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The map label for this gene is udk [H]

Identifier: 150007464

GI number: 150007464

Start: 961504

End: 962133

Strand: Reverse

Name: udk [H]

Synonym: BDI_0815

Alternate gene names: 150007464

Gene position: 962133-961504 (Counterclockwise)

Preceding gene: 150007465

Following gene: 150007462

Centisome position: 20.0

GC content: 46.19

Gene sequence:

>630_bases
ATGCTAATTATAGGTATAGCGGGCGGGACTGGTTCCGGGAAAACTACGGTGGTAAAAAAGATCATAGAAAGTTTACCTCC
CGGCGAGGTCGTATTACTCCCTCAAGATTCTTATTACAAAGATAACAGTCATGTGCCGGTAGAGAAGCGTCAATACATTA
ATTTCGACCATCCCGACGCATTTGATTGGCCGCTCCTCTCTGAGCAAGTCACCTTGCTGAAAGAGGGGAAATGCATCGAG
CAGCCGACTTATTCTTATCTTACCTGCTGCCGATTGCCCGAGACCATTCATATCGAGCCTCGTGATGTTGTCATCATCGA
AGGGATCCTCGCTTTATGCGACCCTCAATTACGAGACTTGATGGACTTGAAAGTATTTGTCGATACAGATTCGGACGAAC
GTCTTATCCGTGTGATCCAACGGGATATGATCGAGAGAGGACGCACGGCGGAAGCGGTAATGGAACGCTATACCCGGGTA
CTAAAGCCTATGCACCTGCAATTTATAGAGCCTAGCAAACGATATGCCGACCTAATTATACCCGAAGGAGGAAGCAACCA
GATCGCCATCAATATATTGAAAATGTTTATCGAGAACAATCTGGGGCTTCCCCATACAGATAATCAATAA

Upstream 100 bases:

>100_bases
CTTTTTATCTCGTTTTTTCTATTAATAGCGAAATACTACCACTATAAATATTTAGTACCTTTGCATTTATAAACATAAAT
ATGGATTAATATAAGAAATC

Downstream 100 bases:

>100_bases
ACCAATCGTTCCGACAAGGATCTCCCCAATATAAATGCGTGTACCCCGCCAATACGTTCTTGTAGCGATATAGCGGGGTA
TCCGTTTGACCTCCTTTCGC

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLIIGIAGGTGSGKTTVVKKIIESLPPGEVVLLPQDSYYKDNSHVPVEKRQYINFDHPDAFDWPLLSEQVTLLKEGKCIE
QPTYSYLTCCRLPETIHIEPRDVVIIEGILALCDPQLRDLMDLKVFVDTDSDERLIRVIQRDMIERGRTAEAVMERYTRV
LKPMHLQFIEPSKRYADLIIPEGGSNQIAINILKMFIENNLGLPHTDNQ

Sequences:

>Translated_209_residues
MLIIGIAGGTGSGKTTVVKKIIESLPPGEVVLLPQDSYYKDNSHVPVEKRQYINFDHPDAFDWPLLSEQVTLLKEGKCIE
QPTYSYLTCCRLPETIHIEPRDVVIIEGILALCDPQLRDLMDLKVFVDTDSDERLIRVIQRDMIERGRTAEAVMERYTRV
LKPMHLQFIEPSKRYADLIIPEGGSNQIAINILKMFIENNLGLPHTDNQ
>Mature_209_residues
MLIIGIAGGTGSGKTTVVKKIIESLPPGEVVLLPQDSYYKDNSHVPVEKRQYINFDHPDAFDWPLLSEQVTLLKEGKCIE
QPTYSYLTCCRLPETIHIEPRDVVIIEGILALCDPQLRDLMDLKVFVDTDSDERLIRVIQRDMIERGRTAEAVMERYTRV
LKPMHLQFIEPSKRYADLIIPEGGSNQIAINILKMFIENNLGLPHTDNQ

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI13899253, Length=210, Percent_Identity=45.2380952380952, Blast_Score=172, Evalue=2e-43,
Organism=Homo sapiens, GI301129207, Length=202, Percent_Identity=42.0792079207921, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI57863312, Length=202, Percent_Identity=42.0792079207921, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI18699734, Length=210, Percent_Identity=41.9047619047619, Blast_Score=170, Evalue=6e-43,
Organism=Homo sapiens, GI209863022, Length=146, Percent_Identity=47.2602739726027, Blast_Score=122, Evalue=2e-28,
Organism=Escherichia coli, GI87082034, Length=202, Percent_Identity=47.5247524752475, Blast_Score=197, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17539894, Length=194, Percent_Identity=43.8144329896907, Blast_Score=165, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17539892, Length=194, Percent_Identity=43.8144329896907, Blast_Score=165, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI71981181, Length=202, Percent_Identity=35.1485148514851, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6324339, Length=199, Percent_Identity=35.678391959799, Blast_Score=119, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320223, Length=88, Percent_Identity=36.3636363636364, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573516, Length=205, Percent_Identity=42.9268292682927, Blast_Score=169, Evalue=8e-43,
Organism=Drosophila melanogaster, GI28573514, Length=205, Percent_Identity=42.9268292682927, Blast_Score=169, Evalue=8e-43,
Organism=Drosophila melanogaster, GI28573512, Length=205, Percent_Identity=42.9268292682927, Blast_Score=169, Evalue=8e-43,
Organism=Drosophila melanogaster, GI45550449, Length=205, Percent_Identity=42.9268292682927, Blast_Score=169, Evalue=1e-42,
Organism=Drosophila melanogaster, GI221458995, Length=212, Percent_Identity=41.9811320754717, Blast_Score=163, Evalue=8e-41,
Organism=Drosophila melanogaster, GI24649624, Length=204, Percent_Identity=42.6470588235294, Blast_Score=163, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 23801; Mature: 23801

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIIGIAGGTGSGKTTVVKKIIESLPPGEVVLLPQDSYYKDNSHVPVEKRQYINFDHPDA
CEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHEECCCCCCC
FDWPLLSEQVTLLKEGKCIEQPTYSYLTCCRLPETIHIEPRDVVIIEGILALCDPQLRDL
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCEEEEEHHHHHCCHHHHHH
MDLKVFVDTDSDERLIRVIQRDMIERGRTAEAVMERYTRVLKPMHLQFIEPSKRYADLII
HEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEEECCCCCCEEEEE
PEGGSNQIAINILKMFIENNLGLPHTDNQ
ECCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLIIGIAGGTGSGKTTVVKKIIESLPPGEVVLLPQDSYYKDNSHVPVEKRQYINFDHPDA
CEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHEECCCCCCC
FDWPLLSEQVTLLKEGKCIEQPTYSYLTCCRLPETIHIEPRDVVIIEGILALCDPQLRDL
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCEEEEEHHHHHCCHHHHHH
MDLKVFVDTDSDERLIRVIQRDMIERGRTAEAVMERYTRVLKPMHLQFIEPSKRYADLII
HEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEEECCCCCCEEEEE
PEGGSNQIAINILKMFIENNLGLPHTDNQ
ECCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]