| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150007507
Identifier: 150007507
GI number: 150007507
Start: 1000939
End: 1001874
Strand: Direct
Name: 150007507
Synonym: BDI_0859
Alternate gene names: NA
Gene position: 1000939-1001874 (Clockwise)
Preceding gene: 150007506
Following gene: 150007508
Centisome position: 20.8
GC content: 39.64
Gene sequence:
>936_bases ATGGATAAAGGATTCATAATGCTCTCACGTAAGTTTTTCTCTAATGAAATGTGGGAAGCAGCCCGGACTTTTAGCGAGTG CGAAGCGTGGCTCGATTTGATTCAGAGTGCACGATTTGATGCAACGCGGCTTACAGCCAGTATCGGAGGTAGAGAAATAA CATACGGAAGAGGACAATATCCGGCATCTGTGCGCTTCCTGTCTAAACGTTGGAGGTGGGGAGAACAAAAAGTTAGGAGC TTTATTGAAAAGTTGATAAAAAAGGGAATGGTCACTACTGATAACTCACAGGGCATGACCGTTATAACATTAGTGAAATA TGATGATTATAATATCAATAACACAGCAAATAACACACAAGATAACACATCTAACGTATTGGATTATAATAGAATAAAAG AGTTTGTAACACAGGTTGTAACACAGCAAATAACACAACTACAACACAGCGATAACACAAAGAAGAATAAAGAAAATAAA GAGAAAAATATAGGAGATTCTGACGAATCTCTTGTATGTGGGACTTCGCAGCCCCACACCGAACATATCGATTACTCCGA ACTTGTCAAATTCTTCAATGAAGAAACAAAAGGTGTATTTGGTACGGTCAGGACTCCGCTTTCTGATAGCCGTAAAGGGA TGATTAACGCACGTATAAAATCTTACGGCAAAAAGACGTTTGCCGACATGATTCGTAAGGCATACCAAAGCGATTTCCTG AAAGGGCAGAACAAAAAAGGCTGGACAGCATCTTTCGATTGGCTTATCAAACCAACGAATTTTGAGAAAGTAATATCAGG TAATTATGACAACAAGAATAGCAGAAACGATCCGGCAATTCCAAACAGGGCAAAATCACGAGAAGAACAAACAGACCGTG AAATCCTCGAATATGCCGCAAAAGCTTTCGGAAAAGGCATGGTTAGTAGTAAATAG
Upstream 100 bases:
>100_bases CATACGGAAACAAGAAAAGAGTTGAATAATCTTTTTCTATCTGGTAAAATAGGGATTACAAAGACGTTAAATTCAAAGGC TATTTATATAAAGGAGTGAT
Downstream 100 bases:
>100_bases GTACGGGGACGGTGAAAGTTTCGCTAAAAAGTTCAATCCTTCATTACAGGTTGTATGTGCTCAAAATGTGGAACGTTCGT TCAAAGGTAATGCGCCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MDKGFIMLSRKFFSNEMWEAARTFSECEAWLDLIQSARFDATRLTASIGGREITYGRGQYPASVRFLSKRWRWGEQKVRS FIEKLIKKGMVTTDNSQGMTVITLVKYDDYNINNTANNTQDNTSNVLDYNRIKEFVTQVVTQQITQLQHSDNTKKNKENK EKNIGDSDESLVCGTSQPHTEHIDYSELVKFFNEETKGVFGTVRTPLSDSRKGMINARIKSYGKKTFADMIRKAYQSDFL KGQNKKGWTASFDWLIKPTNFEKVISGNYDNKNSRNDPAIPNRAKSREEQTDREILEYAAKAFGKGMVSSK
Sequences:
>Translated_311_residues MDKGFIMLSRKFFSNEMWEAARTFSECEAWLDLIQSARFDATRLTASIGGREITYGRGQYPASVRFLSKRWRWGEQKVRS FIEKLIKKGMVTTDNSQGMTVITLVKYDDYNINNTANNTQDNTSNVLDYNRIKEFVTQVVTQQITQLQHSDNTKKNKENK EKNIGDSDESLVCGTSQPHTEHIDYSELVKFFNEETKGVFGTVRTPLSDSRKGMINARIKSYGKKTFADMIRKAYQSDFL KGQNKKGWTASFDWLIKPTNFEKVISGNYDNKNSRNDPAIPNRAKSREEQTDREILEYAAKAFGKGMVSSK >Mature_311_residues MDKGFIMLSRKFFSNEMWEAARTFSECEAWLDLIQSARFDATRLTASIGGREITYGRGQYPASVRFLSKRWRWGEQKVRS FIEKLIKKGMVTTDNSQGMTVITLVKYDDYNINNTANNTQDNTSNVLDYNRIKEFVTQVVTQQITQLQHSDNTKKNKENK EKNIGDSDESLVCGTSQPHTEHIDYSELVKFFNEETKGVFGTVRTPLSDSRKGMINARIKSYGKKTFADMIRKAYQSDFL KGQNKKGWTASFDWLIKPTNFEKVISGNYDNKNSRNDPAIPNRAKSREEQTDREILEYAAKAFGKGMVSSK
Specific function: Unknown
COG id: COG3935
COG function: function code L; Putative primosome component and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35731; Mature: 35731
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKGFIMLSRKFFSNEMWEAARTFSECEAWLDLIQSARFDATRLTASIGGREITYGRGQY CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCC PASVRFLSKRWRWGEQKVRSFIEKLIKKGMVTTDNSQGMTVITLVKYDDYNINNTANNTQ CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCC DNTSNVLDYNRIKEFVTQVVTQQITQLQHSDNTKKNKENKEKNIGDSDESLVCGTSQPHT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC EHIDYSELVKFFNEETKGVFGTVRTPLSDSRKGMINARIKSYGKKTFADMIRKAYQSDFL CCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KGQNKKGWTASFDWLIKPTNFEKVISGNYDNKNSRNDPAIPNRAKSREEQTDREILEYAA CCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAFGKGMVSSK HHHCCCCCCCC >Mature Secondary Structure MDKGFIMLSRKFFSNEMWEAARTFSECEAWLDLIQSARFDATRLTASIGGREITYGRGQY CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCC PASVRFLSKRWRWGEQKVRSFIEKLIKKGMVTTDNSQGMTVITLVKYDDYNINNTANNTQ CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCC DNTSNVLDYNRIKEFVTQVVTQQITQLQHSDNTKKNKENKEKNIGDSDESLVCGTSQPHT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC EHIDYSELVKFFNEETKGVFGTVRTPLSDSRKGMINARIKSYGKKTFADMIRKAYQSDFL CCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KGQNKKGWTASFDWLIKPTNFEKVISGNYDNKNSRNDPAIPNRAKSREEQTDREILEYAA CCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAFGKGMVSSK HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA