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The map label for this gene is atpD [H]

Identifier: 150007478

GI number: 150007478

Start: 978134

End: 978757

Strand: Direct

Name: atpD [H]

Synonym: BDI_0829

Alternate gene names: 150007478

Gene position: 978134-978757 (Clockwise)

Preceding gene: 150007477

Following gene: 150007479

Centisome position: 20.33

GC content: 47.76

Gene sequence:

>624_bases
ATGGCAATAAAGTTTCAATATAATAAAACCTCTCTTCAGCAATTGGAAAAGCAACTGAAGATGCGTGAACGCTCCCTGCC
TACGATCAAGAGCAAGGAGAGCGCCCTGCGTATCGAGGTGAAGCGGACCAAGGACGAAGTGAATAAATTGGAACTTCAGC
TAGAACGAGAGATTCAGAGTTACGAGAATATGGTGGCTTTGTGGAACGAGTTCAATCCGGAGCTGATCTCCGTGAAGGAC
GTGACGCTTTCCACGAAGAAGATCGCCGGCGTGATCGTCCCGTTATTGGACGAGATCAAGTTCGAGATCGGACACTATAG
TCTCTTTAATGCCCCCGCATGGTATACAGATGGTATCGAGTTGCTGAAAAAGCTGGCTCGTACCGGTATCGAGGCGGAGT
TCTCGGGCATGAAGCTGGAGTTGTTGGAGCATGCTAGGAAAAAGACCACTCAGAAGGTGAACCTGTTTGAGAAGGTACAG
ATTCCGGGTTATAAGGATGCGATCCGTAAGGTGAAACGGTTTATGGAAGACGAGGAGAGTCTTTCTAAGTCCTCACAGAA
GATCATGAGAGCCAATCAGGAGAAACGTAAGGCAAAAGAAGAAAAAGAGGAGGCCGAGGTATGA

Upstream 100 bases:

>100_bases
TGGACGTAGCTTGGGGATTGTTCGCTAGATATTTCAGCCCGGAGGAGGTAAATATCAAACAAGGATTGGTTGATAAGTAC
TGGAAGTAAATTAAATAAAC

Downstream 100 bases:

>100_bases
TAGTAAAGATGAGTAAATATGCCTTTATGGTGTTCCATAAGGAGTATGATACGTTCCTTTCTACGCTTCGTGACTTAGGT
GTCGTCCATATCAAGGAGAC

Product: V-type ATP synthase subunit D

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit D [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAIKFQYNKTSLQQLEKQLKMRERSLPTIKSKESALRIEVKRTKDEVNKLELQLEREIQSYENMVALWNEFNPELISVKD
VTLSTKKIAGVIVPLLDEIKFEIGHYSLFNAPAWYTDGIELLKKLARTGIEAEFSGMKLELLEHARKKTTQKVNLFEKVQ
IPGYKDAIRKVKRFMEDEESLSKSSQKIMRANQEKRKAKEEKEEAEV

Sequences:

>Translated_207_residues
MAIKFQYNKTSLQQLEKQLKMRERSLPTIKSKESALRIEVKRTKDEVNKLELQLEREIQSYENMVALWNEFNPELISVKD
VTLSTKKIAGVIVPLLDEIKFEIGHYSLFNAPAWYTDGIELLKKLARTGIEAEFSGMKLELLEHARKKTTQKVNLFEKVQ
IPGYKDAIRKVKRFMEDEESLSKSSQKIMRANQEKRKAKEEKEEAEV
>Mature_206_residues
AIKFQYNKTSLQQLEKQLKMRERSLPTIKSKESALRIEVKRTKDEVNKLELQLEREIQSYENMVALWNEFNPELISVKDV
TLSTKKIAGVIVPLLDEIKFEIGHYSLFNAPAWYTDGIELLKKLARTGIEAEFSGMKLELLEHARKKTTQKVNLFEKVQI
PGYKDAIRKVKRFMEDEESLSKSSQKIMRANQEKRKAKEEKEEAEV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002699 [H]

Pfam domain/function: PF01813 ATP-synt_D [H]

EC number: 3.6.3.14

Molecular weight: Translated: 24191; Mature: 24060

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKFQYNKTSLQQLEKQLKMRERSLPTIKSKESALRIEVKRTKDEVNKLELQLEREIQS
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
YENMVALWNEFNPELISVKDVTLSTKKIAGVIVPLLDEIKFEIGHYSLFNAPAWYTDGIE
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH
LLKKLARTGIEAEFSGMKLELLEHARKKTTQKVNLFEKVQIPGYKDAIRKVKRFMEDEES
HHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSKSSQKIMRANQEKRKAKEEKEEAEV
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIKFQYNKTSLQQLEKQLKMRERSLPTIKSKESALRIEVKRTKDEVNKLELQLEREIQS
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
YENMVALWNEFNPELISVKDVTLSTKKIAGVIVPLLDEIKFEIGHYSLFNAPAWYTDGIE
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHH
LLKKLARTGIEAEFSGMKLELLEHARKKTTQKVNLFEKVQIPGYKDAIRKVKRFMEDEES
HHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSKSSQKIMRANQEKRKAKEEKEEAEV
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]