| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yvyE [H]
Identifier: 150007573
GI number: 150007573
Start: 1066896
End: 1067495
Strand: Direct
Name: yvyE [H]
Synonym: BDI_0926
Alternate gene names: 150007573
Gene position: 1066896-1067495 (Clockwise)
Preceding gene: 150007572
Following gene: 150007574
Centisome position: 22.17
GC content: 51.83
Gene sequence:
>600_bases ATGGCAGACGACAGTTACAAGACCATCAAGCAAGTAGCCGAGGGATATTATACCGAGAAGCGCAGCCGCTTTATCTCGTA TGCTATCCCCGTGCGTACGGTAGAAGAGGTGAAGGAGCAACTGGAGAAATACCGTAAACAATATTATGATGCCCGCCATG TATGCTGGGCGTATATGTTAGGTCCAGAGCGGCAGACGTTCCGGGCCAACGATGACGGGGAGCCTTCTTCCACGGCCGGG AAACCGATCCTCGGACAGATCAACTCGAATGAGCTGACCGATTTATTGATTGTCGTAGTACGTTATTTTGGTGGAATCGA GTTAGGAACCAGCGGGCTGATCGTCGCTTATCGCACGGCCGCCGCCGAGGCTATCGCCGCCGCAGAGATCGAGGAACGTA CGGTAGACGAGGACATCACGGTCGTTTTCGAATACCCATACCTGAACGGGATCATGCGTATCGTAAAAGAGGATAACCCC GCTATCATCTCACAGAAGTTCGAGATGGATTGCGAGATGACGCTTCGTATCCGTAAAGGGGAGGCCGAACGCCTCAAGAA TCGCTTGTTAAAGGTTGAGACCGCTTATCTAAAAGAGTAG
Upstream 100 bases:
>100_bases GGTGAAAGATCCTTATTTCATCGAGGAGATCGAAGAGATCATGAAAGATTTCCGGGCGTACCGGGAGGAAGTGTCTAACA CTAAAATACCGGATTGATTT
Downstream 100 bases:
>100_bases CAAGCGATCAACTAATTCAATTTTCAATTGTTTTTTGTAGAGACAAGGCTCATGAGGAACCCTGCCCCTGCATTTTATTG TGTAAATATTAATATAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MADDSYKTIKQVAEGYYTEKRSRFISYAIPVRTVEEVKEQLEKYRKQYYDARHVCWAYMLGPERQTFRANDDGEPSSTAG KPILGQINSNELTDLLIVVVRYFGGIELGTSGLIVAYRTAAAEAIAAAEIEERTVDEDITVVFEYPYLNGIMRIVKEDNP AIISQKFEMDCEMTLRIRKGEAERLKNRLLKVETAYLKE
Sequences:
>Translated_199_residues MADDSYKTIKQVAEGYYTEKRSRFISYAIPVRTVEEVKEQLEKYRKQYYDARHVCWAYMLGPERQTFRANDDGEPSSTAG KPILGQINSNELTDLLIVVVRYFGGIELGTSGLIVAYRTAAAEAIAAAEIEERTVDEDITVVFEYPYLNGIMRIVKEDNP AIISQKFEMDCEMTLRIRKGEAERLKNRLLKVETAYLKE >Mature_198_residues ADDSYKTIKQVAEGYYTEKRSRFISYAIPVRTVEEVKEQLEKYRKQYYDARHVCWAYMLGPERQTFRANDDGEPSSTAGK PILGQINSNELTDLLIVVVRYFGGIELGTSGLIVAYRTAAAEAIAAAEIEERTVDEDITVVFEYPYLNGIMRIVKEDNPA IISQKFEMDCEMTLRIRKGEAERLKNRLLKVETAYLKE
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=151, Percent_Identity=36.4238410596026, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22826; Mature: 22695
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDSYKTIKQVAEGYYTEKRSRFISYAIPVRTVEEVKEQLEKYRKQYYDARHVCWAYML CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GPERQTFRANDDGEPSSTAGKPILGQINSNELTDLLIVVVRYFGGIELGTSGLIVAYRTA CCCCCEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEECCCCEEEEEHHH AAEAIAAAEIEERTVDEDITVVFEYPYLNGIMRIVKEDNPAIISQKFEMDCEMTLRIRKG HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCEEHHHHCCCCEEEEEEECC EAERLKNRLLKVETAYLKE HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADDSYKTIKQVAEGYYTEKRSRFISYAIPVRTVEEVKEQLEKYRKQYYDARHVCWAYML CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GPERQTFRANDDGEPSSTAGKPILGQINSNELTDLLIVVVRYFGGIELGTSGLIVAYRTA CCCCCEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEECCCCEEEEEHHH AAEAIAAAEIEERTVDEDITVVFEYPYLNGIMRIVKEDNPAIISQKFEMDCEMTLRIRKG HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCEEHHHHCCCCEEEEEEECC EAERLKNRLLKVETAYLKE HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]