| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is bfmBB [H]
Identifier: 150007338
GI number: 150007338
Start: 818088
End: 819422
Strand: Reverse
Name: bfmBB [H]
Synonym: BDI_0688
Alternate gene names: 150007338
Gene position: 819422-818088 (Counterclockwise)
Preceding gene: 150007339
Following gene: 150007337
Centisome position: 17.03
GC content: 48.46
Gene sequence:
>1335_bases ATGGCTACATTTGAGATAAAGATGCCTAAGTTGGGCGAAAGTATTACAGAAGGAACCATCATCTCATGGTCGGTAAAGGT AGGTGATACCGTAGAGGAAGATGATGTCCTTTTCGAAGTAAGCACAGCGAAAGTAAGCGCTGAGATTCCATCCCCCGTTG AGGGAAAAGTAAAACAACTTCTTTTTAATGAGGGAGACACCGTAGCGGTCGGTACAGTCGTAGCGATCCTTGAGATCGAA GGTGAAGGAGAGGATAACGGAGCTCAGCCGGAAACCTCGGAGGCTACTCAACCGAAAGAACAAGTCACCGCTCCCGCCTC AGAGGAATTATCAAAGAATTCCCAAGAGGAAGATCGTTGGTATTCTCCCGTCGTATTGCAATTAGCGAAAACGGCCGGTG TATCGCAAGATGAACTGGATCATATTCCGGGTACCGGATACCTAGGACGTCTCAGCAAGAAAGATATTCAAACGTATATC GATCACAAAAATAAAGGTACGGAAATGCCGAAGCCGAAACAGGCTCCTGTTTCTTCCATGCAGCAAACGGCTACGAGCAC GCCAACAATTACGGTAGCGCCGCCGACCGCTCCTTCCATGCCTATGACAGCGGCCACTCCATCCGCTCCACTCGCCCAAG GAGACGAGGTGAGAGAAATGGATCGTGTACGTAAGATCATTGCGGACCATATGGTATTATCGAAAAAAGTATCTCCGCAT GTGACGTCGGTTATCGAGGTAGACGTGACCCGACTGGTTAACTGGCGTAAAAAAGTGAAGGATCAATTCTTCAAGCAAGA AGGCATCAACCTAACTTATATGCCGGCTATTACCGAAGCGACCGCCAAAGCGTTGAAAGCCTATCCATTAGTAAATTCAT CCGTGGACGGTTACAATATCATCCTAAAGAAGCCTATTAATATAGGTATAGCGGTTTCCTTAAACGACGGAAATTTAATT GTCCCGGTTATACACGATGCCGATAAGCTGAACCTAAGTGGCCTCGCCTCACAAATAGATACCTTGGCGGCTAAAGCCCG TGAGAATAAGCTCGCCCCGGATAGCATCCAAGGCGGAACGTTCACGATTACGAATTTCGGAACCTTCAAGAGTCTGTTCG GCACCCCGATCATCAATCAGCCTCAAGTAGCGATCCTAGCCGTCGGTTATATCGAGAAGAAGCCTGCGGTAGTAGAGACG CCCGAGGGAGACACGATCGCTATCCGTCACAAGATGTACCTCTCACTCTCCTACGATCATCGTATCGTGGACGGAGCTTT GGCGGGAGCCTTTTTACGTTCCATCGCCGACGAACTAGAGAATTGGAACGCTTAA
Upstream 100 bases:
>100_bases AGAAACTTACCTTCTTGATCTTTGTTCTTATTATATACCGTTTGTAGAGACGGGGCACGCCCCGTCTCCCACTATATAAC AGTAATTAAAAAATCAAAAT
Downstream 100 bases:
>100_bases TACATTATTATAATAGAACAACATGAAAAAGTATGATATAAAAACAACAGATAAGGAGACTCTCAGGAAATGGTTTTACC TTATGACGCTCGGAAGGGCG
Product: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase complex component E2; BCKAD-E2; BCKADE2; Dihydrolipoamide acetyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; Dihydrolipoamide branched chain transacylase; Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MATFEIKMPKLGESITEGTIISWSVKVGDTVEEDDVLFEVSTAKVSAEIPSPVEGKVKQLLFNEGDTVAVGTVVAILEIE GEGEDNGAQPETSEATQPKEQVTAPASEELSKNSQEEDRWYSPVVLQLAKTAGVSQDELDHIPGTGYLGRLSKKDIQTYI DHKNKGTEMPKPKQAPVSSMQQTATSTPTITVAPPTAPSMPMTAATPSAPLAQGDEVREMDRVRKIIADHMVLSKKVSPH VTSVIEVDVTRLVNWRKKVKDQFFKQEGINLTYMPAITEATAKALKAYPLVNSSVDGYNIILKKPINIGIAVSLNDGNLI VPVIHDADKLNLSGLASQIDTLAAKARENKLAPDSIQGGTFTITNFGTFKSLFGTPIINQPQVAILAVGYIEKKPAVVET PEGDTIAIRHKMYLSLSYDHRIVDGALAGAFLRSIADELENWNA
Sequences:
>Translated_444_residues MATFEIKMPKLGESITEGTIISWSVKVGDTVEEDDVLFEVSTAKVSAEIPSPVEGKVKQLLFNEGDTVAVGTVVAILEIE GEGEDNGAQPETSEATQPKEQVTAPASEELSKNSQEEDRWYSPVVLQLAKTAGVSQDELDHIPGTGYLGRLSKKDIQTYI DHKNKGTEMPKPKQAPVSSMQQTATSTPTITVAPPTAPSMPMTAATPSAPLAQGDEVREMDRVRKIIADHMVLSKKVSPH VTSVIEVDVTRLVNWRKKVKDQFFKQEGINLTYMPAITEATAKALKAYPLVNSSVDGYNIILKKPINIGIAVSLNDGNLI VPVIHDADKLNLSGLASQIDTLAAKARENKLAPDSIQGGTFTITNFGTFKSLFGTPIINQPQVAILAVGYIEKKPAVVET PEGDTIAIRHKMYLSLSYDHRIVDGALAGAFLRSIADELENWNA >Mature_443_residues ATFEIKMPKLGESITEGTIISWSVKVGDTVEEDDVLFEVSTAKVSAEIPSPVEGKVKQLLFNEGDTVAVGTVVAILEIEG EGEDNGAQPETSEATQPKEQVTAPASEELSKNSQEEDRWYSPVVLQLAKTAGVSQDELDHIPGTGYLGRLSKKDIQTYID HKNKGTEMPKPKQAPVSSMQQTATSTPTITVAPPTAPSMPMTAATPSAPLAQGDEVREMDRVRKIIADHMVLSKKVSPHV TSVIEVDVTRLVNWRKKVKDQFFKQEGINLTYMPAITEATAKALKAYPLVNSSVDGYNIILKKPINIGIAVSLNDGNLIV PVIHDADKLNLSGLASQIDTLAAKARENKLAPDSIQGGTFTITNFGTFKSLFGTPIINQPQVAILAVGYIEKKPAVVETP EGDTIAIRHKMYLSLSYDHRIVDGALAGAFLRSIADELENWNA
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG0508
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI19923748, Length=254, Percent_Identity=37.4015748031496, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI110671329, Length=443, Percent_Identity=29.7968397291196, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI31711992, Length=459, Percent_Identity=28.1045751633987, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI203098753, Length=465, Percent_Identity=28.8172043010753, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI203098816, Length=465, Percent_Identity=28.3870967741935, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI260898739, Length=154, Percent_Identity=38.3116883116883, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1786946, Length=443, Percent_Identity=32.0541760722348, Blast_Score=212, Evalue=3e-56, Organism=Escherichia coli, GI1786305, Length=449, Percent_Identity=31.6258351893096, Blast_Score=173, Evalue=2e-44, Organism=Caenorhabditis elegans, GI25146366, Length=439, Percent_Identity=31.4350797266515, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17537937, Length=439, Percent_Identity=28.7015945330296, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17560088, Length=455, Percent_Identity=28.7912087912088, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17538894, Length=223, Percent_Identity=30.4932735426009, Blast_Score=96, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320352, Length=441, Percent_Identity=31.9727891156463, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6324258, Length=227, Percent_Identity=29.0748898678414, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24645909, Length=223, Percent_Identity=38.5650224215247, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI18859875, Length=445, Percent_Identity=29.438202247191, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24582497, Length=220, Percent_Identity=33.1818181818182, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI20129315, Length=220, Percent_Identity=33.1818181818182, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3096 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR001078 - InterPro: IPR000089 - InterPro: IPR023213 - InterPro: IPR004167 - InterPro: IPR011053 [H]
Pfam domain/function: PF00198 2-oxoacid_dh; PF00364 Biotin_lipoyl; PF02817 E3_binding [H]
EC number: =2.3.1.168 [H]
Molecular weight: Translated: 48012; Mature: 47881
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFEIKMPKLGESITEGTIISWSVKVGDTVEEDDVLFEVSTAKVSAEIPSPVEGKVKQL CCEEEEECCHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHH LFNEGDTVAVGTVVAILEIEGEGEDNGAQPETSEATQPKEQVTAPASEELSKNSQEEDRW HHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHH YSPVVLQLAKTAGVSQDELDHIPGTGYLGRLSKKDIQTYIDHKNKGTEMPKPKQAPVSSM CCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH QQTATSTPTITVAPPTAPSMPMTAATPSAPLAQGDEVREMDRVRKIIADHMVLSKKVSPH HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH VTSVIEVDVTRLVNWRKKVKDQFFKQEGINLTYMPAITEATAKALKAYPLVNSSVDGYNI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEE ILKKPINIGIAVSLNDGNLIVPVIHDADKLNLSGLASQIDTLAAKARENKLAPDSIQGGT EEECCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE FTITNFGTFKSLFGTPIINQPQVAILAVGYIEKKPAVVETPEGDTIAIRHKMYLSLSYDH EEEECCCHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEEEEEECCC RIVDGALAGAFLRSIADELENWNA CHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATFEIKMPKLGESITEGTIISWSVKVGDTVEEDDVLFEVSTAKVSAEIPSPVEGKVKQL CEEEEECCHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHH LFNEGDTVAVGTVVAILEIEGEGEDNGAQPETSEATQPKEQVTAPASEELSKNSQEEDRW HHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHH YSPVVLQLAKTAGVSQDELDHIPGTGYLGRLSKKDIQTYIDHKNKGTEMPKPKQAPVSSM CCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH QQTATSTPTITVAPPTAPSMPMTAATPSAPLAQGDEVREMDRVRKIIADHMVLSKKVSPH HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH VTSVIEVDVTRLVNWRKKVKDQFFKQEGINLTYMPAITEATAKALKAYPLVNSSVDGYNI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEE ILKKPINIGIAVSLNDGNLIVPVIHDADKLNLSGLASQIDTLAAKARENKLAPDSIQGGT EEECCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE FTITNFGTFKSLFGTPIINQPQVAILAVGYIEKKPAVVETPEGDTIAIRHKMYLSLSYDH EEEECCCHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEEEEEECCC RIVDGALAGAFLRSIADELENWNA CHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377; 7961792 [H]