| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is gmk [H]
Identifier: 150006825
GI number: 150006825
Start: 168654
End: 169220
Strand: Reverse
Name: gmk [H]
Synonym: BDI_0156
Alternate gene names: 150006825
Gene position: 169220-168654 (Counterclockwise)
Preceding gene: 150006826
Following gene: 150006824
Centisome position: 3.52
GC content: 46.21
Gene sequence:
>567_bases ATGGCTGGCAAATTAATTATCTTCTCCGCACCCTCGGGTTCCGGAAAATCAACCATTATTAATTATCTTTTGAAACAAGA TTTACACCTTCGCTTCTCCATCTCGGCTACCAGCCGGGCTCCGCGGGGAACCGAGAAGAATGGTGTGGAATATTATTTCC TTACGCCGGAAGAGTTCCGCAGTCGTATCGCTAATGGAGACTTCTTGGAATATGAGGAGGTGTATACCGATAAATATTAC GGTACGTTAAAGAGCGAGGTAGAGCGTATCTTGAACGAAGGGGATAACGTGATTTTCGATGTGGATGTGGTAGGCGGATG CAATATCAAGAAATTCTATGGAGACCGTGCCCTGTCTGTCTTTATCCAACCTCCTTGCATCGATGACCTACGGAAGCGAT TGGAAGGACGGGGAACAGACAGCCCGGAAGTTATCGAAAGCCGTATCGCCAAGGCTGAGTATGAATTAGGGTTCACGGGA CAGTTTGATAAGGTTGTCGTAAACGATGATCTGGAGACTGCCCAAAAAGACGCGTTGAAGATCATTCGTGAGTTCTTAAA CAAATAG
Upstream 100 bases:
>100_bases GCAACCACGCCGAGATGCAGAAGATCGTGGTCCAGATGAAAGACGAGTTGGAACAAATCAAGGAACAGGTACTAAACGTA TTATAATAAGATTAACGAGA
Downstream 100 bases:
>100_bases TCTATGTCTAATATATTCAAGAATACCCGTTTTATGATGGGGCTTTCTATCGTTTGTGGGATAGCGAGCCTCGTATTAGG TGGTATTAGCCTGTATTATA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAGKLIIFSAPSGSGKSTIINYLLKQDLHLRFSISATSRAPRGTEKNGVEYYFLTPEEFRSRIANGDFLEYEEVYTDKYY GTLKSEVERILNEGDNVIFDVDVVGGCNIKKFYGDRALSVFIQPPCIDDLRKRLEGRGTDSPEVIESRIAKAEYELGFTG QFDKVVVNDDLETAQKDALKIIREFLNK
Sequences:
>Translated_188_residues MAGKLIIFSAPSGSGKSTIINYLLKQDLHLRFSISATSRAPRGTEKNGVEYYFLTPEEFRSRIANGDFLEYEEVYTDKYY GTLKSEVERILNEGDNVIFDVDVVGGCNIKKFYGDRALSVFIQPPCIDDLRKRLEGRGTDSPEVIESRIAKAEYELGFTG QFDKVVVNDDLETAQKDALKIIREFLNK >Mature_187_residues AGKLIIFSAPSGSGKSTIINYLLKQDLHLRFSISATSRAPRGTEKNGVEYYFLTPEEFRSRIANGDFLEYEEVYTDKYYG TLKSEVERILNEGDNVIFDVDVVGGCNIKKFYGDRALSVFIQPPCIDDLRKRLEGRGTDSPEVIESRIAKAEYELGFTGQ FDKVVVNDDLETAQKDALKIIREFLNK
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=193, Percent_Identity=35.7512953367876, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI4504221, Length=193, Percent_Identity=35.7512953367876, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI226874831, Length=193, Percent_Identity=35.7512953367876, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI111154074, Length=167, Percent_Identity=29.940119760479, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1790080, Length=183, Percent_Identity=43.1693989071038, Blast_Score=139, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17508835, Length=193, Percent_Identity=37.3056994818653, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI193203132, Length=193, Percent_Identity=37.3056994818653, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6320662, Length=175, Percent_Identity=41.1428571428571, Blast_Score=139, Evalue=2e-34, Organism=Drosophila melanogaster, GI21356141, Length=173, Percent_Identity=37.5722543352601, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21282; Mature: 21151
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKLIIFSAPSGSGKSTIINYLLKQDLHLRFSISATSRAPRGTEKNGVEYYFLTPEEFR CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECHHHHH SRIANGDFLEYEEVYTDKYYGTLKSEVERILNEGDNVIFDVDVVGGCNIKKFYGDRALSV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCEEEEE FIQPPCIDDLRKRLEGRGTDSPEVIESRIAKAEYELGFTGQFDKVVVNDDLETAQKDALK EECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH IIREFLNK HHHHHHCC >Mature Secondary Structure AGKLIIFSAPSGSGKSTIINYLLKQDLHLRFSISATSRAPRGTEKNGVEYYFLTPEEFR CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECHHHHH SRIANGDFLEYEEVYTDKYYGTLKSEVERILNEGDNVIFDVDVVGGCNIKKFYGDRALSV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCEEEEE FIQPPCIDDLRKRLEGRGTDSPEVIESRIAKAEYELGFTGQFDKVVVNDDLETAQKDALK EECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH IIREFLNK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]