| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is pepP [H]
Identifier: 150007740
GI number: 150007740
Start: 1274194
End: 1275567
Strand: Direct
Name: pepP [H]
Synonym: BDI_1098
Alternate gene names: 150007740
Gene position: 1274194-1275567 (Clockwise)
Preceding gene: 150007733
Following gene: 150007743
Centisome position: 26.48
GC content: 48.11
Gene sequence:
>1374_bases ATGTTCAGTAAAGAAACTTATATGGCCCGCCGGGCTAAGCTGAAACAAACCATAGGTTCCGGTTTGTTGCTATTCCTTGG AAACGACGAGAGTGGGATGAACTACGCCGATAATACGTATCACTTCCGTCAAGACTCTACCTTCTTGTATTTCTTCGGAT TGCCATACGCCGGGTTATCCGCTATCATCGATATCGATAACGATAAGGAGATCATCTTTGGCGATGAGTTGACTATAGAC GCGATTGTATGGATGGGTACGCAGCCCACCCTAAAAGAGAAGAGCGAGGCCGCAGGTATCAAGGAAGTCCGTCCTTTTAA GGAGATCGAGACTTATTTGAAGAATGCCCAGCAAAAAGGCCAGCCAATCCATTATCTGCCGACGTATCGTGCGGAACACC AGATCAAGTTATTCCAATGGTTGGGTATCGTACCCGGTGCGGAGAAACCTTCCGTGCCTTTTATCATGGGTGTCGTAAAC CAACGGAATTACAAGAGCGAGGAAGAAATTGCCGAGATCGAGAAAGCCTGTATCGTAACCGCCGATATGCACCTGACTGC CATGCGTACCGTACGTCCGGGAATCCGGGAGTCGGATGTAGCGGCTGCCGTTGCGGAAGTCGCTTTCGCCAACAATTACC AGCTCTCCTTCCCTATCATCGCCACGATCAATGGGCAGACCTTGCACAACCATGATCATAGTCATATGATTAAGAGCGGT GATATGCTATTATTGGACGCCGGTGCCGAGACTGAGATGGGATATGCCGGAGATATGTCGTCCACCATCCCAGCCGACTC TAAGTTCACGACCCGTCAAAAAGACATCTATGATATTCAAGTAGCCGCCCATGAAGCTGCCGTAGCGGCTTTGCGCCCGG GTATTCCTTTCGTGGATGTATATGAGTTGTCTTGTAAAGTGATCATGGAGGGCTTAAAGGACCTTGGTTTCGTGAAAGGA GATCCGATGGAAGCCGTAAAAGCCGGTGCTCACGCCATGTTTATGCCTTGTGGCTTAGGCCATATGATGGGATTGGATGT ACATGATATGGAGAATCTGGGAGAGGTATACGTTGGTTATGACGGACAGCCGAAGAGTACGGAATTCGGACGTAAGTCAT TGCGCTTGGGACGTAAGCTGGAACCGGGTTTTGTCTTGACCATCGAGCCGGGTGTATACTTCATCCCTGAATTAATGGAT TTATGGAGAGGCCAGAACAAGTTCACCGAATTCATCAATTACGAGAAGTTGTTTACATATAAAGATTTCAGTGGCATACG TAACGAGGAAGACTATCTGATTACCGAGAACGGCGCTCGTCTATTAGGAAAGAAGATCCCTTTGCGTACGGAAGAAGTAG AAGCAATTCGATAA
Upstream 100 bases:
>100_bases GTTACATTTTACATGGGCTAATGTAAGAAATAATTTCGAATGTCGGCCTAGTATATTACATTAATTACTATCTTTGGTAC ACTAACAAAAAATAATCCTT
Downstream 100 bases:
>100_bases ATCCTATACATTATTATATATAAGCTTATGCAAAAGGGAGAGCCTTAAAAACAGCTCTCCCTTTTTGGGCTAAACGAGAA AGACAATGTATGAAACGATT
Product: Xaa-Pro aminopeptidase
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MFSKETYMARRAKLKQTIGSGLLLFLGNDESGMNYADNTYHFRQDSTFLYFFGLPYAGLSAIIDIDNDKEIIFGDELTID AIVWMGTQPTLKEKSEAAGIKEVRPFKEIETYLKNAQQKGQPIHYLPTYRAEHQIKLFQWLGIVPGAEKPSVPFIMGVVN QRNYKSEEEIAEIEKACIVTADMHLTAMRTVRPGIRESDVAAAVAEVAFANNYQLSFPIIATINGQTLHNHDHSHMIKSG DMLLLDAGAETEMGYAGDMSSTIPADSKFTTRQKDIYDIQVAAHEAAVAALRPGIPFVDVYELSCKVIMEGLKDLGFVKG DPMEAVKAGAHAMFMPCGLGHMMGLDVHDMENLGEVYVGYDGQPKSTEFGRKSLRLGRKLEPGFVLTIEPGVYFIPELMD LWRGQNKFTEFINYEKLFTYKDFSGIRNEEDYLITENGARLLGKKIPLRTEEVEAIR
Sequences:
>Translated_457_residues MFSKETYMARRAKLKQTIGSGLLLFLGNDESGMNYADNTYHFRQDSTFLYFFGLPYAGLSAIIDIDNDKEIIFGDELTID AIVWMGTQPTLKEKSEAAGIKEVRPFKEIETYLKNAQQKGQPIHYLPTYRAEHQIKLFQWLGIVPGAEKPSVPFIMGVVN QRNYKSEEEIAEIEKACIVTADMHLTAMRTVRPGIRESDVAAAVAEVAFANNYQLSFPIIATINGQTLHNHDHSHMIKSG DMLLLDAGAETEMGYAGDMSSTIPADSKFTTRQKDIYDIQVAAHEAAVAALRPGIPFVDVYELSCKVIMEGLKDLGFVKG DPMEAVKAGAHAMFMPCGLGHMMGLDVHDMENLGEVYVGYDGQPKSTEFGRKSLRLGRKLEPGFVLTIEPGVYFIPELMD LWRGQNKFTEFINYEKLFTYKDFSGIRNEEDYLITENGARLLGKKIPLRTEEVEAIR >Mature_457_residues MFSKETYMARRAKLKQTIGSGLLLFLGNDESGMNYADNTYHFRQDSTFLYFFGLPYAGLSAIIDIDNDKEIIFGDELTID AIVWMGTQPTLKEKSEAAGIKEVRPFKEIETYLKNAQQKGQPIHYLPTYRAEHQIKLFQWLGIVPGAEKPSVPFIMGVVN QRNYKSEEEIAEIEKACIVTADMHLTAMRTVRPGIRESDVAAAVAEVAFANNYQLSFPIIATINGQTLHNHDHSHMIKSG DMLLLDAGAETEMGYAGDMSSTIPADSKFTTRQKDIYDIQVAAHEAAVAALRPGIPFVDVYELSCKVIMEGLKDLGFVKG DPMEAVKAGAHAMFMPCGLGHMMGLDVHDMENLGEVYVGYDGQPKSTEFGRKSLRLGRKLEPGFVLTIEPGVYFIPELMD LWRGQNKFTEFINYEKLFTYKDFSGIRNEEDYLITENGARLLGKKIPLRTEEVEAIR
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI149589008, Length=464, Percent_Identity=28.8793103448276, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI260593663, Length=459, Percent_Identity=28.322440087146, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI260593665, Length=308, Percent_Identity=32.1428571428571, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI11559925, Length=489, Percent_Identity=24.7443762781186, Blast_Score=113, Evalue=3e-25, Organism=Escherichia coli, GI1789275, Length=474, Percent_Identity=30.8016877637131, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1790282, Length=300, Percent_Identity=30.6666666666667, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1788728, Length=240, Percent_Identity=25.4166666666667, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508215, Length=473, Percent_Identity=30.6553911205074, Blast_Score=180, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321118, Length=442, Percent_Identity=26.0180995475113, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320922, Length=223, Percent_Identity=27.8026905829596, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357079, Length=459, Percent_Identity=32.4618736383442, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI19920384, Length=458, Percent_Identity=25.1091703056769, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 51260; Mature: 51260
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKETYMARRAKLKQTIGSGLLLFLGNDESGMNYADNTYHFRQDSTFLYFFGLPYAGLS CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCE AIIDIDNDKEIIFGDELTIDAIVWMGTQPTLKEKSEAAGIKEVRPFKEIETYLKNAQQKG EEEECCCCCEEEECCCEEEEEEEEECCCCCHHHHHHHCCCHHCCCHHHHHHHHHHHHHCC QPIHYLPTYRAEHQIKLFQWLGIVPGAEKPSVPFIMGVVNQRNYKSEEEIAEIEKACIVT CCEEECCCCCCCCCEEEEHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEE ADMHLTAMRTVRPGIRESDVAAAVAEVAFANNYQLSFPIIATINGQTLHNHDHSHMIKSG ECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEECCCCHHHCCCC DMLLLDAGAETEMGYAGDMSSTIPADSKFTTRQKDIYDIQVAAHEAAVAALRPGIPFVDV CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCEEEH YELSCKVIMEGLKDLGFVKGDPMEAVKAGAHAMFMPCGLGHMMGLDVHDMENLGEVYVGY HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCHHHCCCCHHHHHCCCCEEECC DGQPKSTEFGRKSLRLGRKLEPGFVLTIEPGVYFIPELMDLWRGQNKFTEFINYEKLFTY CCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHCCCHHHHHHHCHHHEEEE KDFSGIRNEEDYLITENGARLLGKKIPLRTEEVEAIR CCCCCCCCCCCEEEECCCHHHHHCCCCCCCHHHHHCC >Mature Secondary Structure MFSKETYMARRAKLKQTIGSGLLLFLGNDESGMNYADNTYHFRQDSTFLYFFGLPYAGLS CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCE AIIDIDNDKEIIFGDELTIDAIVWMGTQPTLKEKSEAAGIKEVRPFKEIETYLKNAQQKG EEEECCCCCEEEECCCEEEEEEEEECCCCCHHHHHHHCCCHHCCCHHHHHHHHHHHHHCC QPIHYLPTYRAEHQIKLFQWLGIVPGAEKPSVPFIMGVVNQRNYKSEEEIAEIEKACIVT CCEEECCCCCCCCCEEEEHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEEE ADMHLTAMRTVRPGIRESDVAAAVAEVAFANNYQLSFPIIATINGQTLHNHDHSHMIKSG ECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEECCCCHHHCCCC DMLLLDAGAETEMGYAGDMSSTIPADSKFTTRQKDIYDIQVAAHEAAVAALRPGIPFVDV CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCEEEH YELSCKVIMEGLKDLGFVKGDPMEAVKAGAHAMFMPCGLGHMMGLDVHDMENLGEVYVGY HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCHHHCCCCHHHHHCCCCEEECC DGQPKSTEFGRKSLRLGRKLEPGFVLTIEPGVYFIPELMDLWRGQNKFTEFINYEKLFTY CCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHCCCHHHHHHHCHHHEEEE KDFSGIRNEEDYLITENGARLLGKKIPLRTEEVEAIR CCCCCCCCCCCEEEECCCHHHHHCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]