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The map label for this gene is rng [H]

Identifier: 150006583

GI number: 150006583

Start: 5044766

End: 5046340

Strand: Direct

Name: rng [H]

Synonym: BVU_4103

Alternate gene names: 150006583

Gene position: 5044766-5046340 (Clockwise)

Preceding gene: 150006582

Following gene: 150006586

Centisome position: 97.71

GC content: 44.13

Gene sequence:

>1575_bases
GTGACAAGCGAACTAGTAGTAGACGTACAACCCAAAGAGATTTCCATCGCACTCCTTGAAGATAAAGCGTTGGTGGAATT
TCAGAAAGAAGGGAGAAGTGCTTCCTTCAATGTGGGAAATATGTATTTGGGACGGGTAAAGAAACTAATGCCCGGCCTTA
ATGCCTGTTTCGTGGATGTCGGCTTTGAAAAAGATGCTTTTCTTCATTATCTAGACCTAGGTCCTCAATTTCATTCTTAT
CAGAAGTATCTGAAGCAAGTTTTAAGCGACCGTAAAAAACTTTTTCCCATCACAAAAGCTACTATGCTGCCTGATATTGA
AAAGGAAGGGACGGTTTCAACCACCCTCCAACAAGGTCAGGAAGTTATTGTGCAGATTGTAAAGGAACCTATCTCGACCA
AGGGCCCCAGACTAACCTGCGAATTGTCATTCGCCGGACGTTATTTGGTATTAATCCCTTTCAACGATAAGGTTTCGGTA
TCACAAAAAATTAAATCGAGCGAAGAACGCGCCCGTCTGAAACAGTTATTGCAAAGCATCAAACCGAAAAACTTCGGAGT
GATTGTACGCACCGTAGCGGAAGGCAAAAGGGTGGCCGAGCTTGATGCAGAGCTTAAAGTCTTGCTGAAACATTGGGAAG
AAACAATCACTAAAGTACAGAAGGCTCCCAAACTGCCGGCATTGGTATACGAAGAGACCAGCCGCACAGTGGCCATGTTG
CGCGATCTTTTCAATCCGTCTTATGAGAACATCTATGTGAACGATGAAACAGTGTTCCATGAGATTAAGGATTATGTATC
ACTTATCGCCCCTGAACGAGCCGAAATCGTAAAACTGTACAAGGGTCAGCTTCCCATATTCGACAATTTCGGTATTACCA
AACAAATCAAATCCTCTTTCGGGAAAACCATTTCGTATAAAAGTGGAGCTTACCTGATTATTGAACACACAGAAGCACTT
CATGTAGTGGATGTCAATAGTGGAAACCGCTCCAAATCTGCCAACGGGCAGGAGGCTAACGCACTGGATGTAAACCTGGG
TGCCGCCGACGAACTGGCACGCCAGTTAAGATTGCGTGATATGGGTGGTATTATCGTGGTTGACTTCATTGATATGAATC
TAGCAGAGAACCGGCAGAAACTGTACGAACGTATGTGCCAAAACATGCAGAAAGACAGAGCAAAACATAACATTCTGCCC
CTCAGTAAATTTGGATTGATGCAAATTACCCGCCAACGCGTGCGTCCTGCCATGGATGTCAACACGAATGAAACCTGTCC
CACCTGCTTCGGGAAAGGTAGCATAAAGCCATCCATCCTTTTTACGGATACTTTGGAGAGTAAGATTGACTACCTGGTCA
ACAAATTGAAGATAAAGAGATTTACGCTGTACATCCATCCGTACATCGCAGCATATGTGAATCAGGGTCTGGTTTCCCTG
AAGCGCAAATGGCAAATGAAATACGGATTCGGAATAAAGATTATCCCAGACCAAAGTCTGGCCTTCCTGCAATATCGGTT
CACCGATGTTCACGGTGAGGAGATAGACATGAAAGAGGAAATCGAAATCAAGTAA

Upstream 100 bases:

>100_bases
TCTGTGACGACAAATAAAGAACAAACCTTGCAAAGCAACAAAAGTCTTTCAGGTTTGTTCTTTGTTTAATGAGAAAAGTG
AACAATTTAAAAATACAAAA

Downstream 100 bases:

>100_bases
AAGAAAAGGGAGTGATAAAAAATGTCACTCCCTTTCTTTATTTCACTACTCTAATATGCAAGGCTTGATTTCGACGTTTC
ACAAGCTCAAATACCAGTCA

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MTSELVVDVQPKEISIALLEDKALVEFQKEGRSASFNVGNMYLGRVKKLMPGLNACFVDVGFEKDAFLHYLDLGPQFHSY
QKYLKQVLSDRKKLFPITKATMLPDIEKEGTVSTTLQQGQEVIVQIVKEPISTKGPRLTCELSFAGRYLVLIPFNDKVSV
SQKIKSSEERARLKQLLQSIKPKNFGVIVRTVAEGKRVAELDAELKVLLKHWEETITKVQKAPKLPALVYEETSRTVAML
RDLFNPSYENIYVNDETVFHEIKDYVSLIAPERAEIVKLYKGQLPIFDNFGITKQIKSSFGKTISYKSGAYLIIEHTEAL
HVVDVNSGNRSKSANGQEANALDVNLGAADELARQLRLRDMGGIIVVDFIDMNLAENRQKLYERMCQNMQKDRAKHNILP
LSKFGLMQITRQRVRPAMDVNTNETCPTCFGKGSIKPSILFTDTLESKIDYLVNKLKIKRFTLYIHPYIAAYVNQGLVSL
KRKWQMKYGFGIKIIPDQSLAFLQYRFTDVHGEEIDMKEEIEIK

Sequences:

>Translated_524_residues
MTSELVVDVQPKEISIALLEDKALVEFQKEGRSASFNVGNMYLGRVKKLMPGLNACFVDVGFEKDAFLHYLDLGPQFHSY
QKYLKQVLSDRKKLFPITKATMLPDIEKEGTVSTTLQQGQEVIVQIVKEPISTKGPRLTCELSFAGRYLVLIPFNDKVSV
SQKIKSSEERARLKQLLQSIKPKNFGVIVRTVAEGKRVAELDAELKVLLKHWEETITKVQKAPKLPALVYEETSRTVAML
RDLFNPSYENIYVNDETVFHEIKDYVSLIAPERAEIVKLYKGQLPIFDNFGITKQIKSSFGKTISYKSGAYLIIEHTEAL
HVVDVNSGNRSKSANGQEANALDVNLGAADELARQLRLRDMGGIIVVDFIDMNLAENRQKLYERMCQNMQKDRAKHNILP
LSKFGLMQITRQRVRPAMDVNTNETCPTCFGKGSIKPSILFTDTLESKIDYLVNKLKIKRFTLYIHPYIAAYVNQGLVSL
KRKWQMKYGFGIKIIPDQSLAFLQYRFTDVHGEEIDMKEEIEIK
>Mature_523_residues
TSELVVDVQPKEISIALLEDKALVEFQKEGRSASFNVGNMYLGRVKKLMPGLNACFVDVGFEKDAFLHYLDLGPQFHSYQ
KYLKQVLSDRKKLFPITKATMLPDIEKEGTVSTTLQQGQEVIVQIVKEPISTKGPRLTCELSFAGRYLVLIPFNDKVSVS
QKIKSSEERARLKQLLQSIKPKNFGVIVRTVAEGKRVAELDAELKVLLKHWEETITKVQKAPKLPALVYEETSRTVAMLR
DLFNPSYENIYVNDETVFHEIKDYVSLIAPERAEIVKLYKGQLPIFDNFGITKQIKSSFGKTISYKSGAYLIIEHTEALH
VVDVNSGNRSKSANGQEANALDVNLGAADELARQLRLRDMGGIIVVDFIDMNLAENRQKLYERMCQNMQKDRAKHNILPL
SKFGLMQITRQRVRPAMDVNTNETCPTCFGKGSIKPSILFTDTLESKIDYLVNKLKIKRFTLYIHPYIAAYVNQGLVSLK
RKWQMKYGFGIKIIPDQSLAFLQYRFTDVHGEEIDMKEEIEIK

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=470, Percent_Identity=33.8297872340426, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1787325, Length=524, Percent_Identity=31.6793893129771, Blast_Score=263, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 59687; Mature: 59556

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSELVVDVQPKEISIALLEDKALVEFQKEGRSASFNVGNMYLGRVKKLMPGLNACFVDV
CCCCEEEEECCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
GFEKDAFLHYLDLGPQFHSYQKYLKQVLSDRKKLFPITKATMLPDIEKEGTVSTTLQQGQ
CCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHH
EVIVQIVKEPISTKGPRLTCELSFAGRYLVLIPFNDKVSVSQKIKSSEERARLKQLLQSI
HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHC
KPKNFGVIVRTVAEGKRVAELDAELKVLLKHWEETITKVQKAPKLPALVYEETSRTVAML
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
RDLFNPSYENIYVNDETVFHEIKDYVSLIAPERAEIVKLYKGQLPIFDNFGITKQIKSSF
HHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHHH
GKTISYKSGAYLIIEHTEALHVVDVNSGNRSKSANGQEANALDVNLGAADELARQLRLRD
CCEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHC
MGGIIVVDFIDMNLAENRQKLYERMCQNMQKDRAKHNILPLSKFGLMQITRQRVRPAMDV
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
NTNETCPTCFGKGSIKPSILFTDTLESKIDYLVNKLKIKRFTLYIHPYIAAYVNQGLVSL
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHH
KRKWQMKYGFGIKIIPDQSLAFLQYRFTDVHGEEIDMKEEIEIK
HHHHHHEECCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSELVVDVQPKEISIALLEDKALVEFQKEGRSASFNVGNMYLGRVKKLMPGLNACFVDV
CCCEEEEECCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
GFEKDAFLHYLDLGPQFHSYQKYLKQVLSDRKKLFPITKATMLPDIEKEGTVSTTLQQGQ
CCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHH
EVIVQIVKEPISTKGPRLTCELSFAGRYLVLIPFNDKVSVSQKIKSSEERARLKQLLQSI
HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHC
KPKNFGVIVRTVAEGKRVAELDAELKVLLKHWEETITKVQKAPKLPALVYEETSRTVAML
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
RDLFNPSYENIYVNDETVFHEIKDYVSLIAPERAEIVKLYKGQLPIFDNFGITKQIKSSF
HHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHHH
GKTISYKSGAYLIIEHTEALHVVDVNSGNRSKSANGQEANALDVNLGAADELARQLRLRD
CCEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHC
MGGIIVVDFIDMNLAENRQKLYERMCQNMQKDRAKHNILPLSKFGLMQITRQRVRPAMDV
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
NTNETCPTCFGKGSIKPSILFTDTLESKIDYLVNKLKIKRFTLYIHPYIAAYVNQGLVSL
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHH
KRKWQMKYGFGIKIIPDQSLAFLQYRFTDVHGEEIDMKEEIEIK
HHHHHHEECCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]