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The map label for this gene is rlpA [C]

Identifier: 150007694

GI number: 150007694

Start: 1215435

End: 1215914

Strand: Direct

Name: rlpA [C]

Synonym: BDI_1049

Alternate gene names: 150007694

Gene position: 1215435-1215914 (Clockwise)

Preceding gene: 150007693

Following gene: 150007695

Centisome position: 25.26

GC content: 42.29

Gene sequence:

>480_bases
TTGATTAAAAAAAGGTACATGTCCTTCCGCTTGTTCTACATATTACTTATATTTGCCGCAGTTAAGTGTGGAGAAGGAAT
ATGGGCACAGGAGGAAGGACTTGCTTCGTATTACCATCATCGTTTCCACGGCAGGAAATCATCCAGTGGAAGGGTTCATG
ATAAAGAAGAATTAGTCGCCGCGCATCGTACGTATCCTTTTGGTACTTTTTTAAGAGTCACGAACTTGGAGAATATGAAA
AGTACCATTGTATGCGTAACGGATCGTGGACCTCGTTATAGAAAACGAATCATTGATGTATCAGCGAGCGCCGCCGAGAT
ATTGGATTTTATCGATAAAGGTGTCGCTAAGGTACGGATAGAAGTCGTTCCCGGCCCCTTAGACCTCCGCTATCTGGACT
TGATCTATCCTAAGATTCCTTATCTGGATATAGATTATTTACGTCCGGATCCACCTTATAGGGTGAAATTCACGAAATAA

Upstream 100 bases:

>100_bases
GTTCCAGATCGGAAAGGAGATCAATGATGTAGAAGTTGAAAAAATCGTTGTTTTTCTAAGGACTTTGAACGGAGAATATA
ATGGAAAAATGCTTCAATAA

Downstream 100 bases:

>100_bases
ATTTAATATAATGAAGCAAATACTTATCACCGGGGGCGCCGGCTTTATCGGTTCTCATTTATGTGCCCGTCTTTTAGAAG
AAGGAAATGAAGTAATTTGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIKKRYMSFRLFYILLIFAAVKCGEGIWAQEEGLASYYHHRFHGRKSSSGRVHDKEELVAAHRTYPFGTFLRVTNLENMK
STIVCVTDRGPRYRKRIIDVSASAAEILDFIDKGVAKVRIEVVPGPLDLRYLDLIYPKIPYLDIDYLRPDPPYRVKFTK

Sequences:

>Translated_159_residues
MIKKRYMSFRLFYILLIFAAVKCGEGIWAQEEGLASYYHHRFHGRKSSSGRVHDKEELVAAHRTYPFGTFLRVTNLENMK
STIVCVTDRGPRYRKRIIDVSASAAEILDFIDKGVAKVRIEVVPGPLDLRYLDLIYPKIPYLDIDYLRPDPPYRVKFTK
>Mature_159_residues
MIKKRYMSFRLFYILLIFAAVKCGEGIWAQEEGLASYYHHRFHGRKSSSGRVHDKEELVAAHRTYPFGTFLRVTNLENMK
STIVCVTDRGPRYRKRIIDVSASAAEILDFIDKGVAKVRIEVVPGPLDLRYLDLIYPKIPYLDIDYLRPDPPYRVKFTK

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 18530; Mature: 18530

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKRYMSFRLFYILLIFAAVKCGEGIWAQEEGLASYYHHRFHGRKSSSGRVHDKEELVA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AHRTYPFGTFLRVTNLENMKSTIVCVTDRGPRYRKRIIDVSASAAEILDFIDKGVAKVRI
HHCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
EVVPGPLDLRYLDLIYPKIPYLDIDYLRPDPPYRVKFTK
EEECCCCCHHHHHHHCCCCCCEEEECCCCCCCEEEEECC
>Mature Secondary Structure
MIKKRYMSFRLFYILLIFAAVKCGEGIWAQEEGLASYYHHRFHGRKSSSGRVHDKEELVA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AHRTYPFGTFLRVTNLENMKSTIVCVTDRGPRYRKRIIDVSASAAEILDFIDKGVAKVRI
HHCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
EVVPGPLDLRYLDLIYPKIPYLDIDYLRPDPPYRVKFTK
EEECCCCCHHHHHHHCCCCCCEEEECCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]