| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is eco47IIM [H]
Identifier: 150007509
GI number: 150007509
Start: 1002546
End: 1003829
Strand: Direct
Name: eco47IIM [H]
Synonym: BDI_0861
Alternate gene names: 150007509
Gene position: 1002546-1003829 (Clockwise)
Preceding gene: 150007508
Following gene: 150007510
Centisome position: 20.84
GC content: 49.22
Gene sequence:
>1284_bases ATGACACATGGATCATTATTTTCTGGCGTGGGCGGTTTTGACCTTGCCGCCGAATGGATGGGATGGGAGAACCTGTTCCA TTGCGAGATTAACGAGTGGTGCCAAAAGGTACTGAGGTTTCATTTCCCAAAAAGCATTCAATATGACGATATTACAAGAA CTGATTTCACTCCGTGGAGAGGGAAGGTTGACGTACTCACAGGAGGGTTCCCTTGTCAGCCATTTTCAACGGCAGGAAAG CGAAGGGGAGCGGAAGATGACCGTTACCTCTGGCCGGAAATGCTTCGGGCAATACGGGAGATACGACCCGCTTGGGTCAT TGGTGAGAACGTTGCTGGAATCACCAGCATGGTACAACCCGGCAGTGAGGTTACGGTGGAAAGTCAAGCCTCTTTGTTTG AAAAGGCTGACAAGGAAACAATACTCGAACAAGAGTACGTTATCGAAACCGTCTGCCGAGATCTTGAACGTGAGGGATAT TCCGTCCAGCCGATTCTTATTCCAGCTTGCGGTGTCGGAGCGCCGCACAAGAGGGACAGGGTATGGTTTATTGCCCACTC CGAGGGCGATGGAGATCGTGGAGCATCCCATGAAGGCGGCGGAACGACTCAAGGATCGTACGGGAAAGAAATTGAACAAT CTTTCATCGGGAGCGGCATTTGGACTACTTCCCACCCCAACTGCTCAAGAGGGCTTCAATTCGGGGAAAGGAGAGATATT CGTGACAAGGAACAATACGATCAGGATAAGGAACCAGAACGGCACGAGCAGCCGTCTAGGTTTGGAGGGAGCGGTGAAGC ATATGTTATATCCGACACCGACAGCCCAAGATTTCAAGCGAAGGGGTCCGAACAGCAAACAACAGGGATTACCGGAGGCG GCCTACGAAAAGATGTTACCGACACCTACGGCGAGAAGCTACAAACATGGCTCAAAAATAACGGACGGGAGATCGAGGAG GAAAATATCGCAAGGCTGGACAATGGAGTTGAACGATCTTGCTGTATCAGGGCTTTTGCCGAATCCGACAAGAAGAGACG ATGCCTTATGCAATATACCAGTAATGATTGGCCAGCATTGTCAGCAGAACTATGGAAAGACTTCCCAACTCAACCCCCTG TTTGTCGAAGAAATGATGGGTTACCCTTTGATGTGGACTACCTTGCCATTCCTTTCACAAAATGGAGACAAGAATCCATA AAAGCCTACGGAAACGCCATCGTCCCACAAGTAGCATTTGAGATATTCAAGGCGATAGAAACATCAACCTTTCATCATAG TTGA
Upstream 100 bases:
>100_bases TGTAAGCGTTGCAGATCGGACACTGCGAATACAGCAAGGCTTGCATGGCCCATCTGAGGCCGGACCATGAAAGCGTAGTT TTTGCTAAAACGAGAGAGAC
Downstream 100 bases:
>100_bases AAACTGCATTCATCTATGATGAGAGCAAAGAAAGAATATAAAATTATATGAGAACACCAATCACATATTATGGAGGCAAG CAAAACTTGTCCGAACGCAT
Product: site-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.Eco47II; Cytosine-specific methyltransferase Eco47II [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTHGSLFSGVGGFDLAAEWMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDFTPWRGKVDVLTGGFPCQPFSTAGK RRGAEDDRYLWPEMLRAIREIRPAWVIGENVAGITSMVQPGSEVTVESQASLFEKADKETILEQEYVIETVCRDLEREGY SVQPILIPACGVGAPHKRDRVWFIAHSEGDGDRGASHEGGGTTQGSYGKEIEQSFIGSGIWTTSHPNCSRGLQFGERRDI RDKEQYDQDKEPERHEQPSRFGGSGEAYVISDTDSPRFQAKGSEQQTTGITGGGLRKDVTDTYGEKLQTWLKNNGREIEE ENIARLDNGVERSCCIRAFAESDKKRRCLMQYTSNDWPALSAELWKDFPTQPPVCRRNDGLPFDVDYLAIPFTKWRQESI KAYGNAIVPQVAFEIFKAIETSTFHHS
Sequences:
>Translated_427_residues MTHGSLFSGVGGFDLAAEWMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDFTPWRGKVDVLTGGFPCQPFSTAGK RRGAEDDRYLWPEMLRAIREIRPAWVIGENVAGITSMVQPGSEVTVESQASLFEKADKETILEQEYVIETVCRDLEREGY SVQPILIPACGVGAPHKRDRVWFIAHSEGDGDRGASHEGGGTTQGSYGKEIEQSFIGSGIWTTSHPNCSRGLQFGERRDI RDKEQYDQDKEPERHEQPSRFGGSGEAYVISDTDSPRFQAKGSEQQTTGITGGGLRKDVTDTYGEKLQTWLKNNGREIEE ENIARLDNGVERSCCIRAFAESDKKRRCLMQYTSNDWPALSAELWKDFPTQPPVCRRNDGLPFDVDYLAIPFTKWRQESI KAYGNAIVPQVAFEIFKAIETSTFHHS >Mature_426_residues THGSLFSGVGGFDLAAEWMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDFTPWRGKVDVLTGGFPCQPFSTAGKR RGAEDDRYLWPEMLRAIREIRPAWVIGENVAGITSMVQPGSEVTVESQASLFEKADKETILEQEYVIETVCRDLEREGYS VQPILIPACGVGAPHKRDRVWFIAHSEGDGDRGASHEGGGTTQGSYGKEIEQSFIGSGIWTTSHPNCSRGLQFGERRDIR DKEQYDQDKEPERHEQPSRFGGSGEAYVISDTDSPRFQAKGSEQQTTGITGGGLRKDVTDTYGEKLQTWLKNNGREIEEE NIARLDNGVERSCCIRAFAESDKKRRCLMQYTSNDWPALSAELWKDFPTQPPVCRRNDGLPFDVDYLAIPFTKWRQESIK AYGNAIVPQVAFEIFKAIETSTFHHS
Specific function: This methylase recognizes the double-stranded sequence GGNCC, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the Eco47II endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 - InterPro: IPR009061 - InterPro: IPR000551 [H]
Pfam domain/function: PF00145 DNA_methylase; PF00376 MerR [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 48314; Mature: 48183
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00094 C5_MTASE_1 ; PS00095 C5_MTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGSLFSGVGGFDLAAEWMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDFTPWR CCCCCHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GKVDVLTGGFPCQPFSTAGKRRGAEDDRYLWPEMLRAIREIRPAWVIGENVAGITSMVQP CEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCC GSEVTVESQASLFEKADKETILEQEYVIETVCRDLEREGYSVQPILIPACGVGAPHKRDR CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCE VWFIAHSEGDGDRGASHEGGGTTQGSYGKEIEQSFIGSGIWTTSHPNCSRGLQFGERRDI EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC RDKEQYDQDKEPERHEQPSRFGGSGEAYVISDTDSPRFQAKGSEQQTTGITGGGLRKDVT CCHHHCCCCCCCHHHCCCHHCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCHHHH DTYGEKLQTWLKNNGREIEEENIARLDNGVERSCCIRAFAESDKKRRCLMQYTSNDWPAL HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCH SAELWKDFPTQPPVCRRNDGLPFDVDYLAIPFTKWRQESIKAYGNAIVPQVAFEIFKAIE HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH TSTFHHS HHCCCCC >Mature Secondary Structure THGSLFSGVGGFDLAAEWMGWENLFHCEINEWCQKVLRFHFPKSIQYDDITRTDFTPWR CCCCHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GKVDVLTGGFPCQPFSTAGKRRGAEDDRYLWPEMLRAIREIRPAWVIGENVAGITSMVQP CEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCC GSEVTVESQASLFEKADKETILEQEYVIETVCRDLEREGYSVQPILIPACGVGAPHKRDR CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCE VWFIAHSEGDGDRGASHEGGGTTQGSYGKEIEQSFIGSGIWTTSHPNCSRGLQFGERRDI EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC RDKEQYDQDKEPERHEQPSRFGGSGEAYVISDTDSPRFQAKGSEQQTTGITGGGLRKDVT CCHHHCCCCCCCHHHCCCHHCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCHHHH DTYGEKLQTWLKNNGREIEEENIARLDNGVERSCCIRAFAESDKKRRCLMQYTSNDWPAL HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCH SAELWKDFPTQPPVCRRNDGLPFDVDYLAIPFTKWRQESIKAYGNAIVPQVAFEIFKAIE HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH TSTFHHS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7607524 [H]