| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yuxL [H]
Identifier: 150006563
GI number: 150006563
Start: 5025013
End: 5027463
Strand: Reverse
Name: yuxL [H]
Synonym: BVU_4083
Alternate gene names: 150006563
Gene position: 5027463-5025013 (Counterclockwise)
Preceding gene: 150006564
Following gene: 150006560
Centisome position: 97.37
GC content: 46.59
Gene sequence:
>2451_bases ATGAAGAAACAAATCTTATTGTCTTGTGCACTTGCCTGGGCTGTGATGGCAGGTGCTGAAACGATTGACATTACTACTTT CCGTTATGCCGGCCCCTACGTTGTACAGGCCCCTTTTCAGGTGGACAGCGTGGATGTGAATTCAAAGACTTTTGTATCCG GACGTCTGTTGGACACTCATCTTTCTGTGGACGTATTGCAACAGGGAACTTTATTTACAGGCGGGGTTTTGCCGGGAAGT GACTCGGGATATGCCTTGCACATGATGGGTTTTGTGTTGGAGAATACTCGTTATGCCACAGCCAAGCTGAAGATTGACGG GCTGAAAAGATACCAGCTTTATGTAGATGGAAAGAAGCAGGAAGGAACTGAACTCGCTTTGGAGCCGGCCACCCATTCTG TAGTTATTAAATATCTTTCTGAAGCAGGGAAAACAGATTCCTTGAAAGTGAGTGTGGATACGGATCAAGAGGGAAGCATT TCACTTAAGCAAGATAACAAAAAGCTATATACTTTGGCGGATGTGTTGCATGGAACTCGTTTTGCCGGAGTAGGGCTTTC CCCTGATGGCAGATATTTGATTGCCAATTATCGTACGACTTATGTAGGTGGTCGGTCAGCCGGTAGTACGCGCATTACTG AACTTGCCAGCGGTAAGGTTTTGGCGGAGCGTACTGAAAATATGCAATGGATGCCTCGTTCTAACCGTTATTATTATACC CGTACGGGGGTGGATGGCAGGCAGCTGATAGTTGTGGATCCGCTTACCGGAATGGAAACTGTGCTGGTGAATAAATTACC TGACGGGTATTTCCAGTTCGCACCTACGGAAGACTACCTGCTTTTCACCATGACCCAGGAAGGTCCGAAAGAACGTAAAG AAATTTATGAGGTCCTGGAACCGGATGATCGCCAGCCGGGGTGGCGTAACCGTTCTTATCTGGCTAAATATGATTTGAAG ACCGGTTTGTTGCAGCCACTGACTTTCGGTTATCACAATGTCTGGGCTGCCGATATTTCCAATGACGGCCGGTATCTTTT GATGATGACCAGTCAGAGCCGTCTGACCAAGCGTCCTACTACTTTATTCTCACTATATCGGTTGGATATGCAGACTTTAC AGGCGGAACTGCTGATAGATAAAGATGGTTTTATCAGTGGAGCCCGTTTTTCACCTGACGGAACGCAGGTATTGGTATCC GGCTCGCCTGAATCGCTGGGTGGAATAGGGAAAAATGTAAAGGAGGGGCAGACTCCGAGTATGACGGACGGTCAGCTTTA TTTGCTGAATATAGCTGATAAGAGAGTCACTCCGCTGACGAAAGATTTTAATCCCAGCGTACAGCGTGCCGTGTGGAATA AGGCCGACGGGCAAATATATTTCACGGCCGAGAACCGTGACTGTTACAGTTTGTACCGGATGAATCCCGCTGATGGGAAA ATTCAGCAACTGGAGGTTTCAGAAGATTTGGTCAACTCATTCTCATTGGCGCAAAATGCTCCGGTTATGGTCTATTATGG ACAGAGCGCCTCAAATTCCGACCGTTTATACACCATGAATACCAAAAAGATGAAATCATCTTTGTTGGAAGACTTAAGTA AAGACATATTGAAAGATGTGGAGCTGGGCGAATGCAAGGCCTGGAGTTTTACCAATTCTCGTGGTGATACCATTTATGGT CGTTATTACCTGCCGCCTCATTTTGACGCCAACCGGAAATATCCTATGATTGTGAATTATTATGGTGGGTGCAGTCCGGT CAGCCGTAATTTCGAAAGCCGTTATCCGCATCATGCATACGCGGCATTGGGCTATGTGGTGTATGTGATAGAACCTAGCG GTGCTACCGGTTTCGGACAGGAATTTTCTGCCCGCCACGTCAATACAGCTGGGGAAGGGGTGGCACAGGATATCATAGAA GGTACAAAGCAGTTTTGTAAAGAACATGCTTTTGTCAATGACAAGAAAATAGGCTGTATAGGTGCATCCTATGGCGGCTT CATGACACAATACCTGCAAACACAGACCGATATTTTTGCAGCGGCCATCTCTCATGCCGGTATCAGTGATCATACCAGTT ATTGGGGGGAAGGATATTGGGGATATTCGTACAGTGAAGTTTCCATGGCGAATAGTTATCCGTGGAGCAATCCTGATCTT TTTGTAAAACAAAGCCCGTTGTTCAATGCGGACAAGATACATACGCCTTTGCTGTTCTTGCACGGTGATGCGGATGTGAA TGTACCGGTGGGAGAGAGCATTCAGATGTTTACAGCACTGAAGTTACTGGGGCGCGAAACGGCTTTTGTGGCTGTAACGG GACAAGATCATCATATAGTGGATTATGGCAAGAGGATTCAGTGGCAGAACACGATTTTTGCCTGGTTTGCCAAATGGTTG CAGGATGATGCGACTTGGTGGAACGCTATTTATAAGCCGAAGGCTTTATAG
Upstream 100 bases:
>100_bases GAGGTGAAATAATATGTTGTAGGAAGCATTGAAAATCGTAGGAAAAGGTTTTTGTTTCTTTTATATTTCGTATCTTTGTG TAACACAAATTGTTAGAAAT
Downstream 100 bases:
>100_bases ATGAATAATAAAAGAAGGTGCGTCGTAATGTGAACTGCACCTTCTTTTTATGTTTGTTATACCGATTCATTGATAATTTC CCAGCCATTAATTTTTATAC
Product: putative alanyl dipeptidyl peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTHLSVDVLQQGTLFTGGVLPGS DSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQEGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSI SLKQDNKKLYTLADVLHGTRFAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLEPDDRQPGWRNRSYLAKYDLK TGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS GSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDVELGECKAWSFTNSRGDTIYG RYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAYAALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIE GTKQFCKEHAFVNDKKIGCIGASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIVDYGKRIQWQNTIFAWFAKWL QDDATWWNAIYKPKAL
Sequences:
>Translated_816_residues MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTHLSVDVLQQGTLFTGGVLPGS DSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQEGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSI SLKQDNKKLYTLADVLHGTRFAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLEPDDRQPGWRNRSYLAKYDLK TGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS GSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDVELGECKAWSFTNSRGDTIYG RYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAYAALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIE GTKQFCKEHAFVNDKKIGCIGASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIVDYGKRIQWQNTIFAWFAKWL QDDATWWNAIYKPKAL >Mature_816_residues MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTHLSVDVLQQGTLFTGGVLPGS DSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQEGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSI SLKQDNKKLYTLADVLHGTRFAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLEPDDRQPGWRNRSYLAKYDLK TGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS GSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDVELGECKAWSFTNSRGDTIYG RYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAYAALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIE GTKQFCKEHAFVNDKKIGCIGASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIVDYGKRIQWQNTIFAWFAKWL QDDATWWNAIYKPKAL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI18450280, Length=286, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI37577089, Length=286, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI18765694, Length=272, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI16933540, Length=235, Percent_Identity=25.9574468085106, Blast_Score=69, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17552908, Length=240, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324793, Length=253, Percent_Identity=28.4584980237154, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI45550825, Length=212, Percent_Identity=25.4716981132075, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI45553511, Length=212, Percent_Identity=25.4716981132075, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI45551969, Length=212, Percent_Identity=25.4716981132075, Blast_Score=68, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 91297; Mature: 91297
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTH CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCEECEEECCCEEEEECEEEEEE LSVDVLQQGTLFTGGVLPGSDSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQ CCHHHHCCCCEEECCCCCCCCCCEEEEEEEEHHCCCEEEEEEEEECCCEEEEEEECCCCC EGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSISLKQDNKKLYTLADVLHGTR CCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEHHHHHCCCE FAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT EEECCCCCCCCEEEEECEEEEECCCCCCCCCHHHHHCCCEEEHHCCCCEECCCCCCEEEE RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLE ECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHC PDDRQPGWRNRSYLAKYDLKTGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPT CCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEECCCHHHCCCH TLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPS HHHHHHHHHHHHHEEEEEECCCCCEECCEECCCCCEEEEECCCHHHCCCCCCCCCCCCCC MTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCC IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDV EEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC ELGECKAWSFTNSRGDTIYGRYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAY CCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCHHHCCCCHHH AALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIEGTKQFCKEHAFVNDKKIGCI EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE GASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCE FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIV EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE DYGKRIQWQNTIFAWFAKWLQDDATWWNAIYKPKAL ECCCEEEECHHHHHHHHHHHHCCCHHHHHCCCCCCC >Mature Secondary Structure MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTH CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCEECEEECCCEEEEECEEEEEE LSVDVLQQGTLFTGGVLPGSDSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQ CCHHHHCCCCEEECCCCCCCCCCEEEEEEEEHHCCCEEEEEEEEECCCEEEEEEECCCCC EGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSISLKQDNKKLYTLADVLHGTR CCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEHHHHHCCCE FAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT EEECCCCCCCCEEEEECEEEEECCCCCCCCCHHHHHCCCEEEHHCCCCEECCCCCCEEEE RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLE ECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHC PDDRQPGWRNRSYLAKYDLKTGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPT CCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEECCCHHHCCCH TLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPS HHHHHHHHHHHHHEEEEEECCCCCEECCEECCCCCEEEEECCCHHHCCCCCCCCCCCCCC MTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCC IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDV EEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC ELGECKAWSFTNSRGDTIYGRYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAY CCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCHHHCCCCHHH AALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIEGTKQFCKEHAFVNDKKIGCI EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE GASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCE FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIV EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE DYGKRIQWQNTIFAWFAKWLQDDATWWNAIYKPKAL ECCCEEEECHHHHHHHHHHHHCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]