| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006472
Identifier: 150006472
GI number: 150006472
Start: 4910249
End: 4911946
Strand: Direct
Name: 150006472
Synonym: BVU_3991
Alternate gene names: NA
Gene position: 4910249-4911946 (Clockwise)
Preceding gene: 150006471
Following gene: 150006474
Centisome position: 95.1
GC content: 44.29
Gene sequence:
>1698_bases ATGGATACACAAGAAAAAATTATTATCTATCAGGTATTCACCCGTTTATTCGGGAACAACAGCCTGCGTTGTAAGCCTAA TGGTTCTTTGGAGGAAAACGGTTGCGGAAAAATGGCCGATTTCACGACAAAGGCTTTAAACGAGATCAAAACACTGGGTG CTACACATATTTGGTATACAGGTATCATTGAACATGCTACCCAAACCAATTATACCCGCTATGGCATCAAACCCGATCAT CCCGCAGTAGTAAAAGGAAAGGCCGGATCACCGTATGCCATCAAGGATTATTATGATGTAGACCCTGATTTGGCAACCAG TATCCCGGACCGTATGAAAGAGTTCGAGAATCTGGTAACACGAAGCCACAAAGCCGGATTGAAGGTCATCATTGATTTTG TCCCCAACCATGTAGCCCGCCAATATGGTTCAGACGCCAAGCCTGAAGGAGTAACCGATTTGGGTGAGAAAGATGATGTG ACAAAAGCTTTCAGCCCCAACAATAATTTCTATTATATTCCCGATACAAAGCTGGAAGGCAATATTGACCTGCACCGTGG CGCAGCGGAACCTTACATAGAGTTTCCGGCAAAAGCAACCGGTAATGACCGTTTTGACGCATGGCCCAACTCCAATGACT GGTATGAAACTGTGAAACTGAATTATGGTATAGACTACTTGAACGGTCATAGCCGCCACTTCGAACCGATTCCGGACACA TGGGTGAAGATGCGTGACATCCTACTGTTCTGGTCTGCCAAAGGCATTGACGGATTCCGCTGTGATATGGCAGAAATGGT TCCTGTAGAATTCTGGGGATGGGTGATTCCGCAAATCAAAGCTGAACATCCGAAACTGATCTTTATCGCCGAGGTCTATA ATCCGGGAGAATACAGAAATTATCTGTTCAATGGCAAATTCGACTATTTATATGACAAAGTAGGTCTGTATGATACACTA CGTGCCATTACCTGCGGATGGGAATCGGCAACTGCTATTCCACAACGCTGGCAAAGCTTGGGAGGTATTGAAAAACGAAT GCTCAATTTCCTGGAAAATCATGACGAGCAGCGCATAGCTTCCGATTATTTTGCCGGAAACGGCTCAAAAGCCATCCCCG CAATGATTGTATCGGCTTGCATGAATACCAATCCGGTCATGATTTACTTCGGGCAGGAATTGGGAGAACATGGCATGGAT ACGGAAGGTTTCAGCGGGCGTGACGGAAGAACTACCATCTTTGATTACTGGAGTGTGGACAGCATACGCCGCTGGCGCAA TGGAGGCAAGTTTGACAATAAATTCCTGAATGAGGATGAAAAGCAATTGAAACAATTCTATACCCGTCTGCTGAATATAT GCAACAGTGAAAAAGCCATACGGGAAGGTGTGTTCTTTGACTTAACCTATGCCAATCTGGCCGGATGGGTATTTAACGAA CATAAACAATACGCCTTTTTACGAAAACAGGATGATGAACTGATATTAATTATGGTTAACTTTGACTCCATACCGGCACG TTCAGCCGTCAATATTCCGCAACATGCGTTTGATTATTTAGGCATCCATCGTTATGGAGAATATGAGGCAACCGAATTGC TGACCGGAAACACAGAGAAGCTGACTCTTATGCCGGACAAAACAACTCCCGTATTACTAGATGGAATGAATGGAAAAATT CTGAAATTCAAGCTATAG
Upstream 100 bases:
>100_bases CGAAGAGATATTCGAAAAAGGATACAATACGGCAACGGAACTCCTGGACAGACTACTCCTGGAGAATGGAACAATTTGGA GATAAACAAAAAAAAATAAA
Downstream 100 bases:
>100_bases TTTCCCACCACAGATTACTCAGATTAACACAGATACAGATTGAAATAAGCAATAAATCGTATTTCAATCTGTGTAATCTG TGGTAAAAAACATTTTAACT
Product: glycoside hydrolase family alpha-glucosidase
Products: NA
Alternate protein names: Glycosidase; Alpha-Amylase Family Protein; Alpha Amylase; Alpha-Amylase; Pullulanase; Glycoside Hydrolase Family Alpha-Glucosidase; Alpha Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Carbohydrate Debranching Protein; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain-Containing Protein; LOW QUALITY PROTEIN Alpha-Amylase Family Protein
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MDTQEKIIIYQVFTRLFGNNSLRCKPNGSLEENGCGKMADFTTKALNEIKTLGATHIWYTGIIEHATQTNYTRYGIKPDH PAVVKGKAGSPYAIKDYYDVDPDLATSIPDRMKEFENLVTRSHKAGLKVIIDFVPNHVARQYGSDAKPEGVTDLGEKDDV TKAFSPNNNFYYIPDTKLEGNIDLHRGAAEPYIEFPAKATGNDRFDAWPNSNDWYETVKLNYGIDYLNGHSRHFEPIPDT WVKMRDILLFWSAKGIDGFRCDMAEMVPVEFWGWVIPQIKAEHPKLIFIAEVYNPGEYRNYLFNGKFDYLYDKVGLYDTL RAITCGWESATAIPQRWQSLGGIEKRMLNFLENHDEQRIASDYFAGNGSKAIPAMIVSACMNTNPVMIYFGQELGEHGMD TEGFSGRDGRTTIFDYWSVDSIRRWRNGGKFDNKFLNEDEKQLKQFYTRLLNICNSEKAIREGVFFDLTYANLAGWVFNE HKQYAFLRKQDDELILIMVNFDSIPARSAVNIPQHAFDYLGIHRYGEYEATELLTGNTEKLTLMPDKTTPVLLDGMNGKI LKFKL
Sequences:
>Translated_565_residues MDTQEKIIIYQVFTRLFGNNSLRCKPNGSLEENGCGKMADFTTKALNEIKTLGATHIWYTGIIEHATQTNYTRYGIKPDH PAVVKGKAGSPYAIKDYYDVDPDLATSIPDRMKEFENLVTRSHKAGLKVIIDFVPNHVARQYGSDAKPEGVTDLGEKDDV TKAFSPNNNFYYIPDTKLEGNIDLHRGAAEPYIEFPAKATGNDRFDAWPNSNDWYETVKLNYGIDYLNGHSRHFEPIPDT WVKMRDILLFWSAKGIDGFRCDMAEMVPVEFWGWVIPQIKAEHPKLIFIAEVYNPGEYRNYLFNGKFDYLYDKVGLYDTL RAITCGWESATAIPQRWQSLGGIEKRMLNFLENHDEQRIASDYFAGNGSKAIPAMIVSACMNTNPVMIYFGQELGEHGMD TEGFSGRDGRTTIFDYWSVDSIRRWRNGGKFDNKFLNEDEKQLKQFYTRLLNICNSEKAIREGVFFDLTYANLAGWVFNE HKQYAFLRKQDDELILIMVNFDSIPARSAVNIPQHAFDYLGIHRYGEYEATELLTGNTEKLTLMPDKTTPVLLDGMNGKI LKFKL >Mature_565_residues MDTQEKIIIYQVFTRLFGNNSLRCKPNGSLEENGCGKMADFTTKALNEIKTLGATHIWYTGIIEHATQTNYTRYGIKPDH PAVVKGKAGSPYAIKDYYDVDPDLATSIPDRMKEFENLVTRSHKAGLKVIIDFVPNHVARQYGSDAKPEGVTDLGEKDDV TKAFSPNNNFYYIPDTKLEGNIDLHRGAAEPYIEFPAKATGNDRFDAWPNSNDWYETVKLNYGIDYLNGHSRHFEPIPDT WVKMRDILLFWSAKGIDGFRCDMAEMVPVEFWGWVIPQIKAEHPKLIFIAEVYNPGEYRNYLFNGKFDYLYDKVGLYDTL RAITCGWESATAIPQRWQSLGGIEKRMLNFLENHDEQRIASDYFAGNGSKAIPAMIVSACMNTNPVMIYFGQELGEHGMD TEGFSGRDGRTTIFDYWSVDSIRRWRNGGKFDNKFLNEDEKQLKQFYTRLLNICNSEKAIREGVFFDLTYANLAGWVFNE HKQYAFLRKQDDELILIMVNFDSIPARSAVNIPQHAFDYLGIHRYGEYEATELLTGNTEKLTLMPDKTTPVLLDGMNGKI LKFKL
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI45549022, Length=253, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64711; Mature: 64711
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQEKIIIYQVFTRLFGNNSLRCKPNGSLEENGCGKMADFTTKALNEIKTLGATHIWYT CCCCHHEHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH GIIEHATQTNYTRYGIKPDHPAVVKGKAGSPYAIKDYYDVDPDLATSIPDRMKEFENLVT HHHHHHCCCCCEEECCCCCCCCEEECCCCCCEEECCCCCCCCHHHHCCHHHHHHHHHHHH RSHKAGLKVIIDFVPNHVARQYGSDAKPEGVTDLGEKDDVTKAFSPNNNFYYIPDTKLEG HHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC NIDLHRGAAEPYIEFPAKATGNDRFDAWPNSNDWYETVKLNYGIDYLNGHSRHFEPIPDT CEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCHH WVKMRDILLFWSAKGIDGFRCDMAEMVPVEFWGWVIPQIKAEHPKLIFIAEVYNPGEYRN HHHHHHEEEEEECCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHC YLFNGKFDYLYDKVGLYDTLRAITCGWESATAIPQRWQSLGGIEKRMLNFLENHDEQRIA EEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH SDYFAGNGSKAIPAMIVSACMNTNPVMIYFGQELGEHGMDTEGFSGRDGRTTIFDYWSVD HHHHCCCCCCHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCCCCCCEEEEEECCHH SIRRWRNGGKFDNKFLNEDEKQLKQFYTRLLNICNSEKAIREGVFFDLTYANLAGWVFNE HHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEHHHHHHHHHHC HKQYAFLRKQDDELILIMVNFDSIPARSAVNIPQHAFDYLGIHRYGEYEATELLTGNTEK CHHEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCCCE LTLMPDKTTPVLLDGMNGKILKFKL EEEECCCCCCEEEECCCCCEEEEEC >Mature Secondary Structure MDTQEKIIIYQVFTRLFGNNSLRCKPNGSLEENGCGKMADFTTKALNEIKTLGATHIWYT CCCCHHEHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH GIIEHATQTNYTRYGIKPDHPAVVKGKAGSPYAIKDYYDVDPDLATSIPDRMKEFENLVT HHHHHHCCCCCEEECCCCCCCCEEECCCCCCEEECCCCCCCCHHHHCCHHHHHHHHHHHH RSHKAGLKVIIDFVPNHVARQYGSDAKPEGVTDLGEKDDVTKAFSPNNNFYYIPDTKLEG HHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC NIDLHRGAAEPYIEFPAKATGNDRFDAWPNSNDWYETVKLNYGIDYLNGHSRHFEPIPDT CEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCHH WVKMRDILLFWSAKGIDGFRCDMAEMVPVEFWGWVIPQIKAEHPKLIFIAEVYNPGEYRN HHHHHHEEEEEECCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHC YLFNGKFDYLYDKVGLYDTLRAITCGWESATAIPQRWQSLGGIEKRMLNFLENHDEQRIA EEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH SDYFAGNGSKAIPAMIVSACMNTNPVMIYFGQELGEHGMDTEGFSGRDGRTTIFDYWSVD HHHHCCCCCCHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCCCCCCEEEEEECCHH SIRRWRNGGKFDNKFLNEDEKQLKQFYTRLLNICNSEKAIREGVFFDLTYANLAGWVFNE HHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEHHHHHHHHHHC HKQYAFLRKQDDELILIMVNFDSIPARSAVNIPQHAFDYLGIHRYGEYEATELLTGNTEK CHHEEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCCCE LTLMPDKTTPVLLDGMNGKILKFKL EEEECCCCCCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA