| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is btuC [H]
Identifier: 150007663
GI number: 150007663
Start: 1177951
End: 1179015
Strand: Direct
Name: btuC [H]
Synonym: BDI_1018
Alternate gene names: 150007663
Gene position: 1177951-1179015 (Clockwise)
Preceding gene: 150007662
Following gene: 150007664
Centisome position: 24.48
GC content: 47.14
Gene sequence:
>1065_bases ATGAGACATTCAAATACCCTATGGATGCTGGCGATTGTCACGGCTATTTTTGTTCTAATCTTTTTGAATTTGGTGTTGGG GTCAGTCTCTATTCCTCTTCAATCGGTTTGGCATATTATCTGGAATTTAGGAAATGAGCCTATTACATGGCAGAATATTA TCTGGAAATCCCGACTACCACAGGCATTGACAGCGTTGGTAGCGGGAGCTGGCTTATCCATCAGCGGCTTACAGATGCAA ACCGTTTTCCGTAATCCATTGGCCGGACCTTCGGTCTTAGGTATCAGTTCGGGAGCGAGCATGGGTGTCGCTTTCGTGGT GTTGTTAAGCGGTAGTTTAGGGGGCGTTGCCTTGAGTAAACTTGGTTTTATGGGGGAGATCGCCTTATCGATAGCGGCCG TGATCGGTTCCTTATCCGTGATGGCGCTGATCGTGTATGTTTCCCAAAAGGTAAAAGGAAATGTCACGTTGTTGATTATC GGTGTGATGATCGGTTACGTGGCAAACGCCGTGATCGGTGTACTTAAATTCTTTAGCGTCGAGGAGGATATCCGTGCATA CGTGATTTGGGGATTGGGTAGTTTCGCCCGTGTTTCCGGTAATCAGATGACGTTGTTCGTGATTCTTATGACAATCTTGA TCCCTCTCTCGTTCCTGCTTATCAAGACCATGAACTTGATGCTTCTTGGGGATAGCTACGCACGCAATTTGGGACTTAAT ATCAAGCGGGCCCGTTTGTTGGTTATCACCTCGGCTGGGGTCCTTACGGCGATTGTCACTGCTTATTGCGGACCTATTAT CTTCTTGGGGCTAGCCGTTCCGCATTTATGCCGGGCCATATTTCAAACTTCCGACCATCGGATTTTAATGCCTGCGGTCT TATTCGCCGGTGCGGCGTTGGCGTTGATCTGTAATTTGATCGCCCGTATGCCGGGGTTCGAGGGAGCGTTACCTGTCAAC TCGGTAACCGCTTTAGTAGGTGCTCCAGTAGTGGCCTCAGTATTATTTAGAAAACGTAAGAATGAATTGAACGAGCAAGA TGAAACAAGATACGATTCATATTAA
Upstream 100 bases:
>100_bases ACCGGAGATCGTCCTAGCGGATTTGCTTCATATCTTTCATCCGGATTTATTACCGGATCATGAGTCGGTCTATTATTCTC GACTTAAATAAGGAACACTG
Downstream 100 bases:
>100_bases CGGACTTTCGATCGGTTACCATTCTAAGAGTAGTACAAAGCTGGTAGCTAAAGGTATACACTCTACGATCTATAGTGGTG AATTAACCTGTTTGCTGGGT
Product: iron(III) ABC transporter permease
Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRHSNTLWMLAIVTAIFVLIFLNLVLGSVSIPLQSVWHIIWNLGNEPITWQNIIWKSRLPQALTALVAGAGLSISGLQMQ TVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSKLGFMGEIALSIAAVIGSLSVMALIVYVSQKVKGNVTLLII GVMIGYVANAVIGVLKFFSVEEDIRAYVIWGLGSFARVSGNQMTLFVILMTILIPLSFLLIKTMNLMLLGDSYARNLGLN IKRARLLVITSAGVLTAIVTAYCGPIIFLGLAVPHLCRAIFQTSDHRILMPAVLFAGAALALICNLIARMPGFEGALPVN SVTALVGAPVVASVLFRKRKNELNEQDETRYDSY
Sequences:
>Translated_354_residues MRHSNTLWMLAIVTAIFVLIFLNLVLGSVSIPLQSVWHIIWNLGNEPITWQNIIWKSRLPQALTALVAGAGLSISGLQMQ TVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSKLGFMGEIALSIAAVIGSLSVMALIVYVSQKVKGNVTLLII GVMIGYVANAVIGVLKFFSVEEDIRAYVIWGLGSFARVSGNQMTLFVILMTILIPLSFLLIKTMNLMLLGDSYARNLGLN IKRARLLVITSAGVLTAIVTAYCGPIIFLGLAVPHLCRAIFQTSDHRILMPAVLFAGAALALICNLIARMPGFEGALPVN SVTALVGAPVVASVLFRKRKNELNEQDETRYDSY >Mature_354_residues MRHSNTLWMLAIVTAIFVLIFLNLVLGSVSIPLQSVWHIIWNLGNEPITWQNIIWKSRLPQALTALVAGAGLSISGLQMQ TVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSKLGFMGEIALSIAAVIGSLSVMALIVYVSQKVKGNVTLLII GVMIGYVANAVIGVLKFFSVEEDIRAYVIWGLGSFARVSGNQMTLFVILMTILIPLSFLLIKTMNLMLLGDSYARNLGLN IKRARLLVITSAGVLTAIVTAYCGPIIFLGLAVPHLCRAIFQTSDHRILMPAVLFAGAALALICNLIARMPGFEGALPVN SVTALVGAPVVASVLFRKRKNELNEQDETRYDSY
Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788004, Length=287, Percent_Identity=32.7526132404181, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1790740, Length=321, Percent_Identity=31.1526479750779, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1790741, Length=344, Percent_Identity=29.0697674418605, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1786805, Length=297, Percent_Identity=31.986531986532, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786804, Length=278, Percent_Identity=30.5755395683453, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786347, Length=284, Percent_Identity=25.3521126760563, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37866; Mature: 37866
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSNTLWMLAIVTAIFVLIFLNLVLGSVSIPLQSVWHIIWNLGNEPITWQNIIWKSRLP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH QALTALVAGAGLSISGLQMQTVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSK HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHH LGFMGEIALSIAAVIGSLSVMALIVYVSQKVKGNVTLLIIGVMIGYVANAVIGVLKFFSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EEDIRAYVIWGLGSFARVSGNQMTLFVILMTILIPLSFLLIKTMNLMLLGDSYARNLGLN HHHHHEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCC IKRARLLVITSAGVLTAIVTAYCGPIIFLGLAVPHLCRAIFQTSDHRILMPAVLFAGAAL EEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH ALICNLIARMPGFEGALPVNSVTALVGAPVVASVLFRKRKNELNEQDETRYDSY HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure MRHSNTLWMLAIVTAIFVLIFLNLVLGSVSIPLQSVWHIIWNLGNEPITWQNIIWKSRLP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH QALTALVAGAGLSISGLQMQTVFRNPLAGPSVLGISSGASMGVAFVVLLSGSLGGVALSK HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHH LGFMGEIALSIAAVIGSLSVMALIVYVSQKVKGNVTLLIIGVMIGYVANAVIGVLKFFSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EEDIRAYVIWGLGSFARVSGNQMTLFVILMTILIPLSFLLIKTMNLMLLGDSYARNLGLN HHHHHEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCC IKRARLLVITSAGVLTAIVTAYCGPIIFLGLAVPHLCRAIFQTSDHRILMPAVLFAGAAL EEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH ALICNLIARMPGFEGALPVNSVTALVGAPVVASVLFRKRKNELNEQDETRYDSY HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]
Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA