Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150006970

Identifier: 150006970

GI number: 150006970

Start: 342432

End: 342878

Strand: Reverse

Name: 150006970

Synonym: BDI_0306

Alternate gene names: NA

Gene position: 342878-342432 (Counterclockwise)

Preceding gene: 150006971

Following gene: 150006969

Centisome position: 7.13

GC content: 46.53

Gene sequence:

>447_bases
ATGAGAATCAAAAAAATAGAAAGACTTATCGTAAAGTATCACGAACAGATAGTCGGGACGCTTTCGCTCACTCCCGACAA
CAAACAGTGTGCCTTTGAATACGATAAAGCATGGCTTTCCAACGGTTTCAGTATATCCCCATTGGAACTTCCGCTGAAAC
CGGGATTATTCATCGCAAAGCCCTCACCTTTTTATGGGAATTTCGGTGTTTTCGAAGACAGTCTGCCCGATGGCTATGGT
CGCTACCTCTTGCATAAGGCCTTGCTCAAAGAAGGCATCAACGATACCCAATTGTCAGCGCTCGACCGTCTAAGTCTAGT
GGGAAATGGGGGTATGGGAGCACTCACATACGAACCGGAAACCAGCATAGGTACTTCGCATGAGCCCCTTGATTTCGATC
TGCTGCAAGAAAAGGCCTTAGAAGTGTTGCATGAGAAGAACGTGTAG

Upstream 100 bases:

>100_bases
CTTCGGAGATAAAGAAGCTTTTTTCCGAACCAAAATACTCCACCATGGAGGAGCTACTACAAATCCGCAAGAATACCAAC
AAGAAAAAAGTACATAAGTA

Downstream 100 bases:

>100_bases
ATACTAATTGAAAAGTGCACCAATATTCCAATTGAAAAGTGCGCCGCCATAGGATAAGTATAATGACCTTTGTATCATCC
AAATACAAAGGTAAAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: HipA Domain-Containing Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Hipa Domain Protein; HipA Family Protein; HipA-Family Phosphatidylinositol 3/4-Kinase; Hipa Protein; HipA-Like C-Terminal Domain Family; Capsule Biosynthesis Protein HipA; HipA-Like N-Terminal Domain Family; HIPA Protein; HipA-Like Protein

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRIKKIERLIVKYHEQIVGTLSLTPDNKQCAFEYDKAWLSNGFSISPLELPLKPGLFIAKPSPFYGNFGVFEDSLPDGYG
RYLLHKALLKEGINDTQLSALDRLSLVGNGGMGALTYEPETSIGTSHEPLDFDLLQEKALEVLHEKNV

Sequences:

>Translated_148_residues
MRIKKIERLIVKYHEQIVGTLSLTPDNKQCAFEYDKAWLSNGFSISPLELPLKPGLFIAKPSPFYGNFGVFEDSLPDGYG
RYLLHKALLKEGINDTQLSALDRLSLVGNGGMGALTYEPETSIGTSHEPLDFDLLQEKALEVLHEKNV
>Mature_148_residues
MRIKKIERLIVKYHEQIVGTLSLTPDNKQCAFEYDKAWLSNGFSISPLELPLKPGLFIAKPSPFYGNFGVFEDSLPDGYG
RYLLHKALLKEGINDTQLSALDRLSLVGNGGMGALTYEPETSIGTSHEPLDFDLLQEKALEVLHEKNV

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16523; Mature: 16523

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKKIERLIVKYHEQIVGTLSLTPDNKQCAFEYDKAWLSNGFSISPLELPLKPGLFIAK
CCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEC
PSPFYGNFGVFEDSLPDGYGRYLLHKALLKEGINDTQLSALDRLSLVGNGGMGALTYEPE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCEEEEECCC
TSIGTSHEPLDFDLLQEKALEVLHEKNV
CCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIKKIERLIVKYHEQIVGTLSLTPDNKQCAFEYDKAWLSNGFSISPLELPLKPGLFIAK
CCHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEC
PSPFYGNFGVFEDSLPDGYGRYLLHKALLKEGINDTQLSALDRLSLVGNGGMGALTYEPE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCEEEEECCC
TSIGTSHEPLDFDLLQEKALEVLHEKNV
CCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA