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The map label for this gene is ssb [H]

Identifier: 150007516

GI number: 150007516

Start: 1006918

End: 1007322

Strand: Direct

Name: ssb [H]

Synonym: BDI_0868

Alternate gene names: 150007516

Gene position: 1006918-1007322 (Clockwise)

Preceding gene: 150007515

Following gene: 150007517

Centisome position: 20.93

GC content: 45.43

Gene sequence:

>405_bases
ATGAGCATAAATAAAGTAATCCTTCTCGGTTATACCGGCAAGGATCCTGAAGTGAAAGATGTTGCCGGGACAAAGGTCGC
CAATCTATCGCTTGCTACCACGGAGAAGGGTTATACCCTTCAAAACGGGACCCAAGTTCCGGACCGCACGGAATGGCATA
ACCTTGTCTTTTGGAAAGGTCTGGCCGAGGTCGTAGAAAAGTATGTTAGGAAGGGTTCTCAAATCTATATCGAGGGTAAG
ATCAAGACCCGGCTGTATGAGGATAGAATGGGATCAAAGCGGTATGTGACAGAAATATTTGTTGATAAGCTGGAATTATT
GGGAAGTAGACCTGCTCAGCAAGAAGCCAGTCCACAATCGGCACTCTATCAACCTGAGCAACCAAAAGATGATCTTCCAT
TCTAA

Upstream 100 bases:

>100_bases
ATGGAATCTCAAATAACCAATACAAAGATGGCTATAAGAAAGGATTTCATGCCGGCGTTGAATATGTTATAGAATTTGCA
AAACAAAAAAAGAATGAAGA

Downstream 100 bases:

>100_bases
AAACACAAGAGGCAACGCCCCGAACAACCAGTAACGTCACCTCTCCACACGATTATTTAGTGCAAATATAAATATTTACT
TTTAAATAATCGTGCCATGT

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSINKVILLGYTGKDPEVKDVAGTKVANLSLATTEKGYTLQNGTQVPDRTEWHNLVFWKGLAEVVEKYVRKGSQIYIEGK
IKTRLYEDRMGSKRYVTEIFVDKLELLGSRPAQQEASPQSALYQPEQPKDDLPF

Sequences:

>Translated_134_residues
MSINKVILLGYTGKDPEVKDVAGTKVANLSLATTEKGYTLQNGTQVPDRTEWHNLVFWKGLAEVVEKYVRKGSQIYIEGK
IKTRLYEDRMGSKRYVTEIFVDKLELLGSRPAQQEASPQSALYQPEQPKDDLPF
>Mature_133_residues
SINKVILLGYTGKDPEVKDVAGTKVANLSLATTEKGYTLQNGTQVPDRTEWHNLVFWKGLAEVVEKYVRKGSQIYIEGKI
KTRLYEDRMGSKRYVTEIFVDKLELLGSRPAQQEASPQSALYQPEQPKDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=123, Percent_Identity=38.2113821138211, Blast_Score=70, Evalue=7e-13,
Organism=Escherichia coli, GI1790494, Length=112, Percent_Identity=45.5357142857143, Blast_Score=99, Evalue=8e-23,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15193; Mature: 15061

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINKVILLGYTGKDPEVKDVAGTKVANLSLATTEKGYTLQNGTQVPDRTEWHNLVFWKG
CCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHH
LAEVVEKYVRKGSQIYIEGKIKTRLYEDRMGSKRYVTEIFVDKLELLGSRPAQQEASPQS
HHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
ALYQPEQPKDDLPF
HCCCCCCCCCCCCC
>Mature Secondary Structure 
SINKVILLGYTGKDPEVKDVAGTKVANLSLATTEKGYTLQNGTQVPDRTEWHNLVFWKG
CCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHH
LAEVVEKYVRKGSQIYIEGKIKTRLYEDRMGSKRYVTEIFVDKLELLGSRPAQQEASPQS
HHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
ALYQPEQPKDDLPF
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]