| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150006606
Identifier: 150006606
GI number: 150006606
Start: 5076713
End: 5078092
Strand: Direct
Name: 150006606
Synonym: BVU_4126
Alternate gene names: NA
Gene position: 5076713-5078092 (Clockwise)
Preceding gene: 150006605
Following gene: 150006608
Centisome position: 98.33
GC content: 48.84
Gene sequence:
>1380_bases ATGAAAAAGACAATGATACTCCCCCTCTGCTGTCTGCTGTGGCATCTTGCCACCCCCGCATGGGCACAGGAAACACTGAG TCTGAAAGAGTGCCGCGAAATGGCATTAAAATACAACAAGGAAATGGCGGCTTCCGTGAAACAGACGGAAAGTGCCCGTT ATACTGCCAAGAGTTACAAAGGGAACTTCTTCCCCAACTTCACCGTCAGCGGAACAGGACTTTACAGTAATGCCGACGGT AGTTACGGCATAGCCGGAGGCAACCTGCCCGTCTTTCTGCCCGATGGAACAGGACAGTTCAATCCGGGACAACCCGCAGG CTTTGCCTACTTCCCCGGCATTAACCTGGACTATAAAATAGGATGGGTCTATATGGGCGGTGTGCAAATGGAACAGCCCC TCTACATGGGCGGTAAAATCCGTGCCGCCTACAAAATGTCCTTGCTGGGCAAAGAAATGGCACAAATGAATGAAAATCTG ACCGCAACAGAAGTCATTCAGAAAACAGATCAGGCATACGCTCTGGTAGTAAAAGCAAAGGAGATGAAAACAGTAGCCGA TGCATACCACGCTGTATTGACGGAATTAAAAAATAACGTAGAGAGTGCTTACAAACATGGACTTAAACCTCAGAATGATG TATTGAAAGTACAAGTAAAGCTGAATGAAAGCGAGCTAGGTATCCGAAAAGCCGAGAATGCTCTCCGCCTGGCTACCATG AACCTCTGCCACCTGATAGGGAAACCACTGACCACACAAGTTCATGTTTCCGGAGATTTCCCGGAGATAGAGAAAGACCT GGAAGTACAGGTACTGGATATCACCCGCCGTCCGGAATACGGAATACTGGACAAACAAGTGGCGATAGCCCGCCAGCAGG TGAAACTGAACCGCAGTGAACTGCTTCCCAAAGTAGGGATCAAAGGCTCATACGACTATGTACATGGTTTGGAACTGAAC AACAAGAATTTCCTGGACGATGCCAGTTTCTCTGTCCTTCTGAATGTAAGCATCCCCTTGTTCCATTTCGGAGAACGCAG CAACAAAGTACGTGCAGCCAAAGCCAAACTGGAACAAACCCGCCTTCAACAGCAAAACCTGAACGAACAAATGTTACTGG AACTGACCCAAGCCGCCAACAATCTGGACGAAGCAAAGCTGGAAAGCGAACTTGCCGACCGTTCCCTGCAACAGGCGGAA GAGAACAGGCGTGTCAGCAAAAGCCAGTACGAAGTAGGTCTGGAAACACTCTCCGACCATTTGGAAGCCCAAGCGTTATG GCAACAGGCTTACGAAACGAAAGTTGACGCCCGTTTCCAACTTTATCTGAACTACGTGGCCTATCTGAAAGCAGCAGGGA CCTTGCATGACAAGCTGTAA
Upstream 100 bases:
>100_bases GCACACTGATCACGCTGCTCTTTATCCCTATATTATATGCCTTGTTCTTCAAGATAAAAAACAATTGATTCATTTCACTG ACATACAAAACCGAGAATAA
Downstream 100 bases:
>100_bases GTCTCTTGTTCCGGATTCAGATTGAGTACAAATACAAGCAATCCCTCCTTCTCCGGAGTTTTATAAATGTGCTGCCACTG CTACCACCCACTCTACTGGA
Product: putative outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Type I Secretion Outer Membrane Protein; Acriflavin Resistance Protein; Outer Membrane Protein-Like; RND Family Efflux Pump Outer Membrane Protein; FusA/NodT Family Protein
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKKTMILPLCCLLWHLATPAWAQETLSLKECREMALKYNKEMAASVKQTESARYTAKSYKGNFFPNFTVSGTGLYSNADG SYGIAGGNLPVFLPDGTGQFNPGQPAGFAYFPGINLDYKIGWVYMGGVQMEQPLYMGGKIRAAYKMSLLGKEMAQMNENL TATEVIQKTDQAYALVVKAKEMKTVADAYHAVLTELKNNVESAYKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATM NLCHLIGKPLTTQVHVSGDFPEIEKDLEVQVLDITRRPEYGILDKQVAIARQQVKLNRSELLPKVGIKGSYDYVHGLELN NKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAE ENRRVSKSQYEVGLETLSDHLEAQALWQQAYETKVDARFQLYLNYVAYLKAAGTLHDKL
Sequences:
>Translated_459_residues MKKTMILPLCCLLWHLATPAWAQETLSLKECREMALKYNKEMAASVKQTESARYTAKSYKGNFFPNFTVSGTGLYSNADG SYGIAGGNLPVFLPDGTGQFNPGQPAGFAYFPGINLDYKIGWVYMGGVQMEQPLYMGGKIRAAYKMSLLGKEMAQMNENL TATEVIQKTDQAYALVVKAKEMKTVADAYHAVLTELKNNVESAYKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATM NLCHLIGKPLTTQVHVSGDFPEIEKDLEVQVLDITRRPEYGILDKQVAIARQQVKLNRSELLPKVGIKGSYDYVHGLELN NKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAE ENRRVSKSQYEVGLETLSDHLEAQALWQQAYETKVDARFQLYLNYVAYLKAAGTLHDKL >Mature_459_residues MKKTMILPLCCLLWHLATPAWAQETLSLKECREMALKYNKEMAASVKQTESARYTAKSYKGNFFPNFTVSGTGLYSNADG SYGIAGGNLPVFLPDGTGQFNPGQPAGFAYFPGINLDYKIGWVYMGGVQMEQPLYMGGKIRAAYKMSLLGKEMAQMNENL TATEVIQKTDQAYALVVKAKEMKTVADAYHAVLTELKNNVESAYKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATM NLCHLIGKPLTTQVHVSGDFPEIEKDLEVQVLDITRRPEYGILDKQVAIARQQVKLNRSELLPKVGIKGSYDYVHGLELN NKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQTRLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAE ENRRVSKSQYEVGLETLSDHLEAQALWQQAYETKVDARFQLYLNYVAYLKAAGTLHDKL
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51470; Mature: 51470
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTMILPLCCLLWHLATPAWAQETLSLKECREMALKYNKEMAASVKQTESARYTAKSYK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC GNFFPNFTVSGTGLYSNADGSYGIAGGNLPVFLPDGTGQFNPGQPAGFAYFPGINLDYKI CCCCCCEEEECCCEEECCCCCCEECCCCCEEEECCCCCCCCCCCCCCEEECCCCCCEEEE GWVYMGGVQMEQPLYMGGKIRAAYKMSLLGKEMAQMNENLTATEVIQKTDQAYALVVKAK EEEEECCEEECCCEECCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHH EMKTVADAYHAVLTELKNNVESAYKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH NLCHLIGKPLTTQVHVSGDFPEIEKDLEVQVLDITRRPEYGILDKQVAIARQQVKLNRSE HHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHH LLPKVGIKGSYDYVHGLELNNKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQT CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHH RLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLETLSDH HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LEAQALWQQAYETKVDARFQLYLNYVAYLKAAGTLHDKL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MKKTMILPLCCLLWHLATPAWAQETLSLKECREMALKYNKEMAASVKQTESARYTAKSYK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC GNFFPNFTVSGTGLYSNADGSYGIAGGNLPVFLPDGTGQFNPGQPAGFAYFPGINLDYKI CCCCCCEEEECCCEEECCCCCCEECCCCCEEEECCCCCCCCCCCCCCEEECCCCCCEEEE GWVYMGGVQMEQPLYMGGKIRAAYKMSLLGKEMAQMNENLTATEVIQKTDQAYALVVKAK EEEEECCEEECCCEECCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHH EMKTVADAYHAVLTELKNNVESAYKHGLKPQNDVLKVQVKLNESELGIRKAENALRLATM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH NLCHLIGKPLTTQVHVSGDFPEIEKDLEVQVLDITRRPEYGILDKQVAIARQQVKLNRSE HHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHH LLPKVGIKGSYDYVHGLELNNKNFLDDASFSVLLNVSIPLFHFGERSNKVRAAKAKLEQT CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHH RLQQQNLNEQMLLELTQAANNLDEAKLESELADRSLQQAEENRRVSKSQYEVGLETLSDH HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LEAQALWQQAYETKVDARFQLYLNYVAYLKAAGTLHDKL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA