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The map label for this gene is arnC [H]

Identifier: 150006844

GI number: 150006844

Start: 185240

End: 186190

Strand: Reverse

Name: arnC [H]

Synonym: BDI_0175

Alternate gene names: 150006844

Gene position: 186190-185240 (Counterclockwise)

Preceding gene: 150006845

Following gene: 150006843

Centisome position: 3.87

GC content: 43.74

Gene sequence:

>951_bases
ATGGACATATCAGTTGTTATCCCGTTGTATAACGAAGCCGAGTCTTTACCCGAGTTATTCTCGTGGATAGAGCGGGTGAT
GAAAGAACATAATTATACCTATGAAGTCATTTTCGTGAATGACGGCAGTACGGATAATTCTTGGGAAGTGATCGAGGAGT
TGAAGCAACGTTCTCCACACGTCCGGGGAATCAAGTTCCGTCGCAACTACGGTAAGTCGCCGGGATTGCATTGCGGATTC
CAACGGGCTAAAGGTGACGTGGTCATTACCATGGACGCCGATCTGCAGGACAGCCCGGATGAGATACCCGAACTTTACCG
GATGATCACCGAAGACGGGTACGATCTGGTATCCGGCTGGAAAAAGAAAAGATATGACCCGTTGTCTAAGACGATCCCCA
CGAAATTATTCAACGCGACAGCTCGTAAATTCTCGGGAATAAAGAACTTACACGATTTCAATTGCGGATTGAAAGCGTAT
AAGAATGTTGTCATTAAAAATATAGAGGTGTATAACGATATGCACCGTTACATACCTTATTTAGCTAAGATTGCCGGATT
TCACAAGATTGGCGAGAAAGTAGTGAAACATCAAGCCCGCAAGTACGGAACTACTAAATTCGGGTTGGATCGCTTCGTGA
ACGGTTATCTTGATTTGATCACGCTTTGGTTTACTTCCAAATTCGGAAAGAAACCGATGCACTTCTTCGGTTTATGGGGA
AGCGCTATGTTCTTCATTGGTTTTATCGCTCTAGTAATCGTACTCAGCATGAAATTGATCTCGATGTACTCTGGAGATCT
AAGACCTTTGGTTACAAGTTCCCCTTATTTCTATATTTCATTGACAGCGATGATTCTGGGAACCCAGATGTTCCTAGCGG
GCTTTATCGGGGAGTTGATTTCCCGCAATTCTCCGAATCGCAATAACTATAAAATAGAGGATGAGATATGA

Upstream 100 bases:

>100_bases
CGGCATCATACTTTCTATACCGGTAGCGGCTCTCTTGTGCAGGAACAATTCGACAGGTTCCATCACTGAAAACCGCTAAA
AAGTTAATTACAGACAAATA

Downstream 100 bases:

>100_bases
GTTTCCTAGAATTAGCGAGAAAACGTTGTTCTATCCGAAAGTATGCCCCCAAAAACGTAGAGCAAGAAAAGATTGATTAT
ATCCTAGAAGCAGCTCGTTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MDISVVIPLYNEAESLPELFSWIERVMKEHNYTYEVIFVNDGSTDNSWEVIEELKQRSPHVRGIKFRRNYGKSPGLHCGF
QRAKGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGWKKKRYDPLSKTIPTKLFNATARKFSGIKNLHDFNCGLKAY
KNVVIKNIEVYNDMHRYIPYLAKIAGFHKIGEKVVKHQARKYGTTKFGLDRFVNGYLDLITLWFTSKFGKKPMHFFGLWG
SAMFFIGFIALVIVLSMKLISMYSGDLRPLVTSSPYFYISLTAMILGTQMFLAGFIGELISRNSPNRNNYKIEDEI

Sequences:

>Translated_316_residues
MDISVVIPLYNEAESLPELFSWIERVMKEHNYTYEVIFVNDGSTDNSWEVIEELKQRSPHVRGIKFRRNYGKSPGLHCGF
QRAKGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGWKKKRYDPLSKTIPTKLFNATARKFSGIKNLHDFNCGLKAY
KNVVIKNIEVYNDMHRYIPYLAKIAGFHKIGEKVVKHQARKYGTTKFGLDRFVNGYLDLITLWFTSKFGKKPMHFFGLWG
SAMFFIGFIALVIVLSMKLISMYSGDLRPLVTSSPYFYISLTAMILGTQMFLAGFIGELISRNSPNRNNYKIEDEI
>Mature_316_residues
MDISVVIPLYNEAESLPELFSWIERVMKEHNYTYEVIFVNDGSTDNSWEVIEELKQRSPHVRGIKFRRNYGKSPGLHCGF
QRAKGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGWKKKRYDPLSKTIPTKLFNATARKFSGIKNLHDFNCGLKAY
KNVVIKNIEVYNDMHRYIPYLAKIAGFHKIGEKVVKHQARKYGTTKFGLDRFVNGYLDLITLWFTSKFGKKPMHFFGLWG
SAMFFIGFIALVIVLSMKLISMYSGDLRPLVTSSPYFYISLTAMILGTQMFLAGFIGELISRNSPNRNNYKIEDEI

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=5e-14,
Organism=Escherichia coli, GI1788588, Length=302, Percent_Identity=31.7880794701987, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1788692, Length=313, Percent_Identity=29.073482428115, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790044, Length=141, Percent_Identity=31.2056737588652, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71999402, Length=225, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325441, Length=266, Percent_Identity=25.9398496240602, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585265, Length=246, Percent_Identity=27.6422764227642, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36444; Mature: 36444

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISVVIPLYNEAESLPELFSWIERVMKEHNYTYEVIFVNDGSTDNSWEVIEELKQRSPH
CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCC
VRGIKFRRNYGKSPGLHCGFQRAKGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGW
CCCCHHHHCCCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
KKKRYDPLSKTIPTKLFNATARKFSGIKNLHDFNCGLKAYKNVVIKNIEVYNDMHRYIPY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAKIAGFHKIGEKVVKHQARKYGTTKFGLDRFVNGYLDLITLWFTSKFGKKPMHFFGLWG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SAMFFIGFIALVIVLSMKLISMYSGDLRPLVTSSPYFYISLTAMILGTQMFLAGFIGELI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SRNSPNRNNYKIEDEI
HCCCCCCCCEEECCCC
>Mature Secondary Structure
MDISVVIPLYNEAESLPELFSWIERVMKEHNYTYEVIFVNDGSTDNSWEVIEELKQRSPH
CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHCCCC
VRGIKFRRNYGKSPGLHCGFQRAKGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGW
CCCCHHHHCCCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
KKKRYDPLSKTIPTKLFNATARKFSGIKNLHDFNCGLKAYKNVVIKNIEVYNDMHRYIPY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAKIAGFHKIGEKVVKHQARKYGTTKFGLDRFVNGYLDLITLWFTSKFGKKPMHFFGLWG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SAMFFIGFIALVIVLSMKLISMYSGDLRPLVTSSPYFYISLTAMILGTQMFLAGFIGELI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SRNSPNRNNYKIEDEI
HCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA