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The map label for this gene is ylbK [H]

Identifier: 150006471

GI number: 150006471

Start: 4909448

End: 4910233

Strand: Direct

Name: ylbK [H]

Synonym: BVU_3990

Alternate gene names: 150006471

Gene position: 4909448-4910233 (Clockwise)

Preceding gene: 150006470

Following gene: 150006472

Centisome position: 95.09

GC content: 42.11

Gene sequence:

>786_bases
ATGAATGAATTTAAATATAACATTGGTTATGCCCTGAGCGGAGGATTTATAAAAGGATTTGCCCATTTGGGGATTATGCA
GGCTTTGCATGAACATGGCATCAGGCCGGAAATACTTTCCGGAGTAAGTGCAGGTGCTCTTGCCGCTGTCTTCTATGCCG
ACGGCAAAGAGCCTTATCATATTGTTGAACTTTTTGAGCACCATTCATTCAAAGAACTGACCACTTTTTCTATCAACAAA
CAAGGTCTGCTGAAACTGGATAGTTTTATCGATTTCTTAAACAGCAACTTGGAGTCGAAAACGATAGAAGAACTAAAAAT
TCCCACTATTATTACCGCCACCGATTTGGATCACGGACGCATCGTTTCTTTTAAAAAAGGGAAAATAGCCGAAAGACTGG
CTGCTTCCTGCTGTATGCCTATCTTGTTTGCCCCCATACGCATCAACAATACATATTATGTAGATGGAGGAATCTTGATG
AACCTGCCGGTCAGCCCCATTCGCAAAGAATGCGAGAAAGTGATAGCACTCAATGTAGATCCGCTGGTAGCAGATGAATA
TAGCAAGAATGTGGTAAGCATCGCACTCAGAGCCTATCATTTTATTTTCCAAGCCAATACACTGCCTCAAAAAGGGATTG
CAGATTTGCTGATCGAATCATACGGACTGGAAGAATACAGCAACAGAGAACTGGAAAGAGCCGAAGAGATATTCGAAAAA
GGATACAATACGGCAACGGAACTCCTGGACAGACTACTCCTGGAGAATGGAACAATTTGGAGATAA

Upstream 100 bases:

>100_bases
TTTATACGGATTACCGGAATATGCTGAGTAATCCGTATTTTTTTTATGGCATTTCACAAAAATATTCGTAAGTTTGTCGA
TATCTAAACGAGATCAGACT

Downstream 100 bases:

>100_bases
ACAAAAAAAAATAAAATGGATACACAAGAAAAAATTATTATCTATCAGGTATTCACCCGTTTATTCGGGAACAACAGCCT
GCGTTGTAAGCCTAATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNEFKYNIGYALSGGFIKGFAHLGIMQALHEHGIRPEILSGVSAGALAAVFYADGKEPYHIVELFEHHSFKELTTFSINK
QGLLKLDSFIDFLNSNLESKTIEELKIPTIITATDLDHGRIVSFKKGKIAERLAASCCMPILFAPIRINNTYYVDGGILM
NLPVSPIRKECEKVIALNVDPLVADEYSKNVVSIALRAYHFIFQANTLPQKGIADLLIESYGLEEYSNRELERAEEIFEK
GYNTATELLDRLLLENGTIWR

Sequences:

>Translated_261_residues
MNEFKYNIGYALSGGFIKGFAHLGIMQALHEHGIRPEILSGVSAGALAAVFYADGKEPYHIVELFEHHSFKELTTFSINK
QGLLKLDSFIDFLNSNLESKTIEELKIPTIITATDLDHGRIVSFKKGKIAERLAASCCMPILFAPIRINNTYYVDGGILM
NLPVSPIRKECEKVIALNVDPLVADEYSKNVVSIALRAYHFIFQANTLPQKGIADLLIESYGLEEYSNRELERAEEIFEK
GYNTATELLDRLLLENGTIWR
>Mature_261_residues
MNEFKYNIGYALSGGFIKGFAHLGIMQALHEHGIRPEILSGVSAGALAAVFYADGKEPYHIVELFEHHSFKELTTFSINK
QGLLKLDSFIDFLNSNLESKTIEELKIPTIITATDLDHGRIVSFKKGKIAERLAASCCMPILFAPIRINNTYYVDGGILM
NLPVSPIRKECEKVIALNVDPLVADEYSKNVVSIALRAYHFIFQANTLPQKGIADLLIESYGLEEYSNRELERAEEIFEK
GYNTATELLDRLLLENGTIWR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI226510936, Length=184, Percent_Identity=29.8913043478261, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29316; Mature: 29316

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFKYNIGYALSGGFIKGFAHLGIMQALHEHGIRPEILSGVSAGALAAVFYADGKEPYH
CCCEEEECCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHEEEEEECCCCCHH
IVELFEHHSFKELTTFSINKQGLLKLDSFIDFLNSNLESKTIEELKIPTIITATDLDHGR
HHHHHHHCCHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCE
IVSFKKGKIAERLAASCCMPILFAPIRINNTYYVDGGILMNLPVSPIRKECEKVIALNVD
EEEECCCHHHHHHHHHHHHHHHHEEEEECCEEEECCCEEEECCCHHHHHHHHHHHHCCCC
PLVADEYSKNVVSIALRAYHFIFQANTLPQKGIADLLIESYGLEEYSNRELERAEEIFEK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHC
GYNTATELLDRLLLENGTIWR
CCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNEFKYNIGYALSGGFIKGFAHLGIMQALHEHGIRPEILSGVSAGALAAVFYADGKEPYH
CCCEEEECCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHEEEEEECCCCCHH
IVELFEHHSFKELTTFSINKQGLLKLDSFIDFLNSNLESKTIEELKIPTIITATDLDHGR
HHHHHHHCCHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCCE
IVSFKKGKIAERLAASCCMPILFAPIRINNTYYVDGGILMNLPVSPIRKECEKVIALNVD
EEEECCCHHHHHHHHHHHHHHHHEEEEECCEEEECCCEEEECCCHHHHHHHHHHHHCCCC
PLVADEYSKNVVSIALRAYHFIFQANTLPQKGIADLLIESYGLEEYSNRELERAEEIFEK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHC
GYNTATELLDRLLLENGTIWR
CCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]