| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006562
Identifier: 150006562
GI number: 150006562
Start: 5024051
End: 5024956
Strand: Direct
Name: 150006562
Synonym: BVU_4082
Alternate gene names: NA
Gene position: 5024051-5024956 (Clockwise)
Preceding gene: 150006561
Following gene: 150006566
Centisome position: 97.31
GC content: 35.98
Gene sequence:
>906_bases ATGAAAATCAGATTGAAACTGGCATCTCTTGTTCTGTTGTTATTTGTTCTAACCAATTGCATTAAAGAGAATGAATGTTG CTGTTCTCAGGACTATACAGTCCTGGGACTCAAATTCCGCTACGCAACAAACAAAAGCATACATCAGCAAACAGAGTTCC CTCCAAACGCCATGCTGGCTGTTTTTATTTTTGATGACAAAGGAACATTCGTTTCCCAAATAAATGACTCATTAAATCAA GTTAATGACGACTACACCATGAAACTGCCTTTCAAACAAGGCAGCTATCAATTCGTAGCCTGGACAGGTTATGATGAAAC CTGTTACCAATTGTCCGCATGCATTCCACAACAGACTGACATACACGATTTCTTTTTATCTCTGAAACGTGAAAAAGACA ATCAAACTATCAACCAGCCTAGTCTGCTCTATCATGGAATACATGACATTGTGAAAATCAGAGAAGGAAAAGAAAACATT GTATGGATTGACTTAAAACAAATCACCAACCATATCCAAGTTATCGTCCATAATTTGAATGATAAAAAGAAACATATCAT CTATATTGAAGACAACAATGGGAAATATGACTCTTTCTTGCAGTATGCCGATGATGAAAAAATTACTTATCTTCCCACCT ACTCAAATCCATCAAACACCACATCTTCTCTCATAGCCGATTTCACGGTAATGAAGCTGGATAAAAACAGAGAGCCACGA CTGAAGATTTCAGATGATACAGGAGTCATCCGTTATGATGAAAATCTTATAGGCAAACTGCTGCAAAAAAAACCTTACAT TGATTTCGACTACAATCATGACTTTACCATTGAAATATCATTCAACGATTATATTCCTGTGAGTATAAAAATTAATGGCT GGGAAATTATCAATGAATCGGTATAA
Upstream 100 bases:
>100_bases AGCCTAACACATGGATCAGTGCAGATATAGAAGTCATTCCATGGGAAGTAATAGAGGAAGACCATGATCTATAAATGGGT AATAATTATTCATTAACAAA
Downstream 100 bases:
>100_bases CAAACATAAAAAGAAGGTGCAGTTCACATTACGACGCACCTTCTTTTATTATTCATCTATAAAGCCTTCGGCTTATAAAT AGCGTTCCACCAAGTCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKIRLKLASLVLLLFVLTNCIKENECCCSQDYTVLGLKFRYATNKSIHQQTEFPPNAMLAVFIFDDKGTFVSQINDSLNQ VNDDYTMKLPFKQGSYQFVAWTGYDETCYQLSACIPQQTDIHDFFLSLKREKDNQTINQPSLLYHGIHDIVKIREGKENI VWIDLKQITNHIQVIVHNLNDKKKHIIYIEDNNGKYDSFLQYADDEKITYLPTYSNPSNTTSSLIADFTVMKLDKNREPR LKISDDTGVIRYDENLIGKLLQKKPYIDFDYNHDFTIEISFNDYIPVSIKINGWEIINESV
Sequences:
>Translated_301_residues MKIRLKLASLVLLLFVLTNCIKENECCCSQDYTVLGLKFRYATNKSIHQQTEFPPNAMLAVFIFDDKGTFVSQINDSLNQ VNDDYTMKLPFKQGSYQFVAWTGYDETCYQLSACIPQQTDIHDFFLSLKREKDNQTINQPSLLYHGIHDIVKIREGKENI VWIDLKQITNHIQVIVHNLNDKKKHIIYIEDNNGKYDSFLQYADDEKITYLPTYSNPSNTTSSLIADFTVMKLDKNREPR LKISDDTGVIRYDENLIGKLLQKKPYIDFDYNHDFTIEISFNDYIPVSIKINGWEIINESV >Mature_301_residues MKIRLKLASLVLLLFVLTNCIKENECCCSQDYTVLGLKFRYATNKSIHQQTEFPPNAMLAVFIFDDKGTFVSQINDSLNQ VNDDYTMKLPFKQGSYQFVAWTGYDETCYQLSACIPQQTDIHDFFLSLKREKDNQTINQPSLLYHGIHDIVKIREGKENI VWIDLKQITNHIQVIVHNLNDKKKHIIYIEDNNGKYDSFLQYADDEKITYLPTYSNPSNTTSSLIADFTVMKLDKNREPR LKISDDTGVIRYDENLIGKLLQKKPYIDFDYNHDFTIEISFNDYIPVSIKINGWEIINESV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35069; Mature: 35069
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRLKLASLVLLLFVLTNCIKENECCCSQDYTVLGLKFRYATNKSIHQQTEFPPNAMLA CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCEEE VFIFDDKGTFVSQINDSLNQVNDDYTMKLPFKQGSYQFVAWTGYDETCYQLSACIPQQTD EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCC IHDFFLSLKREKDNQTINQPSLLYHGIHDIVKIREGKENIVWIDLKQITNHIQVIVHNLN HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHEEEEECCC DKKKHIIYIEDNNGKYDSFLQYADDEKITYLPTYSNPSNTTSSLIADFTVMKLDKNREPR CCCEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHEEEEEEECCCCCCC LKISDDTGVIRYDENLIGKLLQKKPYIDFDYNHDFTIEISFNDYIPVSIKINGWEIINES EEECCCCCEEEECHHHHHHHHHCCCCEEECCCCCEEEEEEECCEEEEEEEECCEEEECCC V C >Mature Secondary Structure MKIRLKLASLVLLLFVLTNCIKENECCCSQDYTVLGLKFRYATNKSIHQQTEFPPNAMLA CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCEEE VFIFDDKGTFVSQINDSLNQVNDDYTMKLPFKQGSYQFVAWTGYDETCYQLSACIPQQTD EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCC IHDFFLSLKREKDNQTINQPSLLYHGIHDIVKIREGKENIVWIDLKQITNHIQVIVHNLN HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHEEEEECCC DKKKHIIYIEDNNGKYDSFLQYADDEKITYLPTYSNPSNTTSSLIADFTVMKLDKNREPR CCCEEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHEEEEEEECCCCCCC LKISDDTGVIRYDENLIGKLLQKKPYIDFDYNHDFTIEISFNDYIPVSIKINGWEIINES EEECCCCCEEEECHHHHHHHHHCCCCEEECCCCCEEEEEEECCEEEEEEEECCEEEECCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA