Click here to switch to the map view.

The map label for this gene is 150006729

Identifier: 150006729

GI number: 150006729

Start: 56104

End: 56949

Strand: Reverse

Name: 150006729

Synonym: BDI_0055

Alternate gene names: NA

Gene position: 56949-56104 (Counterclockwise)

Preceding gene: 150006730

Following gene: 150006728

Centisome position: 1.18

GC content: 34.28

Gene sequence:

>846_bases
ATGAACAAGCTTATTAACAGAATTTCTCCGGAAACATCTGAAAACCGAATCTTACACGCTGGCTTTAGTATCATATTGAT
GTCAGAGGAAATAACACAAACCCTATCTGGTTTATCCAGCGATATGATTATTTTTATCTTAAGCGGATCCATAACTATAT
ATTCCACTAAAGAAGAAAAGAAAACAATCGGTGAACAGTATATGATCTTTCTAAGATCATTTGAAAATTACACATATGAT
ATCACACTAGGTTCAAAAATCATCATTTTCTTTTTTGACAGTTTAACGATGAATGAGTTACCGTATTACCAACATCCGTA
CGGAATATTACCTCAACCTATCTCTAAGTGGATAGAACTGAAAATAGTGGAACCTTTATACGGTTTTCTAGAACTTGTCG
GACAATATCTTGAAAATAATTTCCTGAACTACCCTTTGTATGAATTAAAGAGAACGGAATTATTCTACTTACTGAAAAAG
CTTTATAGAAAAGAGGAATTAGACTACTTTTTCTATTTATCAAGTACGCATTCAGCAGAGTTTGAGAGACTCATCGCCGA
GAATTATATAAAAGCTAAAACAGTAACAGATCTAGCTCAAATGATAGGTTACGGAGTAAATTCCTTTCGGATGAAGTTTA
AAAAAGTTTTCGGTATTCCAGCCTACGAATGGCTGATGCAAGAGAAATCCAAACGACTATTGGTCGCCATAGCTAACAGC
GAGGATGATTTTAAGAATATAATAGATGAATTCGATTTCTCCTCGCATTCGCATTTCTACAAATTTTGCAAGGCACGCTT
TGGATATAGTCCCACGGAGCTAAGGAAAAAACTTAAATCGTTGTAA

Upstream 100 bases:

>100_bases
TAGTTTGTATACAGACCATACTAATACATTGCGCTTTTTTTGCATCTAGATTTACTGAAGGGGGAAATATTTGTATAACA
AACTAAATAACAATAATTTT

Downstream 100 bases:

>100_bases
AAAACACCCCCTATCAGAATATACATTTAAATTGTCAAGTTGTATAACTCCTAATAAGTTATGCTCATTTATCTTTGCCT
CATTGATTTTAGACACCTAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator AraC Family

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNKLINRISPETSENRILHAGFSIILMSEEITQTLSGLSSDMIIFILSGSITIYSTKEEKKTIGEQYMIFLRSFENYTYD
ITLGSKIIIFFFDSLTMNELPYYQHPYGILPQPISKWIELKIVEPLYGFLELVGQYLENNFLNYPLYELKRTELFYLLKK
LYRKEELDYFFYLSSTHSAEFERLIAENYIKAKTVTDLAQMIGYGVNSFRMKFKKVFGIPAYEWLMQEKSKRLLVAIANS
EDDFKNIIDEFDFSSHSHFYKFCKARFGYSPTELRKKLKSL

Sequences:

>Translated_281_residues
MNKLINRISPETSENRILHAGFSIILMSEEITQTLSGLSSDMIIFILSGSITIYSTKEEKKTIGEQYMIFLRSFENYTYD
ITLGSKIIIFFFDSLTMNELPYYQHPYGILPQPISKWIELKIVEPLYGFLELVGQYLENNFLNYPLYELKRTELFYLLKK
LYRKEELDYFFYLSSTHSAEFERLIAENYIKAKTVTDLAQMIGYGVNSFRMKFKKVFGIPAYEWLMQEKSKRLLVAIANS
EDDFKNIIDEFDFSSHSHFYKFCKARFGYSPTELRKKLKSL
>Mature_281_residues
MNKLINRISPETSENRILHAGFSIILMSEEITQTLSGLSSDMIIFILSGSITIYSTKEEKKTIGEQYMIFLRSFENYTYD
ITLGSKIIIFFFDSLTMNELPYYQHPYGILPQPISKWIELKIVEPLYGFLELVGQYLENNFLNYPLYELKRTELFYLLKK
LYRKEELDYFFYLSSTHSAEFERLIAENYIKAKTVTDLAQMIGYGVNSFRMKFKKVFGIPAYEWLMQEKSKRLLVAIANS
EDDFKNIIDEFDFSSHSHFYKFCKARFGYSPTELRKKLKSL

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33187; Mature: 33187

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLINRISPETSENRILHAGFSIILMSEEITQTLSGLSSDMIIFILSGSITIYSTKEEK
CCCHHHHCCCCCCCCEEEECCEEEEEECHHHHHHHHCCCCCEEEEEEECCEEEEECCHHH
KTIGEQYMIFLRSFENYTYDITLGSKIIIFFFDSLTMNELPYYQHPYGILPQPISKWIEL
HHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHEE
KIVEPLYGFLELVGQYLENNFLNYPLYELKRTELFYLLKKLYRKEELDYFFYLSSTHSAE
EHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
FERLIAENYIKAKTVTDLAQMIGYGVNSFRMKFKKVFGIPAYEWLMQEKSKRLLVAIANS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECC
EDDFKNIIDEFDFSSHSHFYKFCKARFGYSPTELRKKLKSL
CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNKLINRISPETSENRILHAGFSIILMSEEITQTLSGLSSDMIIFILSGSITIYSTKEEK
CCCHHHHCCCCCCCCEEEECCEEEEEECHHHHHHHHCCCCCEEEEEEECCEEEEECCHHH
KTIGEQYMIFLRSFENYTYDITLGSKIIIFFFDSLTMNELPYYQHPYGILPQPISKWIEL
HHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHEE
KIVEPLYGFLELVGQYLENNFLNYPLYELKRTELFYLLKKLYRKEELDYFFYLSSTHSAE
EHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
FERLIAENYIKAKTVTDLAQMIGYGVNSFRMKFKKVFGIPAYEWLMQEKSKRLLVAIANS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECC
EDDFKNIIDEFDFSSHSHFYKFCKARFGYSPTELRKKLKSL
CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA