| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150007144
Identifier: 150007144
GI number: 150007144
Start: 565431
End: 566099
Strand: Reverse
Name: 150007144
Synonym: BDI_0489
Alternate gene names: NA
Gene position: 566099-565431 (Counterclockwise)
Preceding gene: 150007148
Following gene: 150007142
Centisome position: 11.77
GC content: 45.59
Gene sequence:
>669_bases ATGAAACATTTTCTTTTAGCCATGGCTACTTTATGGTGTGTGGCAAGTACATTCTCCTCATTCGCGGCGGATAACAATAA ATGGAAGCCTCTCTTCGGTAAAAATCTGGAAAACGCCAACTACAATCCGGAAGTTTGGAGCGAGACTGATGGCGTGTTAG GTGCCGTGAAGGACGAGTCTATCTGGACAAAGGATGAATATGAGAACTTCGAGCTGGATCTTGATTTTAAGACCGACGTG GGCACGAACAGCGGAGTAGTCGTTTACTGTACGGACACGAAGGATTGGATACCCAACTCGGTAGAAATACAGATAGCGGA CGACCATTGTGAAAAATGGGGAAACGGCAAGCCGTATGAGAAATGCGGAGCCATTTACGGACATCTAGGCGCCGTGCAAG ACAAGGTAGTCAAAAAACCCGGAGAGTGGAATCATATGCGTATCAAATGCGCCGGACAACATATCATGGTTATCCTCAAT GGAAAGAAAGTTACCGAAATGGATATGAGCAAATGGACTTCCGGCACCAAGAACCCGGATGGAAGCGATATCCCAAGTTG GTTGCCCAAACCTTTCGCCGAATTACCGACCAAAGGATTTATCGGATTACAAGGAAAACATGGAGATTCATTAATCTGGT TCCGTAATATCAAGATTCGGAGTCTTTGA
Upstream 100 bases:
>100_bases ATTTCGCTTTCACTTGTAAATAAAATCGTTCTTCGTAGACTATGTTCCTTCCAAAATAAATGAATACATTTGCCTCACGT AAATCTTTAAAACTAATAGC
Downstream 100 bases:
>100_bases TAGACCTATTATATAATGTACGTGAGGGGCCATAAACAGCCCCTCATCTATTTAAAAGACTCTCGTCCCTTTTCCTTGGT GAATCTCCGAGGCTTGCGTA
Product: putative secreted glycosylhydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKHFLLAMATLWCVASTFSSFAADNNKWKPLFGKNLENANYNPEVWSETDGVLGAVKDESIWTKDEYENFELDLDFKTDV GTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAGQHIMVILN GKKVTEMDMSKWTSGTKNPDGSDIPSWLPKPFAELPTKGFIGLQGKHGDSLIWFRNIKIRSL
Sequences:
>Translated_222_residues MKHFLLAMATLWCVASTFSSFAADNNKWKPLFGKNLENANYNPEVWSETDGVLGAVKDESIWTKDEYENFELDLDFKTDV GTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAGQHIMVILN GKKVTEMDMSKWTSGTKNPDGSDIPSWLPKPFAELPTKGFIGLQGKHGDSLIWFRNIKIRSL >Mature_222_residues MKHFLLAMATLWCVASTFSSFAADNNKWKPLFGKNLENANYNPEVWSETDGVLGAVKDESIWTKDEYENFELDLDFKTDV GTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYEKCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAGQHIMVILN GKKVTEMDMSKWTSGTKNPDGSDIPSWLPKPFAELPTKGFIGLQGKHGDSLIWFRNIKIRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25003; Mature: 25003
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFLLAMATLWCVASTFSSFAADNNKWKPLFGKNLENANYNPEVWSETDGVLGAVKDES CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC IWTKDEYENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYE CCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEECHHHHHCCCCCCHH KCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAGQHIMVILNGKKVTEMDMSKWTSGTKNPD HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEEEHHHHHHCCCCCCCC GSDIPSWLPKPFAELPTKGFIGLQGKHGDSLIWFRNIKIRSL CCCCCCCCCCCHHHCCCCCEEEECCCCCCEEEEEEEEEEECC >Mature Secondary Structure MKHFLLAMATLWCVASTFSSFAADNNKWKPLFGKNLENANYNPEVWSETDGVLGAVKDES CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC IWTKDEYENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGKPYE CCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEECHHHHHCCCCCCHH KCGAIYGHLGAVQDKVVKKPGEWNHMRIKCAGQHIMVILNGKKVTEMDMSKWTSGTKNPD HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEEEHHHHHHCCCCCCCC GSDIPSWLPKPFAELPTKGFIGLQGKHGDSLIWFRNIKIRSL CCCCCCCCCCCHHHCCCCCEEEECCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA