| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007206
Identifier: 150007206
GI number: 150007206
Start: 650831
End: 651277
Strand: Reverse
Name: 150007206
Synonym: BDI_0551
Alternate gene names: NA
Gene position: 651277-650831 (Counterclockwise)
Preceding gene: 150007207
Following gene: 150007200
Centisome position: 13.54
GC content: 54.36
Gene sequence:
>447_bases ATGGGTAAGGTTTATTGTTTCTACCAGAATTACAGGGAGGTCAGCCTCCTTGTAATTCATTGCTCGGCCACACGATATGA CAGGGATTTTCCTGTGGAGGCGCTCCGTTCATCGCACAAGGCACGGGGATTCGCCGATATCGGCTATCATTTCTATATCA CACGGGACGGGGAGCTACATCGTTGCCGACCGGTCAACCAGATCGGGGCGCACGCAGCCGGATGGAACGACAAAAGTATC GGTATATGTTACGAGGGAGGACTCGACGAACAAGGCCGTCCGGCCGATACCCGGACCTACGCCCAGCGCTGTACCTTGAT GGATCTGCTACGGCAATTACGAAGGGATTACCCGGAGGCACGCATCCTAGGACATTACCAACTTAGCCCCTATATCCGTA AGGCTTGCCCCTGCTTTGACGCAAGGGAGGAATACGGGGAGATCTAG
Upstream 100 bases:
>100_bases ATGGAGTACTATTATCAAAGTGATCATCGCCGTAGCTACCGCCATCGCGGGAGCACTTGGCATCCAATCCTGTATTCTCT AATTTTCAATTTCAATTATC
Downstream 100 bases:
>100_bases CATTAGAATTTCTTACCGAACGCTATATTCAAGAAGGTCTTCACCAATATCTTGAAATCGAACAGCCAAGAGCGATGTTC CAGATAGAACAGGTCGTAAC
Product: putative N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYGEI
Sequences:
>Translated_148_residues MGKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYGEI >Mature_147_residues GKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSIG ICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYGEI
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002502 - InterPro: IPR018247 - InterPro: IPR015510 [H]
Pfam domain/function: PF01510 Amidase_2 [H]
EC number: NA
Molecular weight: Translated: 17205; Mature: 17073
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH CCCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RILGHYQLSPYIRKACPCFDAREEYGEI EEEEEEECCHHHHHHCCCCCCHHHHCCC >Mature Secondary Structure GKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH CCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC RILGHYQLSPYIRKACPCFDAREEYGEI EEEEEEECCHHHHHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]