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The map label for this gene is gpsA [H]

Identifier: 150006588

GI number: 150006588

Start: 5050569

End: 5051564

Strand: Direct

Name: gpsA [H]

Synonym: BVU_4108

Alternate gene names: 150006588

Gene position: 5050569-5051564 (Clockwise)

Preceding gene: 150006587

Following gene: 150006589

Centisome position: 97.82

GC content: 43.27

Gene sequence:

>996_bases
ATGAAATTGCCCGGTAAAATAGCGATAATGGGTGGTGGCAGCTGGGCCACGGCTATTGCAAAAATAGTCTTGGCTCAGGC
TGAATCAATCAACTGGTATATGCGCCGCGACGACCGAATTGAAGAATTCAAACGTTTGGGACATAATCCGGCTTATCTGA
CAAGTGTGCGCTTTGAAATAAAGAACATCAACTTCTCTTCAGATATCAACAAGATAGTAAAGGAATCGGATACCCTGATA
TTCGTTACCCCCTCTCCCTATCTGAAAAGCCACCTGAAAAAGCTGAAAACCAAAATAAAGGACAAGTTCATTGTCACTGC
TATCAAGGGTATCGTCCCTGACGAGAACCTGATTGTTTCCGATTATTTTCATCAGGTATACGGTGTTCCCGAAGAGAATA
TAGCCGTCATTGCAGGTCCGTGCCACGCAGAAGAAGTAGCCTTGGAGCGTCTTTCCTATCTGACTATCGGATGTAAAGAC
ATTGACAAGGCGAAGATATTCGCTCGGCAGCTGGCCGGACATTACATAAAAACTTCTGTAAGCCCGGATGTGGCAGGTAT
AGAATACGCTTCGGTATTGAAGAATATTTATGCTATCGCCGCTGGAATTTGCAGCGGTCTGAAATATGGCGACAATTTTC
AGGCTGTATTGATTTCAAATGCCATTCAAGAGATGAACCGCTTCCTGAATACCGTACATCCCGTAGAGCGTTCTATTGAT
GATTCCGCTTATCTGGGTGACTTGTTGGTTACCTCCTACTCCAATTTCAGCCGGAACCGCGTATTCGGAACCATGATTGG
TAAAGGTTATTCCGTAAAAAGCGCACAGATAGAAATGGAAATGATTGCCGAAGGATACTACGGAACGAAATGTATCAAGG
AGCTAAACAAGCACTTGCACGTGAACATGCCTATCGTAGATGCCGTTTATAATATTTTATATGAGCGCATCTCGCCCATG
ATTGAGATTAAATTATTAACTGATTCATTCAGATAA

Upstream 100 bases:

>100_bases
CGGTGGACGAAGTTGCCGGATGGATTGCGAAAATTGAGAATTGAGAATTTAAAGATTGAGAATTATTCCAATTGTCAATT
ATCCATCATAAATAATAAGC

Downstream 100 bases:

>100_bases
AATATCAGATACAATGAAGAATATTAGTTTAAACATCGACAAAGTAGCCGGTTTTGTTTCTAAGGAAACAATCGCTGCTT
ACGAACCTCAGGTGAAAGCC

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKLPGKIAIMGGGSWATAIAKIVLAQAESINWYMRRDDRIEEFKRLGHNPAYLTSVRFEIKNINFSSDINKIVKESDTLI
FVTPSPYLKSHLKKLKTKIKDKFIVTAIKGIVPDENLIVSDYFHQVYGVPEENIAVIAGPCHAEEVALERLSYLTIGCKD
IDKAKIFARQLAGHYIKTSVSPDVAGIEYASVLKNIYAIAAGICSGLKYGDNFQAVLISNAIQEMNRFLNTVHPVERSID
DSAYLGDLLVTSYSNFSRNRVFGTMIGKGYSVKSAQIEMEMIAEGYYGTKCIKELNKHLHVNMPIVDAVYNILYERISPM
IEIKLLTDSFR

Sequences:

>Translated_331_residues
MKLPGKIAIMGGGSWATAIAKIVLAQAESINWYMRRDDRIEEFKRLGHNPAYLTSVRFEIKNINFSSDINKIVKESDTLI
FVTPSPYLKSHLKKLKTKIKDKFIVTAIKGIVPDENLIVSDYFHQVYGVPEENIAVIAGPCHAEEVALERLSYLTIGCKD
IDKAKIFARQLAGHYIKTSVSPDVAGIEYASVLKNIYAIAAGICSGLKYGDNFQAVLISNAIQEMNRFLNTVHPVERSID
DSAYLGDLLVTSYSNFSRNRVFGTMIGKGYSVKSAQIEMEMIAEGYYGTKCIKELNKHLHVNMPIVDAVYNILYERISPM
IEIKLLTDSFR
>Mature_331_residues
MKLPGKIAIMGGGSWATAIAKIVLAQAESINWYMRRDDRIEEFKRLGHNPAYLTSVRFEIKNINFSSDINKIVKESDTLI
FVTPSPYLKSHLKKLKTKIKDKFIVTAIKGIVPDENLIVSDYFHQVYGVPEENIAVIAGPCHAEEVALERLSYLTIGCKD
IDKAKIFARQLAGHYIKTSVSPDVAGIEYASVLKNIYAIAAGICSGLKYGDNFQAVLISNAIQEMNRFLNTVHPVERSID
DSAYLGDLLVTSYSNFSRNRVFGTMIGKGYSVKSAQIEMEMIAEGYYGTKCIKELNKHLHVNMPIVDAVYNILYERISPM
IEIKLLTDSFR

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=335, Percent_Identity=28.955223880597, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI24307999, Length=336, Percent_Identity=27.3809523809524, Blast_Score=107, Evalue=2e-23,
Organism=Escherichia coli, GI1790037, Length=312, Percent_Identity=29.4871794871795, Blast_Score=149, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI32564399, Length=338, Percent_Identity=25.7396449704142, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32564403, Length=350, Percent_Identity=25.7142857142857, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI193210136, Length=350, Percent_Identity=25.7142857142857, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17507425, Length=282, Percent_Identity=28.7234042553192, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI193210134, Length=325, Percent_Identity=23.6923076923077, Blast_Score=74, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324513, Length=361, Percent_Identity=25.7617728531856, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320181, Length=346, Percent_Identity=25.1445086705202, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17136200, Length=333, Percent_Identity=28.2282282282282, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17136204, Length=333, Percent_Identity=28.2282282282282, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17136202, Length=333, Percent_Identity=28.2282282282282, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI22026922, Length=341, Percent_Identity=25.2199413489736, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI45551945, Length=350, Percent_Identity=23.4285714285714, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281362270, Length=247, Percent_Identity=25.9109311740891, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24648969, Length=312, Percent_Identity=23.0769230769231, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 37116; Mature: 37116

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPGKIAIMGGGSWATAIAKIVLAQAESINWYMRRDDRIEEFKRLGHNPAYLTSVRFEI
CCCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCEEEEEEEEE
KNINFSSDINKIVKESDTLIFVTPSPYLKSHLKKLKTKIKDKFIVTAIKGIVPDENLIVS
ECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH
DYFHQVYGVPEENIAVIAGPCHAEEVALERLSYLTIGCKDIDKAKIFARQLAGHYIKTSV
HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCHHEECCC
SPDVAGIEYASVLKNIYAIAAGICSGLKYGDNFQAVLISNAIQEMNRFLNTVHPVERSID
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSAYLGDLLVTSYSNFSRNRVFGTMIGKGYSVKSAQIEMEMIAEGYYGTKCIKELNKHLH
CHHHHHHHHHHHHCCCCCCCEEEHECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEE
VNMPIVDAVYNILYERISPMIEIKLLTDSFR
ECCCHHHHHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure
MKLPGKIAIMGGGSWATAIAKIVLAQAESINWYMRRDDRIEEFKRLGHNPAYLTSVRFEI
CCCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCEEEEEEEEE
KNINFSSDINKIVKESDTLIFVTPSPYLKSHLKKLKTKIKDKFIVTAIKGIVPDENLIVS
ECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH
DYFHQVYGVPEENIAVIAGPCHAEEVALERLSYLTIGCKDIDKAKIFARQLAGHYIKTSV
HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCHHEECCC
SPDVAGIEYASVLKNIYAIAAGICSGLKYGDNFQAVLISNAIQEMNRFLNTVHPVERSID
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DSAYLGDLLVTSYSNFSRNRVFGTMIGKGYSVKSAQIEMEMIAEGYYGTKCIKELNKHLH
CHHHHHHHHHHHHCCCCCCCEEEHECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEE
VNMPIVDAVYNILYERISPMIEIKLLTDSFR
ECCCHHHHHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA