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The map label for this gene is yqfA [C]

Identifier: 150007564

GI number: 150007564

Start: 1052458

End: 1053108

Strand: Direct

Name: yqfA [C]

Synonym: BDI_0917

Alternate gene names: 150007564

Gene position: 1052458-1053108 (Clockwise)

Preceding gene: 150007563

Following gene: 150007571

Centisome position: 21.87

GC content: 46.08

Gene sequence:

>651_bases
ATGAGAAAACAAAGACAGACTCATGGTGAGGAAGTAGCGAATGTGCTTACGCATGGTGCGGGCATGTTGTTCGGCTTAAC
GGCGATTGTCGTCTTGATGATCGCCGGGATTCGTACAGGTGATCCGTGGGTGATCGGTAGTTTCGCCGTTTATGCGTTGT
GCATGACTTCCTCGTATGTGACCTCTACCTTTTACCACGCCGCTTCCGATCCCAAGCGGAAATGCCAGTTGCGCCGTTGG
GATCATAGCGCTATTTATTTGCATATTGCGGGTACTTATACGCCATTTACCTTGGTGGCTCTCCGCGACGAGGGTTTCTG
GGGCTGGGGATTATTTATTACGGTTTGGCTGGCAGCGGTTATCGGCGTATGGTTTAGCTTCCGTCGGATGAAGAAAAAGG
ATAATCTGAAAACGGTTTGTTATCTGCTGATGAGCTGGGTGGTGATTATCGCTTTCAAACCATTGATCGATGTTTTCCAG
CGTACGGATTCGATGTATGTCTTATATTGGTTGATCGGAGGAGGCTTGTTCTATTCCTTAGGAACGATTTTTTTCTTTCT
GGATAAATATAAATATATGCATTCCGCATGGCATTTATTCGTTCTCGGGGGAACGGTTTGCCATTTTATAGCGATCTATA
ATTTGGTGTAA

Upstream 100 bases:

>100_bases
CATTGACTATAACAACCGATCTTCCGGCGGAGACAATTCTTTCCGCCGTATCGGAGGCCGGTTTCAAGGCTAGCGCCTTG
TAGTCGTAGCGATCGGATGG

Downstream 100 bases:

>100_bases
GGAAAAATAAAGAAGCCGGAACTGTGTTTAGCGGTTCCGGCTTCTTTTATTCTTGTTCTTCCGGATGTTGTTTCTTGTAT
TTATAATCCGCTAAAATCAA

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRKQRQTHGEEVANVLTHGAGMLFGLTAIVVLMIAGIRTGDPWVIGSFAVYALCMTSSYVTSTFYHAASDPKRKCQLRRW
DHSAIYLHIAGTYTPFTLVALRDEGFWGWGLFITVWLAAVIGVWFSFRRMKKKDNLKTVCYLLMSWVVIIAFKPLIDVFQ
RTDSMYVLYWLIGGGLFYSLGTIFFFLDKYKYMHSAWHLFVLGGTVCHFIAIYNLV

Sequences:

>Translated_216_residues
MRKQRQTHGEEVANVLTHGAGMLFGLTAIVVLMIAGIRTGDPWVIGSFAVYALCMTSSYVTSTFYHAASDPKRKCQLRRW
DHSAIYLHIAGTYTPFTLVALRDEGFWGWGLFITVWLAAVIGVWFSFRRMKKKDNLKTVCYLLMSWVVIIAFKPLIDVFQ
RTDSMYVLYWLIGGGLFYSLGTIFFFLDKYKYMHSAWHLFVLGGTVCHFIAIYNLV
>Mature_216_residues
MRKQRQTHGEEVANVLTHGAGMLFGLTAIVVLMIAGIRTGDPWVIGSFAVYALCMTSSYVTSTFYHAASDPKRKCQLRRW
DHSAIYLHIAGTYTPFTLVALRDEGFWGWGLFITVWLAAVIGVWFSFRRMKKKDNLKTVCYLLMSWVVIIAFKPLIDVFQ
RTDSMYVLYWLIGGGLFYSLGTIFFFLDKYKYMHSAWHLFVLGGTVCHFIAIYNLV

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=219, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1789266, Length=213, Percent_Identity=36.6197183098592, Blast_Score=140, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI71996356, Length=218, Percent_Identity=30.7339449541284, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24640324, Length=233, Percent_Identity=30.0429184549356, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24784; Mature: 24784

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQRQTHGEEVANVLTHGAGMLFGLTAIVVLMIAGIRTGDPWVIGSFAVYALCMTSSYV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH
TSTFYHAASDPKRKCQLRRWDHSAIYLHIAGTYTPFTLVALRDEGFWGWGLFITVWLAAV
HHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH
IGVWFSFRRMKKKDNLKTVCYLLMSWVVIIAFKPLIDVFQRTDSMYVLYWLIGGGLFYSL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
GTIFFFLDKYKYMHSAWHLFVLGGTVCHFIAIYNLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKQRQTHGEEVANVLTHGAGMLFGLTAIVVLMIAGIRTGDPWVIGSFAVYALCMTSSYV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH
TSTFYHAASDPKRKCQLRRWDHSAIYLHIAGTYTPFTLVALRDEGFWGWGLFITVWLAAV
HHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH
IGVWFSFRRMKKKDNLKTVCYLLMSWVVIIAFKPLIDVFQRTDSMYVLYWLIGGGLFYSL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
GTIFFFLDKYKYMHSAWHLFVLGGTVCHFIAIYNLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]