| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150007126
Identifier: 150007126
GI number: 150007126
Start: 542688
End: 543539
Strand: Reverse
Name: 150007126
Synonym: BDI_0470
Alternate gene names: NA
Gene position: 543539-542688 (Counterclockwise)
Preceding gene: 150007127
Following gene: 150007125
Centisome position: 11.3
GC content: 46.71
Gene sequence:
>852_bases ATGAGAACGCATTTACGCGAAAGCATGCTGGCGCTTCTTTTGATAGGTATCTTAGCCACGGGTTGCGATACCGGAACGAA GAAGGCTTCCGAAAACAGTATCACGTTTGATTCTATCAGCGTGGAAAAGACTTACCATTTGTTAGATAATCCGGATAATC CCAATTGCAATCTAGAGATCAAGTTCGTTTATCCCCGGAAATATTCGGATAAAGAGGTTCTTAAGAATCTACAGAGACAG TTCGTCTCCTCTTATTTCGGCGAGAATTATGAGCAATTATCCCCCGAGGAGGCGGTACGGAAATATACCGACGACTATCT GGCCGCTTATAAGGATCTGGAAGAGGATTACAAGGCTGAGGTGGCGAAATCCGACGAGACACCGGTGGGCTCTTGGTTCT CTTACTATGAGATGTCGTCGGATGATATCGCCTTCAACCAAGACGATATCATCAGCTATACGGTAAGCTTCGAGAACTAT ACGGGCGGAGCGCATGGCGCACATTCCTACAATAACCATGTAGTGAACCTCAAGACCGGTAAGCCGATCACCGAGGAGGA GATATTCGTGGACAACTATCAAGACAATCTGGCGCGAATATTGGTAGATCAGATCGCCAAGCAAAACAACGTATCCGACG CCAAGGAACTGGAAAATATCGGTTTCTTTAGCGTGGACGAGATCTTCCCGAACGGCAACTTCCTCGTAGACGAGACGGGT ATCACCTATTCTTTCAACGAATATGAGATAGCGGCATACGTGGTAGGCGTCACGAACGTCCATCTCCCTTACAAGGAAAT CCGCTATTTGCTGCGGGATGACAGCCCGATAAGTCAGTTAATTGAAAATTGA
Upstream 100 bases:
>100_bases ACCGAGGAAAGATTGTCCTCTTATTAAACTTCATCGTGCAATTTGATTATACAATTTAATAACGTACATTCGCGTACAAA TAAATTAAATCTGTAGTCCG
Downstream 100 bases:
>100_bases GAATTGAAAATTAATGATAGATAAACCTATAAACAGATGTCCTATGGAACAAAATACAGAGAAATTCTCAATTCCCAATT CTCAATTTTCAATTCTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRTHLRESMLALLLIGILATGCDTGTKKASENSITFDSISVEKTYHLLDNPDNPNCNLEIKFVYPRKYSDKEVLKNLQRQ FVSSYFGENYEQLSPEEAVRKYTDDYLAAYKDLEEDYKAEVAKSDETPVGSWFSYYEMSSDDIAFNQDDIISYTVSFENY TGGAHGAHSYNNHVVNLKTGKPITEEEIFVDNYQDNLARILVDQIAKQNNVSDAKELENIGFFSVDEIFPNGNFLVDETG ITYSFNEYEIAAYVVGVTNVHLPYKEIRYLLRDDSPISQLIEN
Sequences:
>Translated_283_residues MRTHLRESMLALLLIGILATGCDTGTKKASENSITFDSISVEKTYHLLDNPDNPNCNLEIKFVYPRKYSDKEVLKNLQRQ FVSSYFGENYEQLSPEEAVRKYTDDYLAAYKDLEEDYKAEVAKSDETPVGSWFSYYEMSSDDIAFNQDDIISYTVSFENY TGGAHGAHSYNNHVVNLKTGKPITEEEIFVDNYQDNLARILVDQIAKQNNVSDAKELENIGFFSVDEIFPNGNFLVDETG ITYSFNEYEIAAYVVGVTNVHLPYKEIRYLLRDDSPISQLIEN >Mature_283_residues MRTHLRESMLALLLIGILATGCDTGTKKASENSITFDSISVEKTYHLLDNPDNPNCNLEIKFVYPRKYSDKEVLKNLQRQ FVSSYFGENYEQLSPEEAVRKYTDDYLAAYKDLEEDYKAEVAKSDETPVGSWFSYYEMSSDDIAFNQDDIISYTVSFENY TGGAHGAHSYNNHVVNLKTGKPITEEEIFVDNYQDNLARILVDQIAKQNNVSDAKELENIGFFSVDEIFPNGNFLVDETG ITYSFNEYEIAAYVVGVTNVHLPYKEIRYLLRDDSPISQLIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32350; Mature: 32350
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTHLRESMLALLLIGILATGCDTGTKKASENSITFDSISVEKTYHLLDNPDNPNCNLEI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCEEE KFVYPRKYSDKEVLKNLQRQFVSSYFGENYEQLSPEEAVRKYTDDYLAAYKDLEEDYKAE EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAKSDETPVGSWFSYYEMSSDDIAFNQDDIISYTVSFENYTGGAHGAHSYNNHVVNLKTG HHCCCCCCCCCHHHHHCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECC KPITEEEIFVDNYQDNLARILVDQIAKQNNVSDAKELENIGFFSVDEIFPNGNFLVDETG CCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEHHHCCCCCCEEEECCC ITYSFNEYEIAAYVVGVTNVHLPYKEIRYLLRDDSPISQLIEN CEEEECCEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure MRTHLRESMLALLLIGILATGCDTGTKKASENSITFDSISVEKTYHLLDNPDNPNCNLEI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCEEE KFVYPRKYSDKEVLKNLQRQFVSSYFGENYEQLSPEEAVRKYTDDYLAAYKDLEEDYKAE EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAKSDETPVGSWFSYYEMSSDDIAFNQDDIISYTVSFENYTGGAHGAHSYNNHVVNLKTG HHCCCCCCCCCHHHHHCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECC KPITEEEIFVDNYQDNLARILVDQIAKQNNVSDAKELENIGFFSVDEIFPNGNFLVDETG CCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEHHHCCCCCCEEEECCC ITYSFNEYEIAAYVVGVTNVHLPYKEIRYLLRDDSPISQLIEN CEEEECCEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA