| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is hisB [H]
Identifier: 150007616
GI number: 150007616
Start: 1124522
End: 1125658
Strand: Direct
Name: hisB [H]
Synonym: BDI_0969
Alternate gene names: 150007616
Gene position: 1124522-1125658 (Clockwise)
Preceding gene: 150007615
Following gene: 150007621
Centisome position: 23.37
GC content: 52.59
Gene sequence:
>1137_bases ATGAGCACGAGGAAAAGAGCGTTGTTTATCGACCGGGACGGCACGCTTGTAAAAGAGCCGCCCGTAGATTATCAATTGGA TAGCTTGGAGAAACTAGAGTTTGTCCCGAAGGTGATGCGTAACCTCTATTTCATTCGCGAGCGGTTGGATTTCGAGTTCG TGATGGTCTCCAACCAAGACGGGCTGGGAACGCCCTCTTTCCCGGAGGAGACTTTCTGGCCTGCCCATAACTTGATGCTA AAGACGCTGGAAGGCGAGGGGATCGTGTTCGACGATATCTTGATCGATCCTTCCTTTCCCGAGGATAATTCCCCGAATCG TAAGCCTCGTACGGGAATGCTCACGAAATATATGACCGGTGAATACGATCTGGAGAATAGTTTCGTGATCGGGGACCGCC TTACGGATATGGAGTTGGCCCATAATCTGGGCGCTAAAGGTATCTGGTTGCGCCCGGAGGAGGGAGCGGAGAGTGAGTTG GCGGCTTACGCTACCTCATTGTCTCCCGCCTATATCACGGATGATTGGGATAAGATCACCGAGTATCTGTTTGCCGGCGA GCGTCGTGCGGTCGTACGGCGTGCCACGAAGGAGACGGACATCTATGTGGACTGGAATCTGGATGGAACCGGAAAGACAT CGATCTCTACCGGGCTTGGTTTCTTCGATCATATGTTGGATCAGATCGGTAAGCATTCCGGTACGGATCTGACGGTACGG GTAAAAGGCGACCTGGAGGTCGACGAGCATCATACGATAGAGGATACGGCGATTGCCCTTGGCGAGGCGATGCTGAAAGC GCTGGGTGATAAGCGAGGGATCGAGCGTTATGGCTATTGCCTTCCGATGGACGATTGCTTGTGTAGTGTGGCGCTGGATT TCGGTGGCCGTCCTTGGTTGGTTTGGGACGCTGAGTTCCACCGTGAGAAAGTGGGAGATATGCCTACGGAGATGTTCCTC CATTTCTTCAAGAGCTTGAGCGACGCTGCCCGCATGAATTTGAATATCCGTGCCGAGGGTACGAACGAGCATCATAAGAT AGAAGGTATCTTCAAGGCTTTGGCCCGCTCGATCAAGATGGCGATCCGACGAGATATTTATCGGTTTGAGCTACCGAGTA CGAAAGGGCTCTTGTAA
Upstream 100 bases:
>100_bases ACCGTAGTAACGTGCAGAAATGCCGGGGTTGCCTTCGTATTACGATCGGTACGCCGAAAGAGAATGATAGCTTATTGAAC GCGATGAAAAACATGAAATT
Downstream 100 bases:
>100_bases TCTGTAAAAAACACTACTGTATTTGTGCACGAATACAGTAGTGTTTTAGTCTGAATACTATTGTGTTTATCCACAAACAC TATAGTGTTTTCGACTCAGA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSTRKRALFIDRDGTLVKEPPVDYQLDSLEKLEFVPKVMRNLYFIRERLDFEFVMVSNQDGLGTPSFPEETFWPAHNLML KTLEGEGIVFDDILIDPSFPEDNSPNRKPRTGMLTKYMTGEYDLENSFVIGDRLTDMELAHNLGAKGIWLRPEEGAESEL AAYATSLSPAYITDDWDKITEYLFAGERRAVVRRATKETDIYVDWNLDGTGKTSISTGLGFFDHMLDQIGKHSGTDLTVR VKGDLEVDEHHTIEDTAIALGEAMLKALGDKRGIERYGYCLPMDDCLCSVALDFGGRPWLVWDAEFHREKVGDMPTEMFL HFFKSLSDAARMNLNIRAEGTNEHHKIEGIFKALARSIKMAIRRDIYRFELPSTKGLL
Sequences:
>Translated_378_residues MSTRKRALFIDRDGTLVKEPPVDYQLDSLEKLEFVPKVMRNLYFIRERLDFEFVMVSNQDGLGTPSFPEETFWPAHNLML KTLEGEGIVFDDILIDPSFPEDNSPNRKPRTGMLTKYMTGEYDLENSFVIGDRLTDMELAHNLGAKGIWLRPEEGAESEL AAYATSLSPAYITDDWDKITEYLFAGERRAVVRRATKETDIYVDWNLDGTGKTSISTGLGFFDHMLDQIGKHSGTDLTVR VKGDLEVDEHHTIEDTAIALGEAMLKALGDKRGIERYGYCLPMDDCLCSVALDFGGRPWLVWDAEFHREKVGDMPTEMFL HFFKSLSDAARMNLNIRAEGTNEHHKIEGIFKALARSIKMAIRRDIYRFELPSTKGLL >Mature_377_residues STRKRALFIDRDGTLVKEPPVDYQLDSLEKLEFVPKVMRNLYFIRERLDFEFVMVSNQDGLGTPSFPEETFWPAHNLMLK TLEGEGIVFDDILIDPSFPEDNSPNRKPRTGMLTKYMTGEYDLENSFVIGDRLTDMELAHNLGAKGIWLRPEEGAESELA AYATSLSPAYITDDWDKITEYLFAGERRAVVRRATKETDIYVDWNLDGTGKTSISTGLGFFDHMLDQIGKHSGTDLTVRV KGDLEVDEHHTIEDTAIALGEAMLKALGDKRGIERYGYCLPMDDCLCSVALDFGGRPWLVWDAEFHREKVGDMPTEMFLH FFKSLSDAARMNLNIRAEGTNEHHKIEGIFKALARSIKMAIRRDIYRFELPSTKGLL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=375, Percent_Identity=46.1333333333333, Blast_Score=335, Evalue=4e-93, Organism=Escherichia coli, GI1786399, Length=158, Percent_Identity=29.746835443038, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=38.0733944954128, Blast_Score=151, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 43053; Mature: 42922
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRKRALFIDRDGTLVKEPPVDYQLDSLEKLEFVPKVMRNLYFIRERLDFEFVMVSNQD CCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC GLGTPSFPEETFWPAHNLMLKTLEGEGIVFDDILIDPSFPEDNSPNRKPRTGMLTKYMTG CCCCCCCCCCCCCCHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC EYDLENSFVIGDRLTDMELAHNLGAKGIWLRPEEGAESELAAYATSLSPAYITDDWDKIT CCCCCCCEEECCCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCEECCCHHHHH EYLFAGERRAVVRRATKETDIYVDWNLDGTGKTSISTGLGFFDHMLDQIGKHSGTDLTVR HHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE VKGDLEVDEHHTIEDTAIALGEAMLKALGDKRGIERYGYCLPMDDCLCSVALDFGGRPWL EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCCEEE VWDAEFHREKVGDMPTEMFLHFFKSLSDAARMNLNIRAEGTNEHHKIEGIFKALARSIKM EECHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH AIRRDIYRFELPSTKGLL HHHHHHHEEECCCCCCCC >Mature Secondary Structure STRKRALFIDRDGTLVKEPPVDYQLDSLEKLEFVPKVMRNLYFIRERLDFEFVMVSNQD CCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC GLGTPSFPEETFWPAHNLMLKTLEGEGIVFDDILIDPSFPEDNSPNRKPRTGMLTKYMTG CCCCCCCCCCCCCCHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC EYDLENSFVIGDRLTDMELAHNLGAKGIWLRPEEGAESELAAYATSLSPAYITDDWDKIT CCCCCCCEEECCCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCEECCCHHHHH EYLFAGERRAVVRRATKETDIYVDWNLDGTGKTSISTGLGFFDHMLDQIGKHSGTDLTVR HHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE VKGDLEVDEHHTIEDTAIALGEAMLKALGDKRGIERYGYCLPMDDCLCSVALDFGGRPWL EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCCCCEEE VWDAEFHREKVGDMPTEMFLHFFKSLSDAARMNLNIRAEGTNEHHKIEGIFKALARSIKM EECHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH AIRRDIYRFELPSTKGLL HHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA