CEEHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEE ALEEIPSERNARFLQQIFLLPEEISMPEVTAIEYIKMYAPFYPTFRDDICKACVESFEIN EHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LSDRLSKMSQGQRKKVAITLALAAHTPLLLMDEPTNGLDIPSKATFRRLVASLIDDNQTV HHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEE IISTHQVRDLESLIDTVLILDQRQILLNKTLNEIGEKLYFGPLLPEEKALYSEPTPQGTI EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEE GVTARDGKEETAVSLELLFNAAITYPKEIQRIMNS EEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]