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The map label for this gene is araC [C]

Identifier: 150007665

GI number: 150007665

Start: 1180492

End: 1181394

Strand: Direct

Name: araC [C]

Synonym: BDI_1020

Alternate gene names: 150007665

Gene position: 1180492-1181394 (Clockwise)

Preceding gene: 150007664

Following gene: 150007668

Centisome position: 24.54

GC content: 44.41

Gene sequence:

>903_bases
ATGAATGAGATAAAGAGAATAGACACTGTGCAGCAATACAACGATTATTTCGGTATGGAAACGTTGCATCCGCTGGTTAC
GGTCATCGATGCGCGAGAGGCTAATCCGGTACATTTCTGTCCGAAACTCTATAATTTGTATGCTATCTTGATGAAAGACC
CGGACTGTGGTACTCTCAAATATGGTCGTAGCATCTATGACTATCAGCAAGGCACGATGCTTTTTCTCGCTCCGGGGCAG
GTCATGGGGTCTGACGATGACGGTCAGTTGCATCAACCCGGTGGATGGCTGCTCGCTTTTCATCCCGAACTGGTACGTAA
CACTCCGTTAGCCCAATTCATCAAAAACTATAGTTTCTTCTCCTATTCCGCCAATGAAGCACTCCACTTGTCTGAACAGG
AAAGGCGAACCATTATTGACTGCATGTGCAAAATCAGAGAAGAATTGCTCCATCCCATAGACAAGCATACGAAATCACTG
ATTACAGACAATATAAAACTCCTACTTGATTATTGTGAGCGGTTCTATGACCGTCAATTCGAAACGCGGGAGAATGTGAA
TCTTGACATCTTAGCCCGATTTGAGCAAACGCTGGATGATTATCTTGCGTCCAATCTTCCCATAAGTAAAGGTACGCCCA
CCGTGCAGTATTGTGCCGACAAGCTTTGCCTGTCGGCTAACTATCTAAGCGACCTTCTGAAAAAGGAAACCGGTGTTTCT
GCGTTGAAACATATCCAGCAGAAGATGCTCGATATAGCGAAAGAGCGTGTATTCGATGTCACCAAATCCATCAGCGAGAT
ATCCTACGAATTGGGATTTCCATATCCGCAACATTTCAGCCGTTGGTTCAAGAAAATGGTTGGGGTTACACCTAATGAAT
ATAGACAAAATCGAAACAATTAG

Upstream 100 bases:

>100_bases
CTGTATCAATTCCACAGATATAATAACCAATTTCATCGGACGGTGAGAAACGTATGAAAGAAAAGGTTATCTTTGCAATC
GAAGCCAAATACAATTGAAG

Downstream 100 bases:

>100_bases
ACATTTAAACCACGGATCGTAATATTGCGATCACGGTTTAGTCAATCATAAAGGCACGGACATAACGGCAAGATGTCTGC
GCCTTCGTATTTCCTAGTCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator AraC Type; Transcriptional Regulatory Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNEIKRIDTVQQYNDYFGMETLHPLVTVIDAREANPVHFCPKLYNLYAILMKDPDCGTLKYGRSIYDYQQGTMLFLAPGQ
VMGSDDDGQLHQPGGWLLAFHPELVRNTPLAQFIKNYSFFSYSANEALHLSEQERRTIIDCMCKIREELLHPIDKHTKSL
ITDNIKLLLDYCERFYDRQFETRENVNLDILARFEQTLDDYLASNLPISKGTPTVQYCADKLCLSANYLSDLLKKETGVS
ALKHIQQKMLDIAKERVFDVTKSISEISYELGFPYPQHFSRWFKKMVGVTPNEYRQNRNN

Sequences:

>Translated_300_residues
MNEIKRIDTVQQYNDYFGMETLHPLVTVIDAREANPVHFCPKLYNLYAILMKDPDCGTLKYGRSIYDYQQGTMLFLAPGQ
VMGSDDDGQLHQPGGWLLAFHPELVRNTPLAQFIKNYSFFSYSANEALHLSEQERRTIIDCMCKIREELLHPIDKHTKSL
ITDNIKLLLDYCERFYDRQFETRENVNLDILARFEQTLDDYLASNLPISKGTPTVQYCADKLCLSANYLSDLLKKETGVS
ALKHIQQKMLDIAKERVFDVTKSISEISYELGFPYPQHFSRWFKKMVGVTPNEYRQNRNN
>Mature_300_residues
MNEIKRIDTVQQYNDYFGMETLHPLVTVIDAREANPVHFCPKLYNLYAILMKDPDCGTLKYGRSIYDYQQGTMLFLAPGQ
VMGSDDDGQLHQPGGWLLAFHPELVRNTPLAQFIKNYSFFSYSANEALHLSEQERRTIIDCMCKIREELLHPIDKHTKSL
ITDNIKLLLDYCERFYDRQFETRENVNLDILARFEQTLDDYLASNLPISKGTPTVQYCADKLCLSANYLSDLLKKETGVS
ALKHIQQKMLDIAKERVFDVTKSISEISYELGFPYPQHFSRWFKKMVGVTPNEYRQNRNN

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34906; Mature: 34906

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIKRIDTVQQYNDYFGMETLHPLVTVIDAREANPVHFCPKLYNLYAILMKDPDCGTLK
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCCHH
YGRSIYDYQQGTMLFLAPGQVMGSDDDGQLHQPGGWLLAFHPELVRNTPLAQFIKNYSFF
HCCHHHHHCCCCEEEEECCCEECCCCCCCEECCCCEEEEECHHHHHCCCHHHHHHCCCCE
SYSANEALHLSEQERRTIIDCMCKIREELLHPIDKHTKSLITDNIKLLLDYCERFYDRQF
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETRENVNLDILARFEQTLDDYLASNLPISKGTPTVQYCADKLCLSANYLSDLLKKETGVS
CHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKHIQQKMLDIAKERVFDVTKSISEISYELGFPYPQHFSRWFKKMVGVTPNEYRQNRNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCCC
>Mature Secondary Structure
MNEIKRIDTVQQYNDYFGMETLHPLVTVIDAREANPVHFCPKLYNLYAILMKDPDCGTLK
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCCHH
YGRSIYDYQQGTMLFLAPGQVMGSDDDGQLHQPGGWLLAFHPELVRNTPLAQFIKNYSFF
HCCHHHHHCCCCEEEEECCCEECCCCCCCEECCCCEEEEECHHHHHCCCHHHHHHCCCCE
SYSANEALHLSEQERRTIIDCMCKIREELLHPIDKHTKSLITDNIKLLLDYCERFYDRQF
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETRENVNLDILARFEQTLDDYLASNLPISKGTPTVQYCADKLCLSANYLSDLLKKETGVS
CHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKHIQQKMLDIAKERVFDVTKSISEISYELGFPYPQHFSRWFKKMVGVTPNEYRQNRNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA