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The map label for this gene is araC [C]

Identifier: 150007621

GI number: 150007621

Start: 1132768

End: 1133601

Strand: Direct

Name: araC [C]

Synonym: BDI_0974

Alternate gene names: 150007621

Gene position: 1132768-1133601 (Clockwise)

Preceding gene: 150007616

Following gene: 150007623

Centisome position: 23.54

GC content: 46.76

Gene sequence:

>834_bases
ATGAATCCATTTGAGATAGAGAGAGGAGAGTCGTTCATAATAGGCGATTCCGATTTGAGGGAGTTATTGGATCGTCCTTA
CAAGAGCGGATATGGCATGATCTTATTTTGCTATAAAGGAACGGCGAATATATCCGTCGATTTGAGCCGATGGGATATCC
GGCGCAACACGGTGATCGTATTGATACCGGATACGATCCTGACGTTGAATGCGAGTAGCGAGGATTTCAAGGTACAATAT
ATATCCTTTTCGAAGGTCTTGTTCGACGAGGCCGTATTCCGGCTGGATCCGCCCTTTTTCCGCTTCATAAAGGATAGCCC
TTGCTATACGCATCCCGCCGATCAGGAGGAGACCATAAATGTGATCATCCGGCTGTTTTGGCTGATTTACATGGATCGGA
ATAACGTGTACCGTGATATGATCGTGAAAAACCAGTTGCAATGCTTCTTCCTTAATATGTATGATAAGACAAGGTACTCC
TTTTCGAGCCGCCAGCAAAATGGGTGCAACCGTGGGGAGGAGTTGTTCCATAAGTTCATCAATTGCATCCATGCCCATTA
TCTCGACCAGAAAGAGGTCTCTTTCTATGCGAACGAGCTTTGTATCTCTCCCCGTTATCTCTCCACTATCACCCGGCAAG
TGGCGGGCGAGTCGGCGAAGACCATTATAGACCGGCATATCATATTGGAGACAAAGGTGTTGTTGCGTACCACGGAAATG
ACCGTGCAGGAGATAACGAACCACTTGAACTTTCCCAGCCAATCCTATCTGGGACGGTATTTCAAGAAGCATACGGGGGA
GTCACCCATAGAGTATCGAATGAAAAGGAAGTGA

Upstream 100 bases:

>100_bases
ACCATTGTTTCCACAATGAGGCGATGATTGTTCATTTTGAGATGGAATGATCCGTTATATGCTAATGATCTCTTATATTC
GCGGGCAAAATAGTAGACAT

Downstream 100 bases:

>100_bases
TACCACTTACTGCAAGGCGGGTTGCAGTAAAATAGCCATGAGGTTTTGTCCTTATAAAGCTGTGGAAGCTTTTCCCGTTT
GCCCTTGATCGAACGTATCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC Family Transcriptional Regulator; AraC-Type Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Phosphomethylpyrimidine Kinase; Transcriptional Regulator PobR; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; AraC/XylS Family Transcriptional Regulator; AraC-Family Regulatory Protein; Transcription Regulator AraC-Type; Bacterial Regulatory Helix-Turn-Helix Protein; AraC-Type Transcriptional Regulator; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Pobr Arac Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulatory Protein; AraC-Family Transcriptional Regulator; AraC/XylS Family Transcription Factor

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNPFEIERGESFIIGDSDLRELLDRPYKSGYGMILFCYKGTANISVDLSRWDIRRNTVIVLIPDTILTLNASSEDFKVQY
ISFSKVLFDEAVFRLDPPFFRFIKDSPCYTHPADQEETINVIIRLFWLIYMDRNNVYRDMIVKNQLQCFFLNMYDKTRYS
FSSRQQNGCNRGEELFHKFINCIHAHYLDQKEVSFYANELCISPRYLSTITRQVAGESAKTIIDRHIILETKVLLRTTEM
TVQEITNHLNFPSQSYLGRYFKKHTGESPIEYRMKRK

Sequences:

>Translated_277_residues
MNPFEIERGESFIIGDSDLRELLDRPYKSGYGMILFCYKGTANISVDLSRWDIRRNTVIVLIPDTILTLNASSEDFKVQY
ISFSKVLFDEAVFRLDPPFFRFIKDSPCYTHPADQEETINVIIRLFWLIYMDRNNVYRDMIVKNQLQCFFLNMYDKTRYS
FSSRQQNGCNRGEELFHKFINCIHAHYLDQKEVSFYANELCISPRYLSTITRQVAGESAKTIIDRHIILETKVLLRTTEM
TVQEITNHLNFPSQSYLGRYFKKHTGESPIEYRMKRK
>Mature_277_residues
MNPFEIERGESFIIGDSDLRELLDRPYKSGYGMILFCYKGTANISVDLSRWDIRRNTVIVLIPDTILTLNASSEDFKVQY
ISFSKVLFDEAVFRLDPPFFRFIKDSPCYTHPADQEETINVIIRLFWLIYMDRNNVYRDMIVKNQLQCFFLNMYDKTRYS
FSSRQQNGCNRGEELFHKFINCIHAHYLDQKEVSFYANELCISPRYLSTITRQVAGESAKTIIDRHIILETKVLLRTTEM
TVQEITNHLNFPSQSYLGRYFKKHTGESPIEYRMKRK

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32796; Mature: 32796

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFEIERGESFIIGDSDLRELLDRPYKSGYGMILFCYKGTANISVDLSRWDIRRNTVIV
CCCCCCCCCCEEEECCHHHHHHHHCHHHCCCCEEEEEEECCCCEEEEEEHEEECCCEEEE
LIPDTILTLNASSEDFKVQYISFSKVLFDEAVFRLDPPFFRFIKDSPCYTHPADQEETIN
EECCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHH
VIIRLFWLIYMDRNNVYRDMIVKNQLQCFFLNMYDKTRYSFSSRQQNGCNRGEELFHKFI
HHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NCIHAHYLDQKEVSFYANELCISPRYLSTITRQVAGESAKTIIDRHIILETKVLLRTTEM
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TVQEITNHLNFPSQSYLGRYFKKHTGESPIEYRMKRK
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MNPFEIERGESFIIGDSDLRELLDRPYKSGYGMILFCYKGTANISVDLSRWDIRRNTVIV
CCCCCCCCCCEEEECCHHHHHHHHCHHHCCCCEEEEEEECCCCEEEEEEHEEECCCEEEE
LIPDTILTLNASSEDFKVQYISFSKVLFDEAVFRLDPPFFRFIKDSPCYTHPADQEETIN
EECCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHH
VIIRLFWLIYMDRNNVYRDMIVKNQLQCFFLNMYDKTRYSFSSRQQNGCNRGEELFHKFI
HHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NCIHAHYLDQKEVSFYANELCISPRYLSTITRQVAGESAKTIIDRHIILETKVLLRTTEM
HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TVQEITNHLNFPSQSYLGRYFKKHTGESPIEYRMKRK
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA