| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150006760
Identifier: 150006760
GI number: 150006760
Start: 91210
End: 92988
Strand: Reverse
Name: 150006760
Synonym: BDI_0086
Alternate gene names: NA
Gene position: 92988-91210 (Counterclockwise)
Preceding gene: 150006761
Following gene: 150006759
Centisome position: 1.93
GC content: 53.79
Gene sequence:
>1779_bases ATGAAAAAGTTAATATATGCAATATGTATGGGCGCTGCCGTAGCCTTCTCCAGTTGTGAGGACATGCTCGACACGACCAA TTACACAGAGAAGACAACCGCTACATTCCCGGAGTCGTACGACGATGCCCAGCAAATGATAGCAGGCGTTTACGCCAGCA TGGCATCCGTTTGCGCCAACCCCGAGAGATCGTTCCTTTATTACGCCCAACTAGCCAGCGATGACGCGCTAGGCGGGGGC GGCTCGAACGACAAGCTGATGCAGGCCATGGACCTGCTCTGCAACTATCAGTCCGACATGACCCGCCAGTTCTGGAAAGA CCGTTATGCCGGCGTATTCCGTGCCAACAGCGCCATAGAGACCTTGGATAACTGTCCGGACTTTCCTTCCACGGAAGCAC GTAACCAATTGATGGGCGAGGCTCTCTTCATGCGTGCCTATTTCTACTACGAGCTAGCCTCGATGTACAATCGTGTACCC CTAATCACTACATCCCAGACAAGCGATGTGCCACAGGCAAGCCCCGCCGAGATCTGGGGACAGATCTTGCTAGACCTTAA GACAGCCGCCGACATCATGCCCGCATGGCGTGGAGGTACGTCATCCCTTGAGGCAGGACACGTCGACAAGTACACCGCCG AGGCCATGTTAGGCCGTGCTTGGTTGTTCTACACCGGCATGTACGGGAATGGCGAAGATATAGCCGCCTTGACCAGCGCC ACTTACAACCCGCTGACCTCCGTCACCTTGGCCGACGGCTCTACCCTAACGAAGGATCAAGTGATCTCTTATATCGATGA TTGCGTGAACAATTCCGGATATTCCTTAGCATCCGACTTCCGTAGCCTTTGGGCTTACACGAACCGTTGCACGGTGAACG ATTTCGAATACACCGCCGGAAAAGGATTGAAATGGGTAGAGGATGATAACGCCGTCAACCCGGAATCTATGTTCGCCATC AAGTTCAATAAGCTGGCCAGTTGGAATACTACCATCGCTTTCGCCAATGGTTACGCGCTTCATTTCGGTCTTCGCGGAGA TCAAGACGTAGCAAATACCTTCCCCTTCGGACAAGGTTGGGGAGCCGGGCCTGTAGCACCGAATTTCGTGAACGATTGGG CAAGCGCAGAACCAAATGACATGCGTCGCGACGCTTCCGTATATCGTACGGACAAATTACCCGCTTATAACAAAGGCGGT TGGGCGGACTTCGTACAGGAAACGGACTACTATGCCATGAAATGGTCTCCTGTCGCATGCAAGACATCCAATGACGAGAG TGGCTACTTCAAGACCTTCGAGAACGAGATGTACGGAATCGATGGCTGGACGCAAGGCGCGAATAACCAAGCCTTGGACA ACATCCACGACTTGGTATTGATCCGCTTCGCTGACGTTCTCTTGATGCAATCCGAGCTCAAGGGAGATGCCACCGGTATG AATAAGGTGCGGGAGCGTGCCGGCCTTCCGGCTATCGGCTACTCGCTCCAAGCTCTGCAAAACGAGCGCCGTTGGGAATT AGCTTTGGAGGGTACCCGTTGGAACGACATCCGCCGCTGGCACATTGCCGCCGCTGCCTTGCAGAAACAGATAGGTACGC CTATCTACATCGCTGGTAATCCTGCCACGAACAAGGCGCAAAATGGTGGTTACGCCTCCCGCTACAACACCTCCGCCGGT TTCATGAAGATACCTGAGAGCCAGATCTCACTCTCCAGTGAACTCCAGCAGAACGAAGGTTGGGGAGCGGACGCCGAGTA CAATGGCTGGGCTAATTAA
Upstream 100 bases:
>100_bases CGAGGACAATCCTTGGGCAAGAGGTATCGACTTAGGTTCTTATCCTTCACCCAGAACTTATATGGTAGGTGTTAACATTA AATTTTAAGAGAAAAGCAAC
Downstream 100 bases:
>100_bases TAACTTTTTAATTCAGAATATACAATCATGATAAAGAATATATATTATATAGTAATGGCATTGATCGCAGGAATGATGGT TTCCTGCGACCCAATCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; Lipoprotein; SusD Family Protein
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MKKLIYAICMGAAVAFSSCEDMLDTTNYTEKTTATFPESYDDAQQMIAGVYASMASVCANPERSFLYYAQLASDDALGGG GSNDKLMQAMDLLCNYQSDMTRQFWKDRYAGVFRANSAIETLDNCPDFPSTEARNQLMGEALFMRAYFYYELASMYNRVP LITTSQTSDVPQASPAEIWGQILLDLKTAADIMPAWRGGTSSLEAGHVDKYTAEAMLGRAWLFYTGMYGNGEDIAALTSA TYNPLTSVTLADGSTLTKDQVISYIDDCVNNSGYSLASDFRSLWAYTNRCTVNDFEYTAGKGLKWVEDDNAVNPESMFAI KFNKLASWNTTIAFANGYALHFGLRGDQDVANTFPFGQGWGAGPVAPNFVNDWASAEPNDMRRDASVYRTDKLPAYNKGG WADFVQETDYYAMKWSPVACKTSNDESGYFKTFENEMYGIDGWTQGANNQALDNIHDLVLIRFADVLLMQSELKGDATGM NKVRERAGLPAIGYSLQALQNERRWELALEGTRWNDIRRWHIAAAALQKQIGTPIYIAGNPATNKAQNGGYASRYNTSAG FMKIPESQISLSSELQQNEGWGADAEYNGWAN
Sequences:
>Translated_592_residues MKKLIYAICMGAAVAFSSCEDMLDTTNYTEKTTATFPESYDDAQQMIAGVYASMASVCANPERSFLYYAQLASDDALGGG GSNDKLMQAMDLLCNYQSDMTRQFWKDRYAGVFRANSAIETLDNCPDFPSTEARNQLMGEALFMRAYFYYELASMYNRVP LITTSQTSDVPQASPAEIWGQILLDLKTAADIMPAWRGGTSSLEAGHVDKYTAEAMLGRAWLFYTGMYGNGEDIAALTSA TYNPLTSVTLADGSTLTKDQVISYIDDCVNNSGYSLASDFRSLWAYTNRCTVNDFEYTAGKGLKWVEDDNAVNPESMFAI KFNKLASWNTTIAFANGYALHFGLRGDQDVANTFPFGQGWGAGPVAPNFVNDWASAEPNDMRRDASVYRTDKLPAYNKGG WADFVQETDYYAMKWSPVACKTSNDESGYFKTFENEMYGIDGWTQGANNQALDNIHDLVLIRFADVLLMQSELKGDATGM NKVRERAGLPAIGYSLQALQNERRWELALEGTRWNDIRRWHIAAAALQKQIGTPIYIAGNPATNKAQNGGYASRYNTSAG FMKIPESQISLSSELQQNEGWGADAEYNGWAN >Mature_592_residues MKKLIYAICMGAAVAFSSCEDMLDTTNYTEKTTATFPESYDDAQQMIAGVYASMASVCANPERSFLYYAQLASDDALGGG GSNDKLMQAMDLLCNYQSDMTRQFWKDRYAGVFRANSAIETLDNCPDFPSTEARNQLMGEALFMRAYFYYELASMYNRVP LITTSQTSDVPQASPAEIWGQILLDLKTAADIMPAWRGGTSSLEAGHVDKYTAEAMLGRAWLFYTGMYGNGEDIAALTSA TYNPLTSVTLADGSTLTKDQVISYIDDCVNNSGYSLASDFRSLWAYTNRCTVNDFEYTAGKGLKWVEDDNAVNPESMFAI KFNKLASWNTTIAFANGYALHFGLRGDQDVANTFPFGQGWGAGPVAPNFVNDWASAEPNDMRRDASVYRTDKLPAYNKGG WADFVQETDYYAMKWSPVACKTSNDESGYFKTFENEMYGIDGWTQGANNQALDNIHDLVLIRFADVLLMQSELKGDATGM NKVRERAGLPAIGYSLQALQNERRWELALEGTRWNDIRRWHIAAAALQKQIGTPIYIAGNPATNKAQNGGYASRYNTSAG FMKIPESQISLSSELQQNEGWGADAEYNGWAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65560; Mature: 65560
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIYAICMGAAVAFSSCEDMLDTTNYTEKTTATFPESYDDAQQMIAGVYASMASVCAN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC PERSFLYYAQLASDDALGGGGSNDKLMQAMDLLCNYQSDMTRQFWKDRYAGVFRANSAIE CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH TLDNCPDFPSTEARNQLMGEALFMRAYFYYELASMYNRVPLITTSQTSDVPQASPAEIWG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHH QILLDLKTAADIMPAWRGGTSSLEAGHVDKYTAEAMLGRAWLFYTGMYGNGEDIAALTSA HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHC TYNPLTSVTLADGSTLTKDQVISYIDDCVNNSGYSLASDFRSLWAYTNRCTVNDFEYTAG CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC KGLKWVEDDNAVNPESMFAIKFNKLASWNTTIAFANGYALHFGLRGDQDVANTFPFGQGW CCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECCCCCCHHHHCCCCCCCC GAGPVAPNFVNDWASAEPNDMRRDASVYRTDKLPAYNKGGWADFVQETDYYAMKWSPVAC CCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCEEE KTSNDESGYFKTFENEMYGIDGWTQGANNQALDNIHDLVLIRFADVLLMQSELKGDATGM ECCCCCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH NKVRERAGLPAIGYSLQALQNERRWELALEGTRWNDIRRWHIAAAALQKQIGTPIYIAGN HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECC PATNKAQNGGYASRYNTSAGFMKIPESQISLSSELQQNEGWGADAEYNGWAN CCCCCCCCCCCCCEECCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLIYAICMGAAVAFSSCEDMLDTTNYTEKTTATFPESYDDAQQMIAGVYASMASVCAN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC PERSFLYYAQLASDDALGGGGSNDKLMQAMDLLCNYQSDMTRQFWKDRYAGVFRANSAIE CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH TLDNCPDFPSTEARNQLMGEALFMRAYFYYELASMYNRVPLITTSQTSDVPQASPAEIWG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHH QILLDLKTAADIMPAWRGGTSSLEAGHVDKYTAEAMLGRAWLFYTGMYGNGEDIAALTSA HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHC TYNPLTSVTLADGSTLTKDQVISYIDDCVNNSGYSLASDFRSLWAYTNRCTVNDFEYTAG CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC KGLKWVEDDNAVNPESMFAIKFNKLASWNTTIAFANGYALHFGLRGDQDVANTFPFGQGW CCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECCCCCCHHHHCCCCCCCC GAGPVAPNFVNDWASAEPNDMRRDASVYRTDKLPAYNKGGWADFVQETDYYAMKWSPVAC CCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCEEE KTSNDESGYFKTFENEMYGIDGWTQGANNQALDNIHDLVLIRFADVLLMQSELKGDATGM ECCCCCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH NKVRERAGLPAIGYSLQALQNERRWELALEGTRWNDIRRWHIAAAALQKQIGTPIYIAGN HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECC PATNKAQNGGYASRYNTSAGFMKIPESQISLSSELQQNEGWGADAEYNGWAN CCCCCCCCCCCCCEECCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA