| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150007355
Identifier: 150007355
GI number: 150007355
Start: 837119
End: 838159
Strand: Reverse
Name: 150007355
Synonym: BDI_0706
Alternate gene names: NA
Gene position: 838159-837119 (Counterclockwise)
Preceding gene: 150007359
Following gene: 150007354
Centisome position: 17.42
GC content: 45.53
Gene sequence:
>1041_bases ATGAGAAGAATTTCATACATCCTGCTTCTGGGCATCCTTTTATCGGCATGCCAAAAGAACACAAAGTCCGAAGGCACGAA CTTACCTGTCGAGGTGATCTCTCCAATAAAAAAGACAGAGATCGGCAGAAGTCGTGAATACACCTTTTTATCAAGGCCCT ACAATGAGACGGTCCTATCTTTCCGCATCAATGGCCCCGTCTTAAATTTCGACTTACGGCCCGGACAAGCGTTCTCCAAA GACAGCACGATCCTCTCGATCGATAACCGTGACTTCTTGATTCGCAAGCAGCAAACAGAGGCGCTCTACTCGCAAACCAA CCAAGAGTATAAACGGATCGAGGCCCTTTACAAAAAGAATAACATCTCCGGAAGTAATTATGAGAAGGCAAAAGCGGATT TCCTTGTCGCCAAATCCAATTACGAGACCGCCGTCAACGCCCTAAGCGATACCCATCTGAGCGCCCCTTACGACGGGTAT ATCCAAAATATCCATATCGAACCTTTCCAAGACGTGAAAGCGACCGAGCCAATCCTTACCTTCATAGAACTGGACAGGCT CAAGATCGAGACCTATATACCAGAGGAAGTCGCCTTACACTTATATGATAAAGAAAAACAGAAGCTATGTCAAATAGGAA TCCATTTCGATACGGCTCCCGAACGGACAATCACCCCTTCCGATTTATATGTGTCTAAAAGTACGACAAACAATAACCTC TCTTATCTGCTGACCGCCATTGTCCCAAATCCAGATATGGAATGGCTGGGCGGAATGAGTGGAATCCTCTCGATCGACCT ACCCAAAGAAGAGCGGTCTCAAAATCTATGGCTTCCCTTAACGGCTATCTGTCATCGCCCCCAAAAAGGAGATTATGTAT GGGTGGTTAAAGGAGACAAGGTTAACTCCGTTCCCGTCAAACTCGGTGAGCAAAGAAATAACCAGATAGAGATCGTGGAA GGAATCACGGAAAATGACCTTGTCGTATTGACAAGGCAACGTTTCCTTTCCGAAAATAGTACCGTAACCATCCAAAAATA A
Upstream 100 bases:
>100_bases CCAGTTGAGCGACGGTATCTTCCGATTCAGTAAAAATCCGCCTTATTCCTTCATCCATTGCCTCTATTTTTGCCCGGTAA CAAATAACTAGGTATATCTT
Downstream 100 bases:
>100_bases GTAAGATGCAAAAATTCATCAAATATTTCCTGAAAAACAAAGCGGTTACATGGCTCCTGCTAGTCCTGATCTTGGCAGGG GGACTGTTCTCTTACGCAAA
Product: multidrug efflux system protein
Products: NA
Alternate protein names: Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Multidrug Resistance Protein; Secretion Protein HlyD; Periplasmic Linker Protein; Auxiliary Transport Protein MFP Family; HlyD Family Secretion Protein; Acriflavin Resistance Periplasmic Protein; RND Efflux System Membrane Fusion Protein; Lipoprotein; RND Efflux Membrane Fusion Protein; Acriflavin Resistance Protein E; Transport/Efflux Transmembrane Protein; Component Of Multidrug Efflux System; Cation Efflux System Protein; Membrane Fusion Protein; Periplasmic Linker Protein Multidrug Resistance Protein; Acriflavin Resistance Protein; HlyD-Like Secretion Protein; AcrA/E Family Efflux Transporter MFP Subunit; Multidrug Efflux Transporter Membrane Fusion Protein; Efflux Protein; Efflux Transporter; Efflux Transporter Component; Linker Protein; Secretion Protein HlyD Family; Multidrug Efflux Transporter Protein; Secretion Protein Family Hlyd; Cation/Multidrug Efflux System Mebrane-Fusion Component; Multidrug ABC Transporter; RND Superfamily Transport Protein Membrane-Fusion Protein; Periplasmic Component Of Efflux System; Nodulation Protein; RND Family Resistance-Nodulation- Efflux Pump; Acriflavin Resistance Protein AcrE; Organic Solvent Efflux Pump; Multidrug Efflux Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRRISYILLLGILLSACQKNTKSEGTNLPVEVISPIKKTEIGRSREYTFLSRPYNETVLSFRINGPVLNFDLRPGQAFSK DSTILSIDNRDFLIRKQQTEALYSQTNQEYKRIEALYKKNNISGSNYEKAKADFLVAKSNYETAVNALSDTHLSAPYDGY IQNIHIEPFQDVKATEPILTFIELDRLKIETYIPEEVALHLYDKEKQKLCQIGIHFDTAPERTITPSDLYVSKSTTNNNL SYLLTAIVPNPDMEWLGGMSGILSIDLPKEERSQNLWLPLTAICHRPQKGDYVWVVKGDKVNSVPVKLGEQRNNQIEIVE GITENDLVVLTRQRFLSENSTVTIQK
Sequences:
>Translated_346_residues MRRISYILLLGILLSACQKNTKSEGTNLPVEVISPIKKTEIGRSREYTFLSRPYNETVLSFRINGPVLNFDLRPGQAFSK DSTILSIDNRDFLIRKQQTEALYSQTNQEYKRIEALYKKNNISGSNYEKAKADFLVAKSNYETAVNALSDTHLSAPYDGY IQNIHIEPFQDVKATEPILTFIELDRLKIETYIPEEVALHLYDKEKQKLCQIGIHFDTAPERTITPSDLYVSKSTTNNNL SYLLTAIVPNPDMEWLGGMSGILSIDLPKEERSQNLWLPLTAICHRPQKGDYVWVVKGDKVNSVPVKLGEQRNNQIEIVE GITENDLVVLTRQRFLSENSTVTIQK >Mature_346_residues MRRISYILLLGILLSACQKNTKSEGTNLPVEVISPIKKTEIGRSREYTFLSRPYNETVLSFRINGPVLNFDLRPGQAFSK DSTILSIDNRDFLIRKQQTEALYSQTNQEYKRIEALYKKNNISGSNYEKAKADFLVAKSNYETAVNALSDTHLSAPYDGY IQNIHIEPFQDVKATEPILTFIELDRLKIETYIPEEVALHLYDKEKQKLCQIGIHFDTAPERTITPSDLYVSKSTTNNNL SYLLTAIVPNPDMEWLGGMSGILSIDLPKEERSQNLWLPLTAICHRPQKGDYVWVVKGDKVNSVPVKLGEQRNNQIEIVE GITENDLVVLTRQRFLSENSTVTIQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39432; Mature: 39432
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRISYILLLGILLSACQKNTKSEGTNLPVEVISPIKKTEIGRSREYTFLSRPYNETVLS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHCCCCCCEEEEECCCCCEEEE FRINGPVLNFDLRPGQAFSKDSTILSIDNRDFLIRKQQTEALYSQTNQEYKRIEALYKKN EEECCCEEEEECCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHC NISGSNYEKAKADFLVAKSNYETAVNALSDTHLSAPYDGYIQNIHIEPFQDVKATEPILT CCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHEE FIELDRLKIETYIPEEVALHLYDKEKQKLCQIGIHFDTAPERTITPSDLYVSKSTTNNNL EEECCEEEEEEECCHHHEEEECCHHHHHHHEECEEECCCCCCCCCCCCEEEEECCCCCCE SYLLTAIVPNPDMEWLGGMSGILSIDLPKEERSQNLWLPLTAICHRPQKGDYVWVVKGDK EEEEEEECCCCCHHHHCCCCCEEEEECCHHHHCCCCEEEHHHHHCCCCCCCEEEEEECCC VNSVPVKLGEQRNNQIEIVEGITENDLVVLTRQRFLSENSTVTIQK CCCCCEEECCCCCCEEEEEECCCCCCEEEEEEHHHCCCCCEEEEEC >Mature Secondary Structure MRRISYILLLGILLSACQKNTKSEGTNLPVEVISPIKKTEIGRSREYTFLSRPYNETVLS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHCCCCCCEEEEECCCCCEEEE FRINGPVLNFDLRPGQAFSKDSTILSIDNRDFLIRKQQTEALYSQTNQEYKRIEALYKKN EEECCCEEEEECCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHC NISGSNYEKAKADFLVAKSNYETAVNALSDTHLSAPYDGYIQNIHIEPFQDVKATEPILT CCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHEE FIELDRLKIETYIPEEVALHLYDKEKQKLCQIGIHFDTAPERTITPSDLYVSKSTTNNNL EEECCEEEEEEECCHHHEEEECCHHHHHHHEECEEECCCCCCCCCCCCEEEEECCCCCCE SYLLTAIVPNPDMEWLGGMSGILSIDLPKEERSQNLWLPLTAICHRPQKGDYVWVVKGDK EEEEEEECCCCCHHHHCCCCCEEEEECCHHHHCCCCEEEHHHHHCCCCCCCEEEEEECCC VNSVPVKLGEQRNNQIEIVEGITENDLVVLTRQRFLSENSTVTIQK CCCCCEEECCCCCCEEEEEECCCCCCEEEEEEHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA